RNA–Protein interactions for RNA: ENST00000308064.6

CHST1-201, Transcript of carbohydrate sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-201ENST00000308064 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
CHST1-201ENST00000308064 PLA2R1Q13018 1463 aa27.51■■□□□ 1.99
CHST1-201ENST00000308064 RGL3Q3MIN7 710 aa27.5■■□□□ 1.99
CHST1-201ENST00000308064 RSPH4AQ5TD94 716 aa27.49■■□□□ 1.99
CHST1-201ENST00000308064 PPP4R2Q9NY27 417 aa27.49■■□□□ 1.99
CHST1-201ENST00000308064 CCDC144AA2RUR9 1427 aa27.49■■□□□ 1.99
CHST1-201ENST00000308064 ANP32EQ9BTT0 268 aa27.48■■□□□ 1.99
CHST1-201ENST00000308064 PRAG1Q86YV5 1406 aa27.47■■□□□ 1.99
CHST1-201ENST00000308064 ERICH6BQ5W0A0 696 aa27.47■■□□□ 1.99
CHST1-201ENST00000308064 B4GALNT3Q6L9W6 998 aa27.47■■□□□ 1.99
CHST1-201ENST00000308064 PLEKHH2Q8IVE3 1493 aa27.46■■□□□ 1.99
CHST1-201ENST00000308064 UNC13BO14795 1591 aa27.46■■□□□ 1.99
CHST1-201ENST00000308064 MAST1Q9Y2H9 1570 aa27.46■■□□□ 1.99
CHST1-201ENST00000308064 NBPF1Q3BBV0 1214 aa27.46■■□□□ 1.99
CHST1-201ENST00000308064 PNISRQ8TF01 805 aaKnown RBP27.46■■□□□ 1.99
CHST1-201ENST00000308064 ABCC2Q92887 1545 aa27.45■■□□□ 1.99
CHST1-201ENST00000308064 TRPM1Q7Z4N2 1603 aa27.45■■□□□ 1.98
CHST1-201ENST00000308064 MYO5CQ9NQX4 1742 aa27.43■■□□□ 1.98
CHST1-201ENST00000308064 SMG6Q86US8 1419 aaKnown RBP27.43■■□□□ 1.98
CHST1-201ENST00000308064 TMC1Q8TDI8 760 aa27.42■■□□□ 1.98
CHST1-201ENST00000308064 A2MP01023 1474 aa27.42■■□□□ 1.98
CHST1-201ENST00000308064 E9PCH4 1651 aa27.42■■□□□ 1.98
CHST1-201ENST00000308064 PLXNC1O60486 1568 aa27.38■■□□□ 1.97
CHST1-201ENST00000308064 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
CHST1-201ENST00000308064 IQGAP3Q86VI3 1631 aa27.37■■□□□ 1.97
CHST1-201ENST00000308064 MSH5O43196 834 aa27.33■■□□□ 1.97
CHST1-201ENST00000308064 MYBBP1AQ9BQG0 1328 aaKnown RBP27.33■■□□□ 1.97
CHST1-201ENST00000308064 LRPPRCP42704 1394 aaKnown RBP27.32■■□□□ 1.96
CHST1-201ENST00000308064 DUOX2Q9NRD8 1548 aa27.31■■□□□ 1.96
CHST1-201ENST00000308064 GPRASP1Q5JY77 1395 aa27.31■■□□□ 1.96
CHST1-201ENST00000308064 ZCCHC11Q5TAX3 1644 aaKnown RBP27.31■■□□□ 1.96
CHST1-201ENST00000308064 PLCH2O75038 1416 aa27.3■■□□□ 1.96
CHST1-201ENST00000308064 BRD4O60885 1362 aaPredicted RBP27.29■■□□□ 1.96
CHST1-201ENST00000308064 DISP3Q9P2K9 1392 aa27.29■■□□□ 1.96
CHST1-201ENST00000308064 RALBP1Q15311 655 aa27.29■■□□□ 1.96
CHST1-201ENST00000308064 MAGI2Q86UL8 1455 aa27.28■■□□□ 1.96
CHST1-201ENST00000308064 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
CHST1-201ENST00000308064 RNF123Q5XPI4 1314 aa27.27■■□□□ 1.96
CHST1-201ENST00000308064 TESK2Q96S53 571 aa27.27■■□□□ 1.96
CHST1-201ENST00000308064 PRDM15P57071 1507 aaPredicted RBP27.27■■□□□ 1.96
CHST1-201ENST00000308064 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
CHST1-201ENST00000308064 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
CHST1-201ENST00000308064 COL17A1Q9UMD9 1497 aaPredicted RBP27.25■■□□□ 1.95
CHST1-201ENST00000308064 ABCC1P33527 1531 aa27.24■■□□□ 1.95
CHST1-201ENST00000308064 PARD3Q8TEW0 1356 aa27.24■■□□□ 1.95
CHST1-201ENST00000308064 KTN1Q86UP2 1357 aaKnown RBP27.23■■□□□ 1.95
CHST1-201ENST00000308064 EFCAB2Q5VUJ9 269 aa27.23■■□□□ 1.95
CHST1-201ENST00000308064 ATP10AO60312 1499 aa27.22■■□□□ 1.95
CHST1-201ENST00000308064 LAMC1P11047 1609 aa27.2■■□□□ 1.95
CHST1-201ENST00000308064 CLASP1Q7Z460 1538 aa27.2■■□□□ 1.95
CHST1-201ENST00000308064 FANCIQ9NVI1 1328 aa27.2■■□□□ 1.94
CHST1-201ENST00000308064 SALL2Q9Y467 1007 aaPredicted RBP27.2■■□□□ 1.94
CHST1-201ENST00000308064 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
CHST1-201ENST00000308064 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
CHST1-201ENST00000308064 CC2D1BQ5T0F9 858 aaKnown RBP27.18■■□□□ 1.94
CHST1-201ENST00000308064 EIF2AK4Q9P2K8 1649 aaKnown RBP27.16■■□□□ 1.94
CHST1-201ENST00000308064 UHRF1BP1LA0JNW5 1464 aa27.15■■□□□ 1.94
CHST1-201ENST00000308064 PANK3Q9H999 370 aa27.15■■□□□ 1.94
CHST1-201ENST00000308064 SPAG9O60271 1321 aaKnown RBP27.12■■□□□ 1.93
CHST1-201ENST00000308064 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
CHST1-201ENST00000308064 CCDC136Q96JN2 1154 aa27.1■■□□□ 1.93
CHST1-201ENST00000308064 ZFYVE16Q7Z3T8 1539 aa27.1■■□□□ 1.93
CHST1-201ENST00000308064 TMF1P82094 1093 aa27.09■■□□□ 1.93
CHST1-201ENST00000308064 MADDQ8WXG6 1647 aa27.07■■□□□ 1.92
CHST1-201ENST00000308064 CDCA7LQ96GN5 454 aa27.04■■□□□ 1.92
CHST1-201ENST00000308064 TRPM2O94759 1503 aa27.03■■□□□ 1.92
CHST1-201ENST00000308064 CLTCL1P53675 1640 aa27.02■■□□□ 1.92
CHST1-201ENST00000308064 RRP1P56182 461 aaKnown RBP27.02■■□□□ 1.92
CHST1-201ENST00000308064 RTEL1-TNFRSF6BF6WH68 1400 aa27.01■■□□□ 1.91
CHST1-201ENST00000308064 WASHC2CQ9Y4E1 1318 aa27.01■■□□□ 1.91
CHST1-201ENST00000308064 SPHKAPQ2M3C7 1700 aa27■■□□□ 1.91
CHST1-201ENST00000308064 WDR7Q9Y4E6 1490 aa27■■□□□ 1.91
CHST1-201ENST00000308064 RCAN3Q9UKA8 241 aa26.99■■□□□ 1.91
CHST1-201ENST00000308064 IQGAP1P46940 1657 aa26.99■■□□□ 1.91
CHST1-201ENST00000308064 PTPRTO14522 1441 aa26.98■■□□□ 1.91
CHST1-201ENST00000308064 DEPDC5O75140 1603 aa26.98■■□□□ 1.91
CHST1-201ENST00000308064 CEP152O94986 1710 aa26.97■■□□□ 1.91
CHST1-201ENST00000308064 EXOC6Q8TAG9 804 aa26.97■■□□□ 1.91
CHST1-201ENST00000308064 ARAP3Q8WWN8 1544 aa26.97■■□□□ 1.91
CHST1-201ENST00000308064 FANCAO15360 1455 aa26.96■■□□□ 1.91
CHST1-201ENST00000308064 BLMP54132 1417 aaPredicted RBP26.96■■□□□ 1.91
CHST1-201ENST00000308064 ATP7AQ04656 1500 aa26.95■■□□□ 1.9
CHST1-201ENST00000308064 INO80Q9ULG1 1556 aaPredicted RBP26.93■■□□□ 1.9
CHST1-201ENST00000308064 KIF3BO15066 747 aa26.93■■□□□ 1.9
CHST1-201ENST00000308064 ABCA9Q8IUA7 1624 aa26.92■■□□□ 1.9
CHST1-201ENST00000308064 SCAPERQ9BY12 1400 aa26.92■■□□□ 1.9
CHST1-201ENST00000308064 TET3O43151 1660 aa26.92■■□□□ 1.9
CHST1-201ENST00000308064 PDE3BQ13370 1112 aa26.91■■□□□ 1.9
CHST1-201ENST00000308064 MYT1LQ9UL68 1186 aa26.91■■□□□ 1.9
CHST1-201ENST00000308064 UGGT1Q9NYU2 1555 aa26.91■■□□□ 1.9
CHST1-201ENST00000308064 SCAF11Q99590 1463 aaKnown RBP26.9■■□□□ 1.9
CHST1-201ENST00000308064 VWDEQ8N2E2 1590 aa26.89■■□□□ 1.89
CHST1-201ENST00000308064 ADAMTS8Q9UP79 889 aa26.89■■□□□ 1.89
CHST1-201ENST00000308064 ERICH6Q7L0X2 663 aa26.88■■□□□ 1.89
CHST1-201ENST00000308064 AMER1Q5JTC6 1135 aaPredicted RBP26.88■■□□□ 1.89
CHST1-201ENST00000308064 ADGRL1O94910 1474 aa26.87■■□□□ 1.89
CHST1-201ENST00000308064 KNSTRNQ9Y448 316 aa26.87■■□□□ 1.89
CHST1-201ENST00000308064 PLIN1O60240 522 aa26.86■■□□□ 1.89
CHST1-201ENST00000308064 MROH1Q8NDA8 1641 aa26.86■■□□□ 1.89
CHST1-201ENST00000308064 PPP2R1AP30153 589 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms