RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 RRP7BPQ9NSQ0 103 aa44.83■■■■■ 4.77
SYNGR1-202ENST00000318801 DUOX2Q9NRD8 1548 aa44.83■■■■■ 4.77
SYNGR1-202ENST00000318801 KIF15Q9NS87 1388 aa44.82■■■■■ 4.77
SYNGR1-202ENST00000318801 ANKRD30AQ9BXX3 1397 aa44.81■■■■■ 4.76
SYNGR1-202ENST00000318801 PPARGC1BQ86YN6 1023 aaKnown RBP44.81■■■■■ 4.76
SYNGR1-202ENST00000318801 FAM135AQ9P2D6 1515 aa44.8■■■■■ 4.76
SYNGR1-202ENST00000318801 CHIC2Q9UKJ5 165 aa44.8■■■■■ 4.76
SYNGR1-202ENST00000318801 EIF2AK4Q9P2K8 1649 aaKnown RBP44.77■■■■■ 4.76
SYNGR1-202ENST00000318801 KDM5DQ9BY66 1539 aa44.75■■■■■ 4.75
SYNGR1-202ENST00000318801 ERBINQ96RT1 1412 aa44.69■■■■■ 4.75
SYNGR1-202ENST00000318801 RNF17Q9BXT8 1623 aaKnown RBP44.68■■■■■ 4.74
SYNGR1-202ENST00000318801 PTPRKQ15262 1439 aa44.68■■■■■ 4.74
SYNGR1-202ENST00000318801 NCOA1Q15788 1441 aa44.65■■■■■ 4.74
SYNGR1-202ENST00000318801 DMRT2Q9Y5R5 561 aa44.59■■■■■ 4.73
SYNGR1-202ENST00000318801 ADGRL2O95490 1459 aa44.57■■■■■ 4.73
SYNGR1-202ENST00000318801 ZC3H13Q5T200 1668 aaKnown RBP44.57■■■■■ 4.72
SYNGR1-202ENST00000318801 PZPP20742 1482 aa44.57■■■■■ 4.72
SYNGR1-202ENST00000318801 KANK1Q14678 1352 aa44.55■■■■■ 4.72
SYNGR1-202ENST00000318801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP44.55■■■■■ 4.72
SYNGR1-202ENST00000318801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.53■■■■■ 4.72
SYNGR1-202ENST00000318801 FBXO31Q5XUX0 539 aaPredicted RBP44.53■■■■■ 4.72
SYNGR1-202ENST00000318801 ABCC3O15438 1527 aa44.52■■■■■ 4.72
SYNGR1-202ENST00000318801 TNRQ92752 1358 aa44.5■■■■■ 4.71
SYNGR1-202ENST00000318801 ITGAEP38570 1179 aa44.47■■■■■ 4.71
SYNGR1-202ENST00000318801 MYO3AQ8NEV4 1616 aa44.47■■■■■ 4.71
SYNGR1-202ENST00000318801 MROH1Q8NDA8 1641 aa44.46■■■■■ 4.71
SYNGR1-202ENST00000318801 PRDM15P57071 1507 aaPredicted RBP44.44■■■■■ 4.7
SYNGR1-202ENST00000318801 ANKRD50Q9ULJ7 1429 aa44.42■■■■■ 4.7
SYNGR1-202ENST00000318801 CEP170BQ9Y4F5 1589 aaPredicted RBP44.42■■■■■ 4.7
SYNGR1-202ENST00000318801 ROCK1Q13464 1354 aa44.41■■■■■ 4.7
SYNGR1-202ENST00000318801 ZNF142P52746 1687 aaPredicted RBP44.4■■■■■ 4.7
SYNGR1-202ENST00000318801 CEP152O94986 1710 aa44.39■■■■■ 4.7
SYNGR1-202ENST00000318801 DEPDC5O75140 1603 aa44.39■■■■■ 4.7
SYNGR1-202ENST00000318801 STRCQ7RTU9 1775 aa44.37■■■■■ 4.69
SYNGR1-202ENST00000318801 A2ML1A8K2U0 1454 aa44.37■■■■■ 4.69
SYNGR1-202ENST00000318801 CAMSAP1Q5T5Y3 1602 aa44.36■■■■■ 4.69
SYNGR1-202ENST00000318801 NLRP1Q9C000 1473 aa44.33■■■■■ 4.69
SYNGR1-202ENST00000318801 RRBP1Q9P2E9 1410 aaKnown RBP44.31■■■■■ 4.68
SYNGR1-202ENST00000318801 CFAP65Q6ZU64 1925 aaKnown RBP44.31■■■■■ 4.68
SYNGR1-202ENST00000318801 ARHGAP31Q2M1Z3 1444 aa44.3■■■■■ 4.68
SYNGR1-202ENST00000318801 PKD2Q13563 968 aa44.3■■■■■ 4.68
SYNGR1-202ENST00000318801 THEMISQ8N1K5 641 aaPredicted RBP44.29■■■■■ 4.68
SYNGR1-202ENST00000318801 PTPRTO14522 1441 aa44.27■■■■■ 4.68
SYNGR1-202ENST00000318801 PLA2R1Q13018 1463 aa44.26■■■■■ 4.68
SYNGR1-202ENST00000318801 ERVK-7P63135 1459 aa44.25■■■■■ 4.67
SYNGR1-202ENST00000318801 SPATA31D1Q6ZQQ2 1576 aa44.25■■■■■ 4.67
SYNGR1-202ENST00000318801 LMTK2Q8IWU2 1503 aa44.21■■■■■ 4.67
SYNGR1-202ENST00000318801 NCKAP5LQ9HCH0 1330 aa44.21■■■■■ 4.67
SYNGR1-202ENST00000318801 VWDEQ8N2E2 1590 aa44.19■■■■■ 4.66
SYNGR1-202ENST00000318801 UGGT1Q9NYU2 1555 aa44.17■■■■■ 4.66
SYNGR1-202ENST00000318801 ANKLE2Q86XL3 938 aa44.13■■■■■ 4.65
SYNGR1-202ENST00000318801 EFCAB6Q5THR3 1501 aa44.07■■■■■ 4.64
SYNGR1-202ENST00000318801 UNC13BO14795 1591 aa44.05■■■■■ 4.64
SYNGR1-202ENST00000318801 ILDR1Q86SU0 546 aaPredicted RBP44.05■■■■■ 4.64
SYNGR1-202ENST00000318801 STAG3Q9UJ98 1225 aa44.05■■■■■ 4.64
SYNGR1-202ENST00000318801 CERKQ8TCT0 537 aa44.04■■■■■ 4.64
SYNGR1-202ENST00000318801 RPRD2Q5VT52 1461 aaKnown RBP44.02■■■■■ 4.64
SYNGR1-202ENST00000318801 NUP155O75694 1391 aa44.01■■■■■ 4.64
SYNGR1-202ENST00000318801 TET3O43151 1660 aa43.99■■■■■ 4.63
SYNGR1-202ENST00000318801 FBXO41Q8TF61 875 aa43.98■■■■■ 4.63
SYNGR1-202ENST00000318801 SLC52A1Q9NWF4 448 aa43.97■■■■■ 4.63
SYNGR1-202ENST00000318801 POLR1AO95602 1720 aaPredicted RBP43.97■■■■■ 4.63
SYNGR1-202ENST00000318801 GCC2Q8IWJ2 1684 aa43.93■■■■■ 4.62
SYNGR1-202ENST00000318801 IDI1Q13907 227 aa43.92■■■■■ 4.62
SYNGR1-202ENST00000318801 NOS1P29475 1434 aa43.92■■■■■ 4.62
SYNGR1-202ENST00000318801 UBR1Q8IWV7 1749 aa43.91■■■■■ 4.62
SYNGR1-202ENST00000318801 IQGAP3Q86VI3 1631 aa43.9■■■■■ 4.62
SYNGR1-202ENST00000318801 EID1Q9Y6B2 187 aa43.89■■■■■ 4.62
SYNGR1-202ENST00000318801 NAIPQ13075 1403 aa43.88■■■■■ 4.62
SYNGR1-202ENST00000318801 PIK3C2BO00750 1634 aa43.84■■■■■ 4.61
SYNGR1-202ENST00000318801 SYNMO15061 1565 aa43.83■■■■■ 4.61
SYNGR1-202ENST00000318801 HFM1A2PYH4 1435 aa43.82■■■■■ 4.61
SYNGR1-202ENST00000318801 NPHP4O75161 1426 aaPredicted RBP43.82■■■■■ 4.61
SYNGR1-202ENST00000318801 TXNDC2Q86VQ3 553 aa43.82■■■■■ 4.61
SYNGR1-202ENST00000318801 MED14O60244 1454 aa43.81■■■■■ 4.6
SYNGR1-202ENST00000318801 NEURL4Q96JN8 1562 aa43.81■■■■■ 4.6
SYNGR1-202ENST00000318801 KDM5AP29375 1690 aaKnown RBP43.8■■■■■ 4.6
SYNGR1-202ENST00000318801 ZNF335Q9H4Z2 1342 aaPredicted RBP43.79■■■■■ 4.6
SYNGR1-202ENST00000318801 E9PCH4 1651 aa43.77■■■■■ 4.6
SYNGR1-202ENST00000318801 SLIT1O75093 1534 aa43.76■■■■■ 4.6
SYNGR1-202ENST00000318801 SCAF11Q99590 1463 aaKnown RBP43.76■■■■■ 4.6
SYNGR1-202ENST00000318801 LTBP4Q8N2S1 1624 aa43.76■■■■■ 4.59
SYNGR1-202ENST00000318801 TRIM52Q96A61 297 aa43.75■■■■■ 4.59
SYNGR1-202ENST00000318801 TMEM2Q9UHN6 1383 aa43.75■■■■■ 4.59
SYNGR1-202ENST00000318801 ARHGAP23Q9P227 1491 aa43.73■■■■■ 4.59
SYNGR1-202ENST00000318801 IQGAP1P46940 1657 aa43.71■■■■■ 4.59
SYNGR1-202ENST00000318801 LTKP29376 864 aa43.7■■■■■ 4.59
SYNGR1-202ENST00000318801 HDGFP51858 240 aaKnown RBP43.7■■■■■ 4.59
SYNGR1-202ENST00000318801 ADGRB3O60242 1522 aa43.68■■■■■ 4.58
SYNGR1-202ENST00000318801 CHGAP10645 457 aaKnown RBP43.66■■■■■ 4.58
SYNGR1-202ENST00000318801 IQSEC2Q5JU85 1478 aa43.64■■■■■ 4.58
SYNGR1-202ENST00000318801 ACIN1Q9UKV3 1341 aaKnown RBP43.59■■■■■ 4.57
SYNGR1-202ENST00000318801 SLC4A1APQ9BWU0 796 aaKnown RBP43.56■■■■■ 4.56
SYNGR1-202ENST00000318801 CPS1P31327 1500 aa43.55■■■■■ 4.56
SYNGR1-202ENST00000318801 BCANQ96GW7 911 aa43.54■■■■■ 4.56
SYNGR1-202ENST00000318801 PPP1R15AO75807 674 aaPredicted RBP43.54■■■■■ 4.56
SYNGR1-202ENST00000318801 ABCF1Q8NE71 845 aaKnown RBP eCLIP43.53■■■■■ 4.56
SYNGR1-202ENST00000318801 TMEM131LA2VDJ0 1609 aa43.52■■■■■ 4.56
SYNGR1-202ENST00000318801 SPHKAPQ2M3C7 1700 aa43.51■■■■■ 4.56
SYNGR1-202ENST00000318801 MYO5BQ9ULV0 1848 aa43.49■■■■■ 4.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms