RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 TET3O43151 1660 aa16.92■□□□□ 0.3
NCL-201ENST00000322723 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.38e-30■□□□□ 8.2
NCL-201ENST00000322723 NUP155O75694 1391 aa16.9■□□□□ 0.3
NCL-201ENST00000322723 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
NCL-201ENST00000322723 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
NCL-201ENST00000322723 PKD2Q13563 968 aa16.88■□□□□ 0.29
NCL-201ENST00000322723 TRPM2O94759 1503 aa16.88■□□□□ 0.29
NCL-201ENST00000322723 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
NCL-201ENST00000322723 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
NCL-201ENST00000322723 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
NCL-201ENST00000322723 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
NCL-201ENST00000322723 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
NCL-201ENST00000322723 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
NCL-201ENST00000322723 HIRIP3Q9BW71 556 aaPredicted RBP16.87■□□□□ 0.29
NCL-201ENST00000322723 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 KIAA1210Q9ULL0 1709 aa16.86■□□□□ 0.29
NCL-201ENST00000322723 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
NCL-201ENST00000322723 ATP7AQ04656 1500 aa16.85■□□□□ 0.29
NCL-201ENST00000322723 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
NCL-201ENST00000322723 A2MP01023 1474 aa16.85■□□□□ 0.29
NCL-201ENST00000322723 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
NCL-201ENST00000322723 BCANQ96GW7 911 aa16.84■□□□□ 0.29
NCL-201ENST00000322723 PTPRTO14522 1441 aa16.83■□□□□ 0.28
NCL-201ENST00000322723 ANP32CO43423 234 aa16.82■□□□□ 0.28
NCL-201ENST00000322723 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
NCL-201ENST00000322723 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
NCL-201ENST00000322723 USP47Q96K76 1375 aa16.8■□□□□ 0.28
NCL-201ENST00000322723 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
NCL-201ENST00000322723 FANCAO15360 1455 aa16.77■□□□□ 0.28
NCL-201ENST00000322723 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
NCL-201ENST00000322723 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
NCL-201ENST00000322723 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
NCL-201ENST00000322723 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
NCL-201ENST00000322723 EFCAB6Q5THR3 1501 aa16.74■□□□□ 0.27
NCL-201ENST00000322723 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
NCL-201ENST00000322723 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
NCL-201ENST00000322723 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
NCL-201ENST00000322723 MAP3K4Q9Y6R4 1608 aa16.72■□□□□ 0.27
NCL-201ENST00000322723 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
NCL-201ENST00000322723 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
NCL-201ENST00000322723 MROH2AA6NES4 1674 aa16.71■□□□□ 0.26
NCL-201ENST00000322723 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
NCL-201ENST00000322723 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
NCL-201ENST00000322723 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
NCL-201ENST00000322723 KIF1BO60333 1816 aa16.69■□□□□ 0.26
NCL-201ENST00000322723 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
NCL-201ENST00000322723 MYOM1P52179 1685 aa16.68■□□□□ 0.26
NCL-201ENST00000322723 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
NCL-201ENST00000322723 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
NCL-201ENST00000322723 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
NCL-201ENST00000322723 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
NCL-201ENST00000322723 MYOM2P54296 1465 aa16.67■□□□□ 0.26
NCL-201ENST00000322723 GLI2P10070 1586 aa16.67■□□□□ 0.26
NCL-201ENST00000322723 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
NCL-201ENST00000322723 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
NCL-201ENST00000322723 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
NCL-201ENST00000322723 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
NCL-201ENST00000322723 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
NCL-201ENST00000322723 ZMYM4Q5VZL5 1548 aa16.65■□□□□ 0.26
NCL-201ENST00000322723 PPLO60437 1756 aa16.64■□□□□ 0.26
NCL-201ENST00000322723 NEFLP07196 543 aa16.64■□□□□ 0.25
NCL-201ENST00000322723 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
NCL-201ENST00000322723 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
NCL-201ENST00000322723 NEO1Q92859 1461 aa16.62■□□□□ 0.25
NCL-201ENST00000322723 SPAG9O60271 1321 aaKnown RBP16.61■□□□□ 0.25
NCL-201ENST00000322723 CCDC184Q52MB2 194 aa16.61■□□□□ 0.25
NCL-201ENST00000322723 SIGLEC1Q9BZZ2 1709 aa16.6■□□□□ 0.25
NCL-201ENST00000322723 SYNMO15061 1565 aa16.6■□□□□ 0.25
NCL-201ENST00000322723 CAMSAP1Q5T5Y3 1602 aa16.6■□□□□ 0.25
NCL-201ENST00000322723 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
NCL-201ENST00000322723 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
NCL-201ENST00000322723 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
NCL-201ENST00000322723 LRPPRCP42704 1394 aaKnown RBP16.58■□□□□ 0.24
NCL-201ENST00000322723 INSRP06213 1382 aa16.57■□□□□ 0.24
NCL-201ENST00000322723 TESK2Q96S53 571 aa16.56■□□□□ 0.24
NCL-201ENST00000322723 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
NCL-201ENST00000322723 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
NCL-201ENST00000322723 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
NCL-201ENST00000322723 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
NCL-201ENST00000322723 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
NCL-201ENST00000322723 ABCC3O15438 1527 aa16.54■□□□□ 0.24
NCL-201ENST00000322723 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
NCL-201ENST00000322723 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.24
NCL-201ENST00000322723 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
NCL-201ENST00000322723 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.23
NCL-201ENST00000322723 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
NCL-201ENST00000322723 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
NCL-201ENST00000322723 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
NCL-201ENST00000322723 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
NCL-201ENST00000322723 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
NCL-201ENST00000322723 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
NCL-201ENST00000322723 WASHC2CQ9Y4E1 1318 aa16.49■□□□□ 0.23
NCL-201ENST00000322723 NBPF1Q3BBV0 1214 aa16.48■□□□□ 0.23
NCL-201ENST00000322723 KANK1Q14678 1352 aa16.48■□□□□ 0.23
NCL-201ENST00000322723 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms