RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 BCANQ96GW7 911 aa14.32□□□□□ -0.12
APOBEC3F-201ENST00000308521 RAPGEF3O95398 923 aa14.31□□□□□ -0.12
APOBEC3F-201ENST00000308521 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
APOBEC3F-201ENST00000308521 MAST1Q9Y2H9 1570 aa14.3□□□□□ -0.12
APOBEC3F-201ENST00000308521 ZNF326Q5BKZ1 582 aaKnown RBP14.29□□□□□ -0.12
APOBEC3F-201ENST00000308521 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
APOBEC3F-201ENST00000308521 NBPF8Q3BBV2 869 aa14.28□□□□□ -0.12
APOBEC3F-201ENST00000308521 RPRD2Q5VT52 1461 aaKnown RBP14.28□□□□□ -0.12
APOBEC3F-201ENST00000308521 KIF3BO15066 747 aa14.28□□□□□ -0.12
APOBEC3F-201ENST00000308521 PIAS4Q8N2W9 510 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3F-201ENST00000308521 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
APOBEC3F-201ENST00000308521 DUOX2Q9NRD8 1548 aa14.26□□□□□ -0.13
APOBEC3F-201ENST00000308521 FAM135AQ9P2D6 1515 aa14.26□□□□□ -0.13
APOBEC3F-201ENST00000308521 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
APOBEC3F-201ENST00000308521 PLXNC1O60486 1568 aa14.25□□□□□ -0.13
APOBEC3F-201ENST00000308521 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
APOBEC3F-201ENST00000308521 RGL3Q3MIN7 710 aa14.24□□□□□ -0.13
APOBEC3F-201ENST00000308521 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
APOBEC3F-201ENST00000308521 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
APOBEC3F-201ENST00000308521 ERBINQ96RT1 1412 aa14.22□□□□□ -0.13
APOBEC3F-201ENST00000308521 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.13
APOBEC3F-201ENST00000308521 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
APOBEC3F-201ENST00000308521 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
APOBEC3F-201ENST00000308521 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
APOBEC3F-201ENST00000308521 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
APOBEC3F-201ENST00000308521 GGT6Q6P531 493 aa14.2□□□□□ -0.14
APOBEC3F-201ENST00000308521 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
APOBEC3F-201ENST00000308521 DHX29Q7Z478 1369 aaKnown RBP14.19□□□□□ -0.14
APOBEC3F-201ENST00000308521 POGZQ7Z3K3 1410 aa14.19□□□□□ -0.14
APOBEC3F-201ENST00000308521 INO80Q9ULG1 1556 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3F-201ENST00000308521 UNC13BO14795 1591 aa14.18□□□□□ -0.14
APOBEC3F-201ENST00000308521 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
APOBEC3F-201ENST00000308521 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
APOBEC3F-201ENST00000308521 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
APOBEC3F-201ENST00000308521 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
APOBEC3F-201ENST00000308521 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
APOBEC3F-201ENST00000308521 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
APOBEC3F-201ENST00000308521 FANCIQ9NVI1 1328 aa14.14□□□□□ -0.15
APOBEC3F-201ENST00000308521 NEO1Q92859 1461 aa14.14□□□□□ -0.15
APOBEC3F-201ENST00000308521 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
APOBEC3F-201ENST00000308521 A2MP01023 1474 aa14.13□□□□□ -0.15
APOBEC3F-201ENST00000308521 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
APOBEC3F-201ENST00000308521 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
APOBEC3F-201ENST00000308521 KANK1Q14678 1352 aa14.12□□□□□ -0.15
APOBEC3F-201ENST00000308521 CFAP74Q9C0B2 1584 aa14.12□□□□□ -0.15
APOBEC3F-201ENST00000308521 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
APOBEC3F-201ENST00000308521 YEATS2Q9ULM3 1422 aa14.12□□□□□ -0.15
APOBEC3F-201ENST00000308521 MLH3Q9UHC1 1453 aa14.11□□□□□ -0.15
APOBEC3F-201ENST00000308521 KDM5CP41229 1560 aa14.11□□□□□ -0.15
APOBEC3F-201ENST00000308521 GLI2P10070 1586 aa14.1□□□□□ -0.15
APOBEC3F-201ENST00000308521 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
APOBEC3F-201ENST00000308521 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
APOBEC3F-201ENST00000308521 WASHC2CQ9Y4E1 1318 aa14.09□□□□□ -0.15
APOBEC3F-201ENST00000308521 MSH5O43196 834 aa14.08□□□□□ -0.15
APOBEC3F-201ENST00000308521 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 CFAP65Q6ZU64 1925 aaKnown RBP14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 E9PCH4 1651 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 FRMPD1Q5SYB0 1578 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
APOBEC3F-201ENST00000308521 NBPF1Q3BBV0 1214 aa14.07□□□□□ -0.16
APOBEC3F-201ENST00000308521 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
APOBEC3F-201ENST00000308521 ATP10AO60312 1499 aa14.06□□□□□ -0.16
APOBEC3F-201ENST00000308521 DEPDC5O75140 1603 aa14.06□□□□□ -0.16
APOBEC3F-201ENST00000308521 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
APOBEC3F-201ENST00000308521 RICTORQ6R327 1708 aa14.05□□□□□ -0.16
APOBEC3F-201ENST00000308521 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
APOBEC3F-201ENST00000308521 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
APOBEC3F-201ENST00000308521 MLECQ14165 292 aa14.04□□□□□ -0.16
APOBEC3F-201ENST00000308521 PPRC1Q5VV67 1664 aaKnown RBP14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 UGGT1Q9NYU2 1555 aa14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 COL17A1Q9UMD9 1497 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 USP47Q96K76 1375 aa14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 PRDM15P57071 1507 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 DIP2CQ9Y2E4 1556 aa14.03□□□□□ -0.16
APOBEC3F-201ENST00000308521 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
APOBEC3F-201ENST00000308521 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.17
APOBEC3F-201ENST00000308521 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.17
APOBEC3F-201ENST00000308521 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 SPATA31E1Q6ZUB1 1445 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 PTPRTO14522 1441 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 KIF13AQ9H1H9 1805 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 TET3O43151 1660 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 CEP152O94986 1710 aa14.01□□□□□ -0.17
APOBEC3F-201ENST00000308521 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
APOBEC3F-201ENST00000308521 KIF7Q2M1P5 1343 aa13.99□□□□□ -0.17
APOBEC3F-201ENST00000308521 NPATQ14207 1427 aa13.99□□□□□ -0.17
APOBEC3F-201ENST00000308521 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
APOBEC3F-201ENST00000308521 TRPM2O94759 1503 aa13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 RALGAPBQ86X10 1494 aa13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 CCDC7Q96M83 1385 aa13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 DEKP35659 375 aaKnown RBP13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3F-201ENST00000308521 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms