RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 ROCK1Q13464 1354 aa25.69■■□□□ 1.7
CLDN6-201ENST00000328796 MROH2AA6NES4 1674 aa25.68■■□□□ 1.7
CLDN6-201ENST00000328796 ESF1Q9H501 851 aaKnown RBP25.68■■□□□ 1.7
CLDN6-201ENST00000328796 FAM135AQ9P2D6 1515 aa25.67■■□□□ 1.7
CLDN6-201ENST00000328796 ITGAEP38570 1179 aa25.66■■□□□ 1.7
CLDN6-201ENST00000328796 CLTCQ00610 1675 aaKnown RBP25.66■■□□□ 1.7
CLDN6-201ENST00000328796 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
CLDN6-201ENST00000328796 C3P01024 1663 aa25.64■■□□□ 1.69
CLDN6-201ENST00000328796 KDM5DQ9BY66 1539 aa25.61■■□□□ 1.69
CLDN6-201ENST00000328796 ANKRD50Q9ULJ7 1429 aa25.61■■□□□ 1.69
CLDN6-201ENST00000328796 DEPDC5O75140 1603 aa25.61■■□□□ 1.69
CLDN6-201ENST00000328796 CEBPAP49715 358 aaPredicted RBP25.6■■□□□ 1.69
CLDN6-201ENST00000328796 PRDM15P57071 1507 aaPredicted RBP25.59■■□□□ 1.69
CLDN6-201ENST00000328796 ZMYM3Q14202 1370 aa25.59■■□□□ 1.69
CLDN6-201ENST00000328796 SETD1BQ9UPS6 1966 aaKnown RBP25.57■■□□□ 1.68
CLDN6-201ENST00000328796 ZC3H13Q5T200 1668 aaKnown RBP25.57■■□□□ 1.68
CLDN6-201ENST00000328796 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
CLDN6-201ENST00000328796 WASHC2CQ9Y4E1 1318 aa25.56■■□□□ 1.68
CLDN6-201ENST00000328796 ABCC3O15438 1527 aa25.56■■□□□ 1.68
CLDN6-201ENST00000328796 CEP152O94986 1710 aa25.52■■□□□ 1.68
CLDN6-201ENST00000328796 VWDEQ8N2E2 1590 aa25.51■■□□□ 1.68
CLDN6-201ENST00000328796 NPATQ14207 1427 aa25.5■■□□□ 1.67
CLDN6-201ENST00000328796 GCC2Q8IWJ2 1684 aa25.49■■□□□ 1.67
CLDN6-201ENST00000328796 PZPP20742 1482 aa25.49■■□□□ 1.67
CLDN6-201ENST00000328796 NAIPQ13075 1403 aa25.49■■□□□ 1.67
CLDN6-201ENST00000328796 KANK1Q14678 1352 aa25.49■■□□□ 1.67
CLDN6-201ENST00000328796 PREX1Q8TCU6 1659 aa25.48■■□□□ 1.67
CLDN6-201ENST00000328796 UNC13BO14795 1591 aa25.48■■□□□ 1.67
CLDN6-201ENST00000328796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.67
CLDN6-201ENST00000328796 CAMSAP1Q5T5Y3 1602 aa25.47■■□□□ 1.67
CLDN6-201ENST00000328796 HFM1A2PYH4 1435 aa25.47■■□□□ 1.67
CLDN6-201ENST00000328796 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
CLDN6-201ENST00000328796 LMTK3Q96Q04 1460 aa25.46■■□□□ 1.67
CLDN6-201ENST00000328796 ARHGAP31Q2M1Z3 1444 aa25.42■■□□□ 1.66
CLDN6-201ENST00000328796 UHRF1BP1Q6BDS2 1440 aa25.4■■□□□ 1.66
CLDN6-201ENST00000328796 FBXO31Q5XUX0 539 aaPredicted RBP25.4■■□□□ 1.66
CLDN6-201ENST00000328796 CFAP65Q6ZU64 1925 aaKnown RBP25.38■■□□□ 1.65
CLDN6-201ENST00000328796 IQGAP3Q86VI3 1631 aa25.38■■□□□ 1.65
CLDN6-201ENST00000328796 SPATA31D1Q6ZQQ2 1576 aa25.37■■□□□ 1.65
CLDN6-201ENST00000328796 EFCAB6Q5THR3 1501 aa25.37■■□□□ 1.65
CLDN6-201ENST00000328796 MYO3AQ8NEV4 1616 aa25.36■■□□□ 1.65
CLDN6-201ENST00000328796 TET3O43151 1660 aa25.36■■□□□ 1.65
CLDN6-201ENST00000328796 TNRQ92752 1358 aa25.36■■□□□ 1.65
CLDN6-201ENST00000328796 ERVK-7P63135 1459 aa25.35■■□□□ 1.65
CLDN6-201ENST00000328796 NUP155O75694 1391 aa25.34■■□□□ 1.65
CLDN6-201ENST00000328796 ZNF142P52746 1687 aaPredicted RBP25.33■■□□□ 1.65
CLDN6-201ENST00000328796 CEP170BQ9Y4F5 1589 aaPredicted RBP25.3■■□□□ 1.64
CLDN6-201ENST00000328796 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
CLDN6-201ENST00000328796 HSPA2P54652 639 aa25.3■■□□□ 1.64
CLDN6-201ENST00000328796 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
CLDN6-201ENST00000328796 NLRP1Q9C000 1473 aa25.28■■□□□ 1.64
CLDN6-201ENST00000328796 E9PCH4 1651 aa25.26■■□□□ 1.63
CLDN6-201ENST00000328796 NOS1P29475 1434 aa25.26■■□□□ 1.63
CLDN6-201ENST00000328796 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
CLDN6-201ENST00000328796 SYNMO15061 1565 aa25.22■■□□□ 1.63
CLDN6-201ENST00000328796 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
CLDN6-201ENST00000328796 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
CLDN6-201ENST00000328796 ACIN1Q9UKV3 1341 aaKnown RBP25.17■■□□□ 1.62
CLDN6-201ENST00000328796 STRCQ7RTU9 1775 aa25.17■■□□□ 1.62
CLDN6-201ENST00000328796 PLA2R1Q13018 1463 aa25.16■■□□□ 1.62
CLDN6-201ENST00000328796 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
CLDN6-201ENST00000328796 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
CLDN6-201ENST00000328796 PIK3C2BO00750 1634 aa25.14■■□□□ 1.62
CLDN6-201ENST00000328796 SLC52A1Q9NWF4 448 aa25.13■■□□□ 1.61
CLDN6-201ENST00000328796 KDM5AP29375 1690 aaKnown RBP25.12■■□□□ 1.61
CLDN6-201ENST00000328796 IDI1Q13907 227 aa25.12■■□□□ 1.61
CLDN6-201ENST00000328796 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
CLDN6-201ENST00000328796 PTPRTO14522 1441 aa25.11■■□□□ 1.61
CLDN6-201ENST00000328796 SPHKAPQ2M3C7 1700 aa25.11■■□□□ 1.61
CLDN6-201ENST00000328796 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
CLDN6-201ENST00000328796 PKD2Q13563 968 aa25.09■■□□□ 1.61
CLDN6-201ENST00000328796 HRCP23327 699 aa25.08■■□□□ 1.61
CLDN6-201ENST00000328796 ADGRB3O60242 1522 aa25.06■■□□□ 1.6
CLDN6-201ENST00000328796 MPHOSPH9Q99550 1183 aa25.05■■□□□ 1.6
CLDN6-201ENST00000328796 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
CLDN6-201ENST00000328796 TRPM2O94759 1503 aa25.04■■□□□ 1.6
CLDN6-201ENST00000328796 DMRT2Q9Y5R5 561 aa25.04■■□□□ 1.6
CLDN6-201ENST00000328796 SLIT1O75093 1534 aa25.03■■□□□ 1.6
CLDN6-201ENST00000328796 ARHGAP23Q9P227 1491 aa25.03■■□□□ 1.6
CLDN6-201ENST00000328796 NCKAP5LQ9HCH0 1330 aa25.03■■□□□ 1.6
CLDN6-201ENST00000328796 TRIM26Q12899 539 aaPredicted RBP25.02■■□□□ 1.6
CLDN6-201ENST00000328796 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
CLDN6-201ENST00000328796 TMEM131LA2VDJ0 1609 aa25.01■■□□□ 1.59
CLDN6-201ENST00000328796 MYO5BQ9ULV0 1848 aa25.01■■□□□ 1.59
CLDN6-201ENST00000328796 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
CLDN6-201ENST00000328796 NEURL4Q96JN8 1562 aa25■■□□□ 1.59
CLDN6-201ENST00000328796 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
CLDN6-201ENST00000328796 TMEM2Q9UHN6 1383 aa24.99■■□□□ 1.59
CLDN6-201ENST00000328796 CLTCL1P53675 1640 aa24.98■■□□□ 1.59
CLDN6-201ENST00000328796 FOXD1Q16676 465 aa24.96■■□□□ 1.59
CLDN6-201ENST00000328796 MED14O60244 1454 aa24.96■■□□□ 1.59
CLDN6-201ENST00000328796 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
CLDN6-201ENST00000328796 LTKP29376 864 aa24.93■■□□□ 1.58
CLDN6-201ENST00000328796 KIF1BO60333 1816 aa24.92■■□□□ 1.58
CLDN6-201ENST00000328796 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
CLDN6-201ENST00000328796 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
CLDN6-201ENST00000328796 CHGAP10645 457 aaKnown RBP24.91■■□□□ 1.58
CLDN6-201ENST00000328796 TXNDC2Q86VQ3 553 aa24.91■■□□□ 1.58
CLDN6-201ENST00000328796 EID1Q9Y6B2 187 aa24.91■■□□□ 1.58
CLDN6-201ENST00000328796 IQGAP1P46940 1657 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms