RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
TRIM50-201ENST00000333149 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
TRIM50-201ENST00000333149 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
TRIM50-201ENST00000333149 E9PCH4 1651 aa24.28■■□□□ 1.48
TRIM50-201ENST00000333149 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIM50-201ENST00000333149 BRD4O60885 1362 aaPredicted RBP24.27■■□□□ 1.48
TRIM50-201ENST00000333149 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
TRIM50-201ENST00000333149 PREX2Q70Z35 1606 aa24.27■■□□□ 1.48
TRIM50-201ENST00000333149 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 ST20-MTHFSA0A0A6YYL1 179 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 RALBP1Q15311 655 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
TRIM50-201ENST00000333149 TMC1Q8TDI8 760 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
TRIM50-201ENST00000333149 NPM1P06748 294 aaKnown RBP eCLIP24.23■■□□□ 1.47
TRIM50-201ENST00000333149 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
TRIM50-201ENST00000333149 MAST1Q9Y2H9 1570 aa24.23■■□□□ 1.47
TRIM50-201ENST00000333149 MYBBP1AQ9BQG0 1328 aaKnown RBP24.23■■□□□ 1.47
TRIM50-201ENST00000333149 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
TRIM50-201ENST00000333149 TRPM1Q7Z4N2 1603 aa24.21■■□□□ 1.47
TRIM50-201ENST00000333149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.47
TRIM50-201ENST00000333149 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.47
TRIM50-201ENST00000333149 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
TRIM50-201ENST00000333149 UNC13BO14795 1591 aa24.19■■□□□ 1.46
TRIM50-201ENST00000333149 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
TRIM50-201ENST00000333149 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
TRIM50-201ENST00000333149 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 LAMC1P11047 1609 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
TRIM50-201ENST00000333149 PLA2R1Q13018 1463 aa24.14■■□□□ 1.46
TRIM50-201ENST00000333149 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
TRIM50-201ENST00000333149 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
TRIM50-201ENST00000333149 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
TRIM50-201ENST00000333149 WASHC2CQ9Y4E1 1318 aa24.11■■□□□ 1.45
TRIM50-201ENST00000333149 ATP10AO60312 1499 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
TRIM50-201ENST00000333149 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
TRIM50-201ENST00000333149 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
TRIM50-201ENST00000333149 INSRP06213 1382 aa24.09■■□□□ 1.45
TRIM50-201ENST00000333149 A2MP01023 1474 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 ERICH6Q7L0X2 663 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PLEKHH2Q8IVE3 1493 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
TRIM50-201ENST00000333149 PLCH2O75038 1416 aa24.08■■□□□ 1.44
TRIM50-201ENST00000333149 ARHGAP5Q13017 1502 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
TRIM50-201ENST00000333149 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 ZMYM4Q5VZL5 1548 aa24.06■■□□□ 1.44
TRIM50-201ENST00000333149 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
TRIM50-201ENST00000333149 EIF2AK4Q9P2K8 1649 aaKnown RBP24.04■■□□□ 1.44
TRIM50-201ENST00000333149 NBPF1Q3BBV0 1214 aa24.03■■□□□ 1.44
TRIM50-201ENST00000333149 TESK2Q96S53 571 aa24.03■■□□□ 1.44
TRIM50-201ENST00000333149 DUOX2Q9NRD8 1548 aa24.02■■□□□ 1.44
TRIM50-201ENST00000333149 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
TRIM50-201ENST00000333149 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
TRIM50-201ENST00000333149 MYT1LQ9UL68 1186 aa24■■□□□ 1.43
TRIM50-201ENST00000333149 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
TRIM50-201ENST00000333149 ERBINQ96RT1 1412 aa23.99■■□□□ 1.43
TRIM50-201ENST00000333149 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
TRIM50-201ENST00000333149 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
TRIM50-201ENST00000333149 RCAN3Q9UKA8 241 aa23.96■■□□□ 1.43
TRIM50-201ENST00000333149 DISP3Q9P2K9 1392 aa23.95■■□□□ 1.43
TRIM50-201ENST00000333149 BLMP54132 1417 aaPredicted RBP23.94■■□□□ 1.42
TRIM50-201ENST00000333149 RNF17Q9BXT8 1623 aaKnown RBP23.94■■□□□ 1.42
TRIM50-201ENST00000333149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRIM50-201ENST00000333149 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
TRIM50-201ENST00000333149 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
TRIM50-201ENST00000333149 TMF1P82094 1093 aa23.91■■□□□ 1.42
TRIM50-201ENST00000333149 FANCAO15360 1455 aa23.89■■□□□ 1.42
TRIM50-201ENST00000333149 PANK3Q9H999 370 aa23.89■■□□□ 1.41
TRIM50-201ENST00000333149 CD109Q6YHK3 1445 aa23.89■■□□□ 1.41
TRIM50-201ENST00000333149 BCL11AQ9H165 835 aa23.88■■□□□ 1.41
TRIM50-201ENST00000333149 ABCC1P33527 1531 aa23.87■■□□□ 1.41
TRIM50-201ENST00000333149 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
TRIM50-201ENST00000333149 IPO9Q96P70 1041 aaKnown RBP23.85■■□□□ 1.41
TRIM50-201ENST00000333149 STAC3Q96MF2 364 aa23.84■■□□□ 1.41
TRIM50-201ENST00000333149 TCERG1O14776 1098 aaKnown RBP23.84■■□□□ 1.41
TRIM50-201ENST00000333149 ANP32AP39687 249 aaKnown RBP23.84■■□□□ 1.41
TRIM50-201ENST00000333149 CC2D1BQ5T0F9 858 aaKnown RBP23.83■■□□□ 1.4
TRIM50-201ENST00000333149 TRAPPC8Q9Y2L5 1435 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 MADDQ8WXG6 1647 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 IQGAP1P46940 1657 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
TRIM50-201ENST00000333149 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
TRIM50-201ENST00000333149 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
TRIM50-201ENST00000333149 GLI2P10070 1586 aa23.79■■□□□ 1.4
TRIM50-201ENST00000333149 ADGRL1O94910 1474 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 TRPM2O94759 1503 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
TRIM50-201ENST00000333149 PTPRTO14522 1441 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
TRIM50-201ENST00000333149 MS4A1P11836 297 aa23.77■■□□□ 1.4
TRIM50-201ENST00000333149 FAM69CQ0P6D2 419 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms