RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 A2MP01023 1474 aa18.68■□□□□ 0.58
DDX39A-202ENST00000324340 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-202ENST00000324340 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
DDX39A-202ENST00000324340 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
DDX39A-202ENST00000324340 IQGAP3Q86VI3 1631 aa18.66■□□□□ 0.58
DDX39A-202ENST00000324340 NUP155O75694 1391 aa18.65■□□□□ 0.58
DDX39A-202ENST00000324340 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
DDX39A-202ENST00000324340 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
DDX39A-202ENST00000324340 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
DDX39A-202ENST00000324340 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
DDX39A-202ENST00000324340 YEATS2Q9ULM3 1422 aa18.62■□□□□ 0.57
DDX39A-202ENST00000324340 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
DDX39A-202ENST00000324340 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-202ENST00000324340 MROH1Q8NDA8 1641 aa18.61■□□□□ 0.57
DDX39A-202ENST00000324340 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
DDX39A-202ENST00000324340 ATP10AO60312 1499 aa18.58■□□□□ 0.56
DDX39A-202ENST00000324340 ARHGEF40Q8TER5 1519 aa18.58■□□□□ 0.56
DDX39A-202ENST00000324340 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
DDX39A-202ENST00000324340 KIF3BO15066 747 aa18.55■□□□□ 0.56
DDX39A-202ENST00000324340 AGLP35573 1532 aa18.54■□□□□ 0.56
DDX39A-202ENST00000324340 PKD2Q13563 968 aa18.54■□□□□ 0.56
DDX39A-202ENST00000324340 TET3O43151 1660 aa18.54■□□□□ 0.56
DDX39A-202ENST00000324340 LMTK2Q8IWU2 1503 aa18.53■□□□□ 0.56
DDX39A-202ENST00000324340 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
DDX39A-202ENST00000324340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.568e-8■■■■□ 19.8
DDX39A-202ENST00000324340 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
DDX39A-202ENST00000324340 KANK1Q14678 1352 aa18.52■□□□□ 0.56
DDX39A-202ENST00000324340 FOXD1Q16676 465 aa18.52■□□□□ 0.55
DDX39A-202ENST00000324340 E9PCH4 1651 aa18.49■□□□□ 0.55
DDX39A-202ENST00000324340 SIGLEC1Q9BZZ2 1709 aa18.48■□□□□ 0.55
DDX39A-202ENST00000324340 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
DDX39A-202ENST00000324340 ZC3H13Q5T200 1668 aaKnown RBP18.48■□□□□ 0.55
DDX39A-202ENST00000324340 CEP152O94986 1710 aa18.47■□□□□ 0.55
DDX39A-202ENST00000324340 EFCAB6Q5THR3 1501 aa18.47■□□□□ 0.55
DDX39A-202ENST00000324340 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
DDX39A-202ENST00000324340 ABCC3O15438 1527 aa18.45■□□□□ 0.54
DDX39A-202ENST00000324340 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
DDX39A-202ENST00000324340 PTPRTO14522 1441 aa18.42■□□□□ 0.54
DDX39A-202ENST00000324340 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
DDX39A-202ENST00000324340 GGT6Q6P531 493 aa18.42■□□□□ 0.54
DDX39A-202ENST00000324340 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
DDX39A-202ENST00000324340 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
DDX39A-202ENST00000324340 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
DDX39A-202ENST00000324340 TRPM2O94759 1503 aa18.4■□□□□ 0.54
DDX39A-202ENST00000324340 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
DDX39A-202ENST00000324340 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
DDX39A-202ENST00000324340 CCDC144AA2RUR9 1427 aa18.37■□□□□ 0.53
DDX39A-202ENST00000324340 NPATQ14207 1427 aa18.36■□□□□ 0.53
DDX39A-202ENST00000324340 PPP1R15AO75807 674 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-202ENST00000324340 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.53
DDX39A-202ENST00000324340 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
DDX39A-202ENST00000324340 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
DDX39A-202ENST00000324340 NOS1P29475 1434 aa18.31■□□□□ 0.52
DDX39A-202ENST00000324340 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
DDX39A-202ENST00000324340 CLTCQ00610 1675 aaKnown RBP18.31■□□□□ 0.52
DDX39A-202ENST00000324340 CENPBP07199 599 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-202ENST00000324340 L3MBTL2Q969R5 705 aa18.3■□□□□ 0.52
DDX39A-202ENST00000324340 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
DDX39A-202ENST00000324340 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.52
DDX39A-202ENST00000324340 PIK3C2BO00750 1634 aa18.27■□□□□ 0.52
DDX39A-202ENST00000324340 SYNMO15061 1565 aa18.26■□□□□ 0.51
DDX39A-202ENST00000324340 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
DDX39A-202ENST00000324340 UGGT1Q9NYU2 1555 aa18.24■□□□□ 0.51
DDX39A-202ENST00000324340 ARID4BQ4LE39 1312 aaPredicted RBP18.24■□□□□ 0.51
DDX39A-202ENST00000324340 KIF1BO60333 1816 aa18.24■□□□□ 0.51
DDX39A-202ENST00000324340 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
DDX39A-202ENST00000324340 MLECQ14165 292 aa18.23■□□□□ 0.51
DDX39A-202ENST00000324340 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
DDX39A-202ENST00000324340 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
DDX39A-202ENST00000324340 CFAP65Q6ZU64 1925 aaKnown RBP18.22■□□□□ 0.51
DDX39A-202ENST00000324340 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
DDX39A-202ENST00000324340 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
DDX39A-202ENST00000324340 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
DDX39A-202ENST00000324340 ESF1Q9H501 851 aaKnown RBP18.18■□□□□ 0.5
DDX39A-202ENST00000324340 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
DDX39A-202ENST00000324340 IFT172Q9UG01 1749 aa18.17■□□□□ 0.5
DDX39A-202ENST00000324340 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
DDX39A-202ENST00000324340 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
DDX39A-202ENST00000324340 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
DDX39A-202ENST00000324340 RGL3Q3MIN7 710 aa18.15■□□□□ 0.5
DDX39A-202ENST00000324340 FBXO31Q5XUX0 539 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-202ENST00000324340 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
DDX39A-202ENST00000324340 PRAG1Q86YV5 1406 aa18.14■□□□□ 0.49
DDX39A-202ENST00000324340 C3P01024 1663 aa18.13■□□□□ 0.49
DDX39A-202ENST00000324340 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
DDX39A-202ENST00000324340 MYOM2P54296 1465 aa18.12■□□□□ 0.49
DDX39A-202ENST00000324340 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
DDX39A-202ENST00000324340 IDI1Q13907 227 aa18.12■□□□□ 0.49
DDX39A-202ENST00000324340 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
DDX39A-202ENST00000324340 PPLO60437 1756 aa18.11■□□□□ 0.49
DDX39A-202ENST00000324340 TRPM1Q7Z4N2 1603 aa18.11■□□□□ 0.49
DDX39A-202ENST00000324340 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
DDX39A-202ENST00000324340 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
DDX39A-202ENST00000324340 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
DDX39A-202ENST00000324340 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
DDX39A-202ENST00000324340 NRXN1Q9ULB1 1477 aa18.08■□□□□ 0.49
DDX39A-202ENST00000324340 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
DDX39A-202ENST00000324340 TNRQ92752 1358 aa18.07■□□□□ 0.48
DDX39A-202ENST00000324340 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
DDX39A-202ENST00000324340 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms