RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 HMMRO75330 724 aa13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
SNRNP200-201ENST00000323853 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
SNRNP200-201ENST00000323853 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
SNRNP200-201ENST00000323853 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
SNRNP200-201ENST00000323853 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.23
SNRNP200-201ENST00000323853 TRAK1Q9UPV9 953 aa13.65□□□□□ -0.23
SNRNP200-201ENST00000323853 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
SNRNP200-201ENST00000323853 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 E9PSI1 815 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 KIAA2012Q0VF49 1180 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 CRBNQ96SW2 442 aa13.63□□□□□ -0.23
SNRNP200-201ENST00000323853 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 PLIN1O60240 522 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 IGF1RP08069 1367 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 PDE4AP27815 886 aa13.62□□□□□ -0.23
SNRNP200-201ENST00000323853 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
SNRNP200-201ENST00000323853 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
SNRNP200-201ENST00000323853 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
SNRNP200-201ENST00000323853 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
SNRNP200-201ENST00000323853 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
SNRNP200-201ENST00000323853 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
SNRNP200-201ENST00000323853 EID1Q9Y6B2 187 aa13.6□□□□□ -0.23
SNRNP200-201ENST00000323853 PTPRGP23470 1445 aa13.59□□□□□ -0.23
SNRNP200-201ENST00000323853 EVC2Q86UK5 1308 aa13.59□□□□□ -0.23
SNRNP200-201ENST00000323853 ST18O60284 1047 aa13.59□□□□□ -0.23
SNRNP200-201ENST00000323853 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.23
SNRNP200-201ENST00000323853 FYCO1Q9BQS8 1478 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 AMPHP49418 695 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 TPM4P67936 248 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 NGDNQ8NEJ9 315 aaKnown RBP13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
SNRNP200-201ENST00000323853 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
SNRNP200-201ENST00000323853 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
SNRNP200-201ENST00000323853 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
SNRNP200-201ENST00000323853 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
SNRNP200-201ENST00000323853 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
SNRNP200-201ENST00000323853 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
SNRNP200-201ENST00000323853 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
SNRNP200-201ENST00000323853 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
SNRNP200-201ENST00000323853 PHF14O94880 888 aa13.54□□□□□ -0.24
SNRNP200-201ENST00000323853 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-201ENST00000323853 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
SNRNP200-201ENST00000323853 COG3Q96JB2 828 aa13.54□□□□□ -0.24
SNRNP200-201ENST00000323853 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
SNRNP200-201ENST00000323853 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
SNRNP200-201ENST00000323853 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
SNRNP200-201ENST00000323853 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
SNRNP200-201ENST00000323853 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
SNRNP200-201ENST00000323853 COG6Q9Y2V7 657 aa13.52□□□□□ -0.24
SNRNP200-201ENST00000323853 KIF16BQ96L93 1317 aa13.52□□□□□ -0.24
SNRNP200-201ENST00000323853 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
SNRNP200-201ENST00000323853 SLC4A3P48751 1232 aa13.52□□□□□ -0.24
SNRNP200-201ENST00000323853 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.24
SNRNP200-201ENST00000323853 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
SNRNP200-201ENST00000323853 APAF1O14727 1248 aa13.51□□□□□ -0.25
SNRNP200-201ENST00000323853 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-201ENST00000323853 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-201ENST00000323853 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-201ENST00000323853 CLSTN1O94985 981 aa13.5□□□□□ -0.25
SNRNP200-201ENST00000323853 RILPL2Q969X0 211 aa13.5□□□□□ -0.25
SNRNP200-201ENST00000323853 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 DDX19BQ9UMR2 479 aa13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 GSE1Q14687 1217 aa13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
SNRNP200-201ENST00000323853 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
SNRNP200-201ENST00000323853 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
SNRNP200-201ENST00000323853 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
SNRNP200-201ENST00000323853 RUNDC1Q96C34 613 aa13.48□□□□□ -0.25
SNRNP200-201ENST00000323853 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
SNRNP200-201ENST00000323853 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
SNRNP200-201ENST00000323853 ARID3AQ99856 593 aa13.47□□□□□ -0.25
SNRNP200-201ENST00000323853 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
SNRNP200-201ENST00000323853 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-201ENST00000323853 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.25
SNRNP200-201ENST00000323853 BRD4O60885 1362 aaPredicted RBP13.46□□□□□ -0.26
SNRNP200-201ENST00000323853 ROCK1Q13464 1354 aa13.46□□□□□ -0.26
SNRNP200-201ENST00000323853 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.26
SNRNP200-201ENST00000323853 NCAPD3P42695 1498 aa13.46□□□□□ -0.26
SNRNP200-201ENST00000323853 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
SNRNP200-201ENST00000323853 RIPK4P57078 832 aa13.45□□□□□ -0.26
SNRNP200-201ENST00000323853 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
SNRNP200-201ENST00000323853 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms