RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
PIKFYVE-202ENST00000308862 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
PIKFYVE-202ENST00000308862 ABCC9O60706 1549 aa30.41■■■□□ 2.46
PIKFYVE-202ENST00000308862 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
PIKFYVE-202ENST00000308862 DCAF1Q9Y4B6 1507 aa29.93■■■□□ 2.38
PIKFYVE-202ENST00000308862 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
PIKFYVE-202ENST00000308862 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
PIKFYVE-202ENST00000308862 NACADO15069 1562 aa29.71■■■□□ 2.35
PIKFYVE-202ENST00000308862 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
PIKFYVE-202ENST00000308862 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
PIKFYVE-202ENST00000308862 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
PIKFYVE-202ENST00000308862 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
PIKFYVE-202ENST00000308862 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
PIKFYVE-202ENST00000308862 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
PIKFYVE-202ENST00000308862 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
PIKFYVE-202ENST00000308862 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
PIKFYVE-202ENST00000308862 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
PIKFYVE-202ENST00000308862 MROH2BQ7Z745 1585 aa27.9■■■□□ 2.06
PIKFYVE-202ENST00000308862 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
PIKFYVE-202ENST00000308862 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
PIKFYVE-202ENST00000308862 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
PIKFYVE-202ENST00000308862 WIZO95785 1651 aa27.67■■■□□ 2.02
PIKFYVE-202ENST00000308862 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
PIKFYVE-202ENST00000308862 SMARCA2P51531 1590 aa27.57■■■□□ 2
PIKFYVE-202ENST00000308862 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
PIKFYVE-202ENST00000308862 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
PIKFYVE-202ENST00000308862 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
PIKFYVE-202ENST00000308862 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
PIKFYVE-202ENST00000308862 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
PIKFYVE-202ENST00000308862 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
PIKFYVE-202ENST00000308862 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
PIKFYVE-202ENST00000308862 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
PIKFYVE-202ENST00000308862 CFTRP13569 1480 aa26.64■■□□□ 1.86
PIKFYVE-202ENST00000308862 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
PIKFYVE-202ENST00000308862 PRDM2Q13029 1718 aa26.61■■□□□ 1.85
PIKFYVE-202ENST00000308862 LAMC3Q9Y6N6 1575 aa26.59■■□□□ 1.85
PIKFYVE-202ENST00000308862 NESP48681 1621 aa26.55■■□□□ 1.84
PIKFYVE-202ENST00000308862 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
PIKFYVE-202ENST00000308862 ABCC8Q09428 1581 aa26.35■■□□□ 1.81
PIKFYVE-202ENST00000308862 PDS5BQ9NTI5 1447 aa26.33■■□□□ 1.81
PIKFYVE-202ENST00000308862 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
PIKFYVE-202ENST00000308862 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
PIKFYVE-202ENST00000308862 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
PIKFYVE-202ENST00000308862 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
PIKFYVE-202ENST00000308862 SYNJ1O43426 1573 aa26.18■■□□□ 1.78
PIKFYVE-202ENST00000308862 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
PIKFYVE-202ENST00000308862 CUX1P39880 1505 aa26.13■■□□□ 1.77
PIKFYVE-202ENST00000308862 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
PIKFYVE-202ENST00000308862 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
PIKFYVE-202ENST00000308862 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
PIKFYVE-202ENST00000308862 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
PIKFYVE-202ENST00000308862 MRC2Q9UBG0 1479 aa26.06■■□□□ 1.76
PIKFYVE-202ENST00000308862 URB2Q14146 1524 aaKnown RBP26.06■■□□□ 1.76
PIKFYVE-202ENST00000308862 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
PIKFYVE-202ENST00000308862 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
PIKFYVE-202ENST00000308862 WDR62O43379 1518 aa25.97■■□□□ 1.75
PIKFYVE-202ENST00000308862 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
PIKFYVE-202ENST00000308862 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
PIKFYVE-202ENST00000308862 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
PIKFYVE-202ENST00000308862 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
PIKFYVE-202ENST00000308862 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
PIKFYVE-202ENST00000308862 SOGA1O94964 1423 aa25.72■■□□□ 1.71
PIKFYVE-202ENST00000308862 CUX2O14529 1486 aa25.72■■□□□ 1.71
PIKFYVE-202ENST00000308862 TARBP1Q13395 1621 aaKnown RBP25.71■■□□□ 1.71
PIKFYVE-202ENST00000308862 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
PIKFYVE-202ENST00000308862 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
PIKFYVE-202ENST00000308862 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
PIKFYVE-202ENST00000308862 EEA1Q15075 1411 aa25.62■■□□□ 1.69
PIKFYVE-202ENST00000308862 KIF27Q86VH2 1401 aa25.6■■□□□ 1.69
PIKFYVE-202ENST00000308862 ABCA5Q8WWZ7 1642 aa25.57■■□□□ 1.68
PIKFYVE-202ENST00000308862 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
PIKFYVE-202ENST00000308862 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
PIKFYVE-202ENST00000308862 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
PIKFYVE-202ENST00000308862 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
PIKFYVE-202ENST00000308862 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
PIKFYVE-202ENST00000308862 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
PIKFYVE-202ENST00000308862 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.66
PIKFYVE-202ENST00000308862 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
PIKFYVE-202ENST00000308862 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
PIKFYVE-202ENST00000308862 CUL7Q14999 1698 aa25.37■■□□□ 1.65
PIKFYVE-202ENST00000308862 KIF21BO75037 1637 aa25.36■■□□□ 1.65
PIKFYVE-202ENST00000308862 IGF1RP08069 1367 aa25.36■■□□□ 1.65
PIKFYVE-202ENST00000308862 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
PIKFYVE-202ENST00000308862 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
PIKFYVE-202ENST00000308862 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
PIKFYVE-202ENST00000308862 SNAPC4Q5SXM2 1469 aa25.26■■□□□ 1.63
PIKFYVE-202ENST00000308862 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
PIKFYVE-202ENST00000308862 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
PIKFYVE-202ENST00000308862 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
PIKFYVE-202ENST00000308862 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
PIKFYVE-202ENST00000308862 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
PIKFYVE-202ENST00000308862 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PIKFYVE-202ENST00000308862 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
PIKFYVE-202ENST00000308862 SYNJ2O15056 1496 aa25.11■■□□□ 1.61
PIKFYVE-202ENST00000308862 GRIN2AQ12879 1464 aa25.06■■□□□ 1.6
PIKFYVE-202ENST00000308862 UBTFP17480 764 aaKnown RBP25.05■■□□□ 1.6
PIKFYVE-202ENST00000308862 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
PIKFYVE-202ENST00000308862 CHD1O14646 1710 aa25.03■■□□□ 1.6
PIKFYVE-202ENST00000308862 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
PIKFYVE-202ENST00000308862 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms