RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 REREQ9P2R6 1566 aa23.77■■□□□ 1.4
TUBB3-201ENST00000315491 KDM5DQ9BY66 1539 aa23.76■■□□□ 1.39
TUBB3-201ENST00000315491 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
TUBB3-201ENST00000315491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.39
TUBB3-201ENST00000315491 PZPP20742 1482 aa23.74■■□□□ 1.39
TUBB3-201ENST00000315491 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
TUBB3-201ENST00000315491 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
TUBB3-201ENST00000315491 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
TUBB3-201ENST00000315491 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.39
TUBB3-201ENST00000315491 AGLP35573 1532 aa23.7■■□□□ 1.38
TUBB3-201ENST00000315491 MROH1Q8NDA8 1641 aa23.69■■□□□ 1.38
TUBB3-201ENST00000315491 PRDM15P57071 1507 aaPredicted RBP23.69■■□□□ 1.38
TUBB3-201ENST00000315491 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
TUBB3-201ENST00000315491 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
TUBB3-201ENST00000315491 KANK1Q14678 1352 aa23.68■■□□□ 1.38
TUBB3-201ENST00000315491 CLSPNQ9HAW4 1339 aa23.67■■□□□ 1.38
TUBB3-201ENST00000315491 GGT6Q6P531 493 aa23.66■■□□□ 1.38
TUBB3-201ENST00000315491 VWDEQ8N2E2 1590 aa23.66■■□□□ 1.38
TUBB3-201ENST00000315491 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.37
TUBB3-201ENST00000315491 PKD2Q13563 968 aa23.63■■□□□ 1.37
TUBB3-201ENST00000315491 FOXD1Q16676 465 aa23.6■■□□□ 1.37
TUBB3-201ENST00000315491 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.37
TUBB3-201ENST00000315491 ARID4BQ4LE39 1312 aaPredicted RBP23.58■■□□□ 1.36
TUBB3-201ENST00000315491 TET3O43151 1660 aa23.56■■□□□ 1.36
TUBB3-201ENST00000315491 ABCC3O15438 1527 aa23.56■■□□□ 1.36
TUBB3-201ENST00000315491 WASHC2CQ9Y4E1 1318 aa23.56■■□□□ 1.36
TUBB3-201ENST00000315491 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
TUBB3-201ENST00000315491 MLECQ14165 292 aa23.55■■□□□ 1.36
TUBB3-201ENST00000315491 PPP6R1Q9UPN7 881 aa23.55■■□□□ 1.36
TUBB3-201ENST00000315491 CEP152O94986 1710 aa23.54■■□□□ 1.36
TUBB3-201ENST00000315491 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
TUBB3-201ENST00000315491 ZC3H13Q5T200 1668 aaKnown RBP23.52■■□□□ 1.36
TUBB3-201ENST00000315491 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
TUBB3-201ENST00000315491 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
TUBB3-201ENST00000315491 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
TUBB3-201ENST00000315491 E9PCH4 1651 aa23.49■■□□□ 1.35
TUBB3-201ENST00000315491 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
TUBB3-201ENST00000315491 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
TUBB3-201ENST00000315491 NPATQ14207 1427 aa23.45■■□□□ 1.34
TUBB3-201ENST00000315491 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
TUBB3-201ENST00000315491 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
TUBB3-201ENST00000315491 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
TUBB3-201ENST00000315491 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
TUBB3-201ENST00000315491 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
TUBB3-201ENST00000315491 PTPRTO14522 1441 aa23.42■■□□□ 1.34
TUBB3-201ENST00000315491 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.34
TUBB3-201ENST00000315491 TRPM2O94759 1503 aa23.39■■□□□ 1.33
TUBB3-201ENST00000315491 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
TUBB3-201ENST00000315491 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
TUBB3-201ENST00000315491 ZMYM3Q14202 1370 aa23.35■■□□□ 1.33
TUBB3-201ENST00000315491 NOS1P29475 1434 aa23.34■■□□□ 1.33
TUBB3-201ENST00000315491 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
TUBB3-201ENST00000315491 TONSLQ96HA7 1378 aa23.33■■□□□ 1.33
TUBB3-201ENST00000315491 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
TUBB3-201ENST00000315491 MROH2AA6NES4 1674 aa23.32■■□□□ 1.32
TUBB3-201ENST00000315491 ERVK-7P63135 1459 aa23.3■■□□□ 1.32
TUBB3-201ENST00000315491 PREX1Q8TCU6 1659 aa23.3■■□□□ 1.32
TUBB3-201ENST00000315491 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
TUBB3-201ENST00000315491 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
TUBB3-201ENST00000315491 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
TUBB3-201ENST00000315491 CFAP65Q6ZU64 1925 aaKnown RBP23.28■■□□□ 1.32
TUBB3-201ENST00000315491 SYNMO15061 1565 aa23.28■■□□□ 1.32
TUBB3-201ENST00000315491 MADDQ8WXG6 1647 aa23.28■■□□□ 1.32
TUBB3-201ENST00000315491 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
TUBB3-201ENST00000315491 SPATA31D1Q6ZQQ2 1576 aa23.27■■□□□ 1.31
TUBB3-201ENST00000315491 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
TUBB3-201ENST00000315491 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
TUBB3-201ENST00000315491 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
TUBB3-201ENST00000315491 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
TUBB3-201ENST00000315491 C3P01024 1663 aa23.22■■□□□ 1.31
TUBB3-201ENST00000315491 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
TUBB3-201ENST00000315491 CEBPAP49715 358 aaPredicted RBP23.21■■□□□ 1.31
TUBB3-201ENST00000315491 IDI1Q13907 227 aa23.19■■□□□ 1.3
TUBB3-201ENST00000315491 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
TUBB3-201ENST00000315491 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
TUBB3-201ENST00000315491 TNRQ92752 1358 aa23.19■■□□□ 1.3
TUBB3-201ENST00000315491 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
TUBB3-201ENST00000315491 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
TUBB3-201ENST00000315491 KIF1BO60333 1816 aa23.16■■□□□ 1.3
TUBB3-201ENST00000315491 CHGAP10645 457 aaKnown RBP23.16■■□□□ 1.3
TUBB3-201ENST00000315491 ADGRB3O60242 1522 aa23.16■■□□□ 1.3
TUBB3-201ENST00000315491 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
TUBB3-201ENST00000315491 PTPRMP28827 1452 aa23.1■■□□□ 1.29
TUBB3-201ENST00000315491 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
TUBB3-201ENST00000315491 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
TUBB3-201ENST00000315491 NLRP1Q9C000 1473 aa23.09■■□□□ 1.29
TUBB3-201ENST00000315491 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
TUBB3-201ENST00000315491 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
TUBB3-201ENST00000315491 RPGRIP1LQ68CZ1 1315 aa23.06■■□□□ 1.28
TUBB3-201ENST00000315491 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
TUBB3-201ENST00000315491 STAC3Q96MF2 364 aa23.05■■□□□ 1.28
TUBB3-201ENST00000315491 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
TUBB3-201ENST00000315491 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
TUBB3-201ENST00000315491 KDM4FA0A1W2PPD8 638 aa23.03■■□□□ 1.28
TUBB3-201ENST00000315491 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
TUBB3-201ENST00000315491 MYOM2P54296 1465 aa23.01■■□□□ 1.27
TUBB3-201ENST00000315491 IFT172Q9UG01 1749 aa23.01■■□□□ 1.27
TUBB3-201ENST00000315491 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
TUBB3-201ENST00000315491 PRAG1Q86YV5 1406 aa23.01■■□□□ 1.27
TUBB3-201ENST00000315491 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms