RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 ATP10AO60312 1499 aa22.86■■□□□ 1.25
PIKFYVE-202ENST00000308862 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
PIKFYVE-202ENST00000308862 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
PIKFYVE-202ENST00000308862 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
PIKFYVE-202ENST00000308862 PRDM15P57071 1507 aaPredicted RBP22.83■■□□□ 1.25
PIKFYVE-202ENST00000308862 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.24
PIKFYVE-202ENST00000308862 MROH1Q8NDA8 1641 aa22.83■■□□□ 1.24
PIKFYVE-202ENST00000308862 PZPP20742 1482 aa22.82■■□□□ 1.24
PIKFYVE-202ENST00000308862 SIGLEC1Q9BZZ2 1709 aa22.8■■□□□ 1.24
PIKFYVE-202ENST00000308862 FAM135AQ9P2D6 1515 aa22.8■■□□□ 1.24
PIKFYVE-202ENST00000308862 NUP155O75694 1391 aa22.79■■□□□ 1.24
PIKFYVE-202ENST00000308862 KIF3BO15066 747 aa22.79■■□□□ 1.24
PIKFYVE-202ENST00000308862 AGLP35573 1532 aa22.78■■□□□ 1.24
PIKFYVE-202ENST00000308862 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
PIKFYVE-202ENST00000308862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.239e-9■■□□□ 12.6
PIKFYVE-202ENST00000308862 MPHOSPH9Q99550 1183 aa22.74■■□□□ 1.23
PIKFYVE-202ENST00000308862 SLC4A1APQ9BWU0 796 aaKnown RBP22.73■■□□□ 1.23
PIKFYVE-202ENST00000308862 KANK1Q14678 1352 aa22.73■■□□□ 1.23
PIKFYVE-202ENST00000308862 CEP152O94986 1710 aa22.72■■□□□ 1.23
PIKFYVE-202ENST00000308862 TET3O43151 1660 aa22.71■■□□□ 1.23
PIKFYVE-202ENST00000308862 ZC3H13Q5T200 1668 aaKnown RBP22.7■■□□□ 1.22
PIKFYVE-202ENST00000308862 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
PIKFYVE-202ENST00000308862 LMTK2Q8IWU2 1503 aa22.67■■□□□ 1.22
PIKFYVE-202ENST00000308862 GGT6Q6P531 493 aa22.67■■□□□ 1.22
PIKFYVE-202ENST00000308862 ABCC3O15438 1527 aa22.66■■□□□ 1.22
PIKFYVE-202ENST00000308862 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
PIKFYVE-202ENST00000308862 E9PCH4 1651 aa22.65■■□□□ 1.22
PIKFYVE-202ENST00000308862 PKD2Q13563 968 aa22.64■■□□□ 1.22
PIKFYVE-202ENST00000308862 CAMSAP1Q5T5Y3 1602 aa22.64■■□□□ 1.22
PIKFYVE-202ENST00000308862 FOXD1Q16676 465 aa22.62■■□□□ 1.21
PIKFYVE-202ENST00000308862 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
PIKFYVE-202ENST00000308862 WASHC2CQ9Y4E1 1318 aa22.58■■□□□ 1.21
PIKFYVE-202ENST00000308862 CLTCQ00610 1675 aaKnown RBP22.58■■□□□ 1.21
PIKFYVE-202ENST00000308862 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
PIKFYVE-202ENST00000308862 MLECQ14165 292 aa22.57■■□□□ 1.2
PIKFYVE-202ENST00000308862 SPHKAPQ2M3C7 1700 aa22.57■■□□□ 1.2
PIKFYVE-202ENST00000308862 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
PIKFYVE-202ENST00000308862 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
PIKFYVE-202ENST00000308862 NPATQ14207 1427 aa22.53■■□□□ 1.2
PIKFYVE-202ENST00000308862 TRPM2O94759 1503 aa22.52■■□□□ 1.2
PIKFYVE-202ENST00000308862 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.19
PIKFYVE-202ENST00000308862 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
PIKFYVE-202ENST00000308862 ARHGAP31Q2M1Z3 1444 aa22.51■■□□□ 1.19
PIKFYVE-202ENST00000308862 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
PIKFYVE-202ENST00000308862 MROH2AA6NES4 1674 aa22.5■■□□□ 1.19
PIKFYVE-202ENST00000308862 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
PIKFYVE-202ENST00000308862 PTPRTO14522 1441 aa22.48■■□□□ 1.19
PIKFYVE-202ENST00000308862 CNTLNQ9NXG0 1405 aa22.47■■□□□ 1.19
PIKFYVE-202ENST00000308862 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
PIKFYVE-202ENST00000308862 PREX1Q8TCU6 1659 aa22.47■■□□□ 1.19
PIKFYVE-202ENST00000308862 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
PIKFYVE-202ENST00000308862 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
PIKFYVE-202ENST00000308862 CLTCL1P53675 1640 aa22.45■■□□□ 1.18
PIKFYVE-202ENST00000308862 MADDQ8WXG6 1647 aa22.43■■□□□ 1.18
PIKFYVE-202ENST00000308862 SYNMO15061 1565 aa22.42■■□□□ 1.18
PIKFYVE-202ENST00000308862 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
PIKFYVE-202ENST00000308862 NOS1P29475 1434 aa22.42■■□□□ 1.18
PIKFYVE-202ENST00000308862 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
PIKFYVE-202ENST00000308862 CFAP65Q6ZU64 1925 aaKnown RBP22.41■■□□□ 1.18
PIKFYVE-202ENST00000308862 UGGT1Q9NYU2 1555 aa22.41■■□□□ 1.18
PIKFYVE-202ENST00000308862 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
PIKFYVE-202ENST00000308862 RIMS1Q86UR5 1692 aaKnown RBP22.4■■□□□ 1.18
PIKFYVE-202ENST00000308862 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.17
PIKFYVE-202ENST00000308862 C3P01024 1663 aa22.38■■□□□ 1.17
PIKFYVE-202ENST00000308862 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
PIKFYVE-202ENST00000308862 PIK3C2BO00750 1634 aa22.38■■□□□ 1.17
PIKFYVE-202ENST00000308862 KIF1BO60333 1816 aa22.34■■□□□ 1.17
PIKFYVE-202ENST00000308862 TIMELESSQ9UNS1 1208 aa22.34■■□□□ 1.17
PIKFYVE-202ENST00000308862 FBXO31Q5XUX0 539 aaPredicted RBP22.31■■□□□ 1.16
PIKFYVE-202ENST00000308862 NEURL4Q96JN8 1562 aa22.31■■□□□ 1.16
PIKFYVE-202ENST00000308862 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
PIKFYVE-202ENST00000308862 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
PIKFYVE-202ENST00000308862 ILDR1Q86SU0 546 aaPredicted RBP22.28■■□□□ 1.16
PIKFYVE-202ENST00000308862 TNRQ92752 1358 aa22.26■■□□□ 1.15
PIKFYVE-202ENST00000308862 L3MBTL2Q969R5 705 aa22.25■■□□□ 1.15
PIKFYVE-202ENST00000308862 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
PIKFYVE-202ENST00000308862 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
PIKFYVE-202ENST00000308862 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
PIKFYVE-202ENST00000308862 IFT172Q9UG01 1749 aa22.22■■□□□ 1.15
PIKFYVE-202ENST00000308862 MYO5BQ9ULV0 1848 aa22.22■■□□□ 1.15
PIKFYVE-202ENST00000308862 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
PIKFYVE-202ENST00000308862 MYO3AQ8NEV4 1616 aa22.21■■□□□ 1.15
PIKFYVE-202ENST00000308862 IDI1Q13907 227 aa22.2■■□□□ 1.15
PIKFYVE-202ENST00000308862 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.15
PIKFYVE-202ENST00000308862 PTPRMP28827 1452 aa22.19■■□□□ 1.14
PIKFYVE-202ENST00000308862 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
PIKFYVE-202ENST00000308862 CHGAP10645 457 aaKnown RBP22.19■■□□□ 1.14
PIKFYVE-202ENST00000308862 NLRP1Q9C000 1473 aa22.18■■□□□ 1.14
PIKFYVE-202ENST00000308862 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
PIKFYVE-202ENST00000308862 PPLO60437 1756 aa22.17■■□□□ 1.14
PIKFYVE-202ENST00000308862 UBR1Q8IWV7 1749 aa22.16■■□□□ 1.14
PIKFYVE-202ENST00000308862 DCAF11Q8TEB1 546 aa22.16■■□□□ 1.14
PIKFYVE-202ENST00000308862 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
PIKFYVE-202ENST00000308862 A2ML1A8K2U0 1454 aa22.14■■□□□ 1.13
PIKFYVE-202ENST00000308862 MYOM2P54296 1465 aa22.14■■□□□ 1.13
PIKFYVE-202ENST00000308862 UHRF1BP1Q6BDS2 1440 aa22.13■■□□□ 1.13
PIKFYVE-202ENST00000308862 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
PIKFYVE-202ENST00000308862 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
PIKFYVE-202ENST00000308862 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
PIKFYVE-202ENST00000308862 PRAG1Q86YV5 1406 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms