RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
PDE4D-201ENST00000309641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDE4D-201ENST00000309641 EIF2AK4Q9P2K8 1649 aaKnown RBP13.74□□□□□ -0.21
PDE4D-201ENST00000309641 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
PDE4D-201ENST00000309641 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
PDE4D-201ENST00000309641 PTPRMP28827 1452 aa13.73□□□□□ -0.21
PDE4D-201ENST00000309641 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
PDE4D-201ENST00000309641 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.21
PDE4D-201ENST00000309641 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
PDE4D-201ENST00000309641 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
PDE4D-201ENST00000309641 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
PDE4D-201ENST00000309641 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
PDE4D-201ENST00000309641 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
PDE4D-201ENST00000309641 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
PDE4D-201ENST00000309641 ABCC3O15438 1527 aa13.68□□□□□ -0.22
PDE4D-201ENST00000309641 CEP152O94986 1710 aa13.68□□□□□ -0.22
PDE4D-201ENST00000309641 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
PDE4D-201ENST00000309641 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
PDE4D-201ENST00000309641 C3P01024 1663 aa13.67□□□□□ -0.22
PDE4D-201ENST00000309641 CNTLNQ9NXG0 1405 aa13.67□□□□□ -0.22
PDE4D-201ENST00000309641 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
PDE4D-201ENST00000309641 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
PDE4D-201ENST00000309641 UNC13BO14795 1591 aa13.65□□□□□ -0.22
PDE4D-201ENST00000309641 NUP155O75694 1391 aa13.64□□□□□ -0.23
PDE4D-201ENST00000309641 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
PDE4D-201ENST00000309641 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
PDE4D-201ENST00000309641 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
PDE4D-201ENST00000309641 KANK1Q14678 1352 aa13.63□□□□□ -0.23
PDE4D-201ENST00000309641 RAB3GAP2Q9H2M9 1393 aa13.63□□□□□ -0.23
PDE4D-201ENST00000309641 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
PDE4D-201ENST00000309641 CAMSAP1Q5T5Y3 1602 aa13.62□□□□□ -0.23
PDE4D-201ENST00000309641 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
PDE4D-201ENST00000309641 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
PDE4D-201ENST00000309641 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
PDE4D-201ENST00000309641 NPATQ14207 1427 aa13.61□□□□□ -0.23
PDE4D-201ENST00000309641 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
PDE4D-201ENST00000309641 PZPP20742 1482 aa13.61□□□□□ -0.23
PDE4D-201ENST00000309641 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
PDE4D-201ENST00000309641 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
PDE4D-201ENST00000309641 TET3O43151 1660 aa13.57□□□□□ -0.24
PDE4D-201ENST00000309641 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
PDE4D-201ENST00000309641 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
PDE4D-201ENST00000309641 E9PCH4 1651 aa13.56□□□□□ -0.24
PDE4D-201ENST00000309641 TNRQ92752 1358 aa13.55□□□□□ -0.24
PDE4D-201ENST00000309641 FOXD1Q16676 465 aa13.55□□□□□ -0.24
PDE4D-201ENST00000309641 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
PDE4D-201ENST00000309641 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
PDE4D-201ENST00000309641 SPATA31D1Q6ZQQ2 1576 aa13.55□□□□□ -0.24
PDE4D-201ENST00000309641 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
PDE4D-201ENST00000309641 LMTK3Q96Q04 1460 aa13.54□□□□□ -0.24
PDE4D-201ENST00000309641 HSPA2P54652 639 aa13.54□□□□□ -0.24
PDE4D-201ENST00000309641 PKD2Q13563 968 aa13.54□□□□□ -0.24
PDE4D-201ENST00000309641 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
PDE4D-201ENST00000309641 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
PDE4D-201ENST00000309641 NOS1P29475 1434 aa13.53□□□□□ -0.24
PDE4D-201ENST00000309641 SYNMO15061 1565 aa13.52□□□□□ -0.24
PDE4D-201ENST00000309641 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.25
PDE4D-201ENST00000309641 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
PDE4D-201ENST00000309641 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
PDE4D-201ENST00000309641 HRCP23327 699 aa13.51□□□□□ -0.25
PDE4D-201ENST00000309641 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
PDE4D-201ENST00000309641 IDI1Q13907 227 aa13.5□□□□□ -0.25
PDE4D-201ENST00000309641 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
PDE4D-201ENST00000309641 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
PDE4D-201ENST00000309641 PTPRTO14522 1441 aa13.47□□□□□ -0.25
PDE4D-201ENST00000309641 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
PDE4D-201ENST00000309641 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
PDE4D-201ENST00000309641 SPHKAPQ2M3C7 1700 aa13.46□□□□□ -0.25
PDE4D-201ENST00000309641 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
PDE4D-201ENST00000309641 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
PDE4D-201ENST00000309641 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
PDE4D-201ENST00000309641 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
PDE4D-201ENST00000309641 TRPM2O94759 1503 aa13.43□□□□□ -0.26
PDE4D-201ENST00000309641 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
PDE4D-201ENST00000309641 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
PDE4D-201ENST00000309641 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
PDE4D-201ENST00000309641 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
PDE4D-201ENST00000309641 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
PDE4D-201ENST00000309641 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
PDE4D-201ENST00000309641 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.26
PDE4D-201ENST00000309641 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
PDE4D-201ENST00000309641 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
PDE4D-201ENST00000309641 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
PDE4D-201ENST00000309641 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
PDE4D-201ENST00000309641 DHX57Q6P158 1386 aaKnown RBP13.39□□□□□ -0.27
PDE4D-201ENST00000309641 LTKP29376 864 aa13.37□□□□□ -0.27
PDE4D-201ENST00000309641 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
PDE4D-201ENST00000309641 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
PDE4D-201ENST00000309641 CCDC144AA2RUR9 1427 aa13.37□□□□□ -0.27
PDE4D-201ENST00000309641 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
PDE4D-201ENST00000309641 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
PDE4D-201ENST00000309641 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
PDE4D-201ENST00000309641 SLIT1O75093 1534 aa13.35□□□□□ -0.27
PDE4D-201ENST00000309641 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
PDE4D-201ENST00000309641 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
PDE4D-201ENST00000309641 ANKLE2Q86XL3 938 aa13.34□□□□□ -0.27
PDE4D-201ENST00000309641 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
PDE4D-201ENST00000309641 ZFYVE9O95405 1425 aa13.33□□□□□ -0.27
PDE4D-201ENST00000309641 KIF1BO60333 1816 aa13.33□□□□□ -0.28
PDE4D-201ENST00000309641 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms