RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 FANCIQ9NVI1 1328 aa23.55■■□□□ 1.36
UBE2N-201ENST00000318066 E9PSI1 815 aa23.54■■□□□ 1.36
UBE2N-201ENST00000318066 TPM3P06753 285 aa23.54■■□□□ 1.36
UBE2N-201ENST00000318066 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
UBE2N-201ENST00000318066 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
UBE2N-201ENST00000318066 CLSTN1O94985 981 aa23.52■■□□□ 1.36
UBE2N-201ENST00000318066 PDE4AP27815 886 aa23.52■■□□□ 1.36
UBE2N-201ENST00000318066 UACAQ9BZF9 1416 aa23.52■■□□□ 1.36
UBE2N-201ENST00000318066 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
UBE2N-201ENST00000318066 GSE1Q14687 1217 aa23.51■■□□□ 1.35
UBE2N-201ENST00000318066 ISY1Q9ULR0 285 aaKnown RBP23.51■■□□□ 1.35
UBE2N-201ENST00000318066 HSP90AA2PQ14568 343 aaPredicted RBP23.49■■□□□ 1.35
UBE2N-201ENST00000318066 AAMPQ13685 434 aa23.49■■□□□ 1.35
UBE2N-201ENST00000318066 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
UBE2N-201ENST00000318066 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
UBE2N-201ENST00000318066 CLUAP1Q96AJ1 413 aa23.47■■□□□ 1.35
UBE2N-201ENST00000318066 TAF7LQ5H9L4 462 aa23.47■■□□□ 1.35
UBE2N-201ENST00000318066 RRP1P56182 461 aaKnown RBP23.46■■□□□ 1.35
UBE2N-201ENST00000318066 SF3A1Q15459 793 aaKnown RBP23.46■■□□□ 1.35
UBE2N-201ENST00000318066 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
UBE2N-201ENST00000318066 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
UBE2N-201ENST00000318066 DDX49Q9Y6V7 483 aaKnown RBP23.46■■□□□ 1.35
UBE2N-201ENST00000318066 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
UBE2N-201ENST00000318066 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
UBE2N-201ENST00000318066 PRKCSHP14314 528 aaPredicted RBP23.44■■□□□ 1.34
UBE2N-201ENST00000318066 LRRFIP1Q32MZ4 808 aaKnown RBP23.44■■□□□ 1.34
UBE2N-201ENST00000318066 TMX4Q9H1E5 349 aaPredicted RBP23.43■■□□□ 1.34
UBE2N-201ENST00000318066 GPS2Q13227 327 aa23.43■■□□□ 1.34
UBE2N-201ENST00000318066 MLECQ14165 292 aa23.43■■□□□ 1.34
UBE2N-201ENST00000318066 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
UBE2N-201ENST00000318066 REC8O95072 547 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 SLC4A10Q6U841 1118 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 GOLGA6L19H0YKK7 550 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 KIF3BO15066 747 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 RASSF8Q8NHQ8 419 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
UBE2N-201ENST00000318066 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
UBE2N-201ENST00000318066 RUFY2Q8WXA3 655 aa23.4■■□□□ 1.34
UBE2N-201ENST00000318066 TSR1Q2NL82 804 aaKnown RBP23.39■■□□□ 1.34
UBE2N-201ENST00000318066 A0A0U1RQG5 324 aaPredicted RBP23.39■■□□□ 1.34
UBE2N-201ENST00000318066 TPM1P09493 284 aa23.39■■□□□ 1.33
UBE2N-201ENST00000318066 DDX19BQ9UMR2 479 aa23.39■■□□□ 1.33
UBE2N-201ENST00000318066 CEP89Q96ST8 783 aa23.39■■□□□ 1.33
UBE2N-201ENST00000318066 STAC3Q96MF2 364 aa23.38■■□□□ 1.33
UBE2N-201ENST00000318066 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 BECN2A8MW95 431 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 H3BQV1 296 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 IFFO2Q5TF58 517 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 CHMP5Q9NZZ3 219 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 CPLX2Q6PUV4 134 aaKnown RBP23.37■■□□□ 1.33
UBE2N-201ENST00000318066 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
UBE2N-201ENST00000318066 AMPHP49418 695 aa23.36■■□□□ 1.33
UBE2N-201ENST00000318066 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
UBE2N-201ENST00000318066 FAM184AQ8NB25 1140 aa23.36■■□□□ 1.33
UBE2N-201ENST00000318066 ST20-MTHFSA0A0A6YYL1 179 aa23.35■■□□□ 1.33
UBE2N-201ENST00000318066 CCDC70Q6NSX1 233 aa23.35■■□□□ 1.33
UBE2N-201ENST00000318066 PANK3Q9H999 370 aa23.35■■□□□ 1.33
UBE2N-201ENST00000318066 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
UBE2N-201ENST00000318066 WIZO95785 1651 aa23.35■■□□□ 1.33
UBE2N-201ENST00000318066 SETQ01105 290 aaPredicted RBP23.34■■□□□ 1.33
UBE2N-201ENST00000318066 API5Q9BZZ5 524 aaKnown RBP23.33■■□□□ 1.33
UBE2N-201ENST00000318066 ANKRD45Q5TZF3 282 aa23.33■■□□□ 1.33
UBE2N-201ENST00000318066 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
UBE2N-201ENST00000318066 TPM2P07951 284 aa23.32■■□□□ 1.32
UBE2N-201ENST00000318066 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
UBE2N-201ENST00000318066 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
UBE2N-201ENST00000318066 FOXD4L1Q9NU39 408 aa23.31■■□□□ 1.32
UBE2N-201ENST00000318066 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
UBE2N-201ENST00000318066 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
UBE2N-201ENST00000318066 NUCB2P80303 420 aa23.3■■□□□ 1.32
UBE2N-201ENST00000318066 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
UBE2N-201ENST00000318066 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
UBE2N-201ENST00000318066 USP47Q96K76 1375 aa23.3■■□□□ 1.32
UBE2N-201ENST00000318066 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
UBE2N-201ENST00000318066 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
UBE2N-201ENST00000318066 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
UBE2N-201ENST00000318066 TPD52L1Q16890 204 aaPredicted RBP23.29■■□□□ 1.32
UBE2N-201ENST00000318066 NOL8Q76FK4 1167 aaKnown RBP23.29■■□□□ 1.32
UBE2N-201ENST00000318066 ARID3AQ99856 593 aa23.29■■□□□ 1.32
UBE2N-201ENST00000318066 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.326e-8■■□□□ 14
UBE2N-201ENST00000318066 CRBNQ96SW2 442 aa23.28■■□□□ 1.32
UBE2N-201ENST00000318066 DIAPH3Q9NSV4 1193 aa23.28■■□□□ 1.32
UBE2N-201ENST00000318066 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.27■■□□□ 1.32
UBE2N-201ENST00000318066 AKAP17AQ02040 695 aaKnown RBP23.27■■□□□ 1.32
UBE2N-201ENST00000318066 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
UBE2N-201ENST00000318066 RILPL2Q969X0 211 aa23.26■■□□□ 1.31
UBE2N-201ENST00000318066 COG3Q96JB2 828 aa23.25■■□□□ 1.31
UBE2N-201ENST00000318066 HOOK1Q9UJC3 728 aaKnown RBP23.25■■□□□ 1.31
UBE2N-201ENST00000318066 IPO7O95373 1038 aaKnown RBP23.24■■□□□ 1.31
UBE2N-201ENST00000318066 RNF20Q5VTR2 975 aa23.24■■□□□ 1.31
UBE2N-201ENST00000318066 ANKRD20A12PQ8NF67 263 aa23.24■■□□□ 1.31
UBE2N-201ENST00000318066 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
UBE2N-201ENST00000318066 MARCH6O60337 910 aa23.23■■□□□ 1.31
UBE2N-201ENST00000318066 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
UBE2N-201ENST00000318066 CCDC47Q96A33 483 aaKnown RBP23.23■■□□□ 1.31
UBE2N-201ENST00000318066 NEXNQ0ZGT2 675 aa23.22■■□□□ 1.31
UBE2N-201ENST00000318066 COG6Q9Y2V7 657 aa23.22■■□□□ 1.31
UBE2N-201ENST00000318066 TEX35Q5T0J7 233 aa23.21■■□□□ 1.31
UBE2N-201ENST00000318066 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
UBE2N-201ENST00000318066 TRAK1Q9UPV9 953 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms