RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
LRP8-201ENST00000306052 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
LRP8-201ENST00000306052 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
LRP8-201ENST00000306052 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
LRP8-201ENST00000306052 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
LRP8-201ENST00000306052 APBB1O00213 710 aa18.36■□□□□ 0.53
LRP8-201ENST00000306052 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
LRP8-201ENST00000306052 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
LRP8-201ENST00000306052 CUX1P39880 1505 aa18.34■□□□□ 0.53
LRP8-201ENST00000306052 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.53
LRP8-201ENST00000306052 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.52
LRP8-201ENST00000306052 TNNT3P45378 269 aaPredicted RBP18.32■□□□□ 0.52
LRP8-201ENST00000306052 GBP4Q96PP9 640 aa18.32■□□□□ 0.52
LRP8-201ENST00000306052 EIF3AQ14152 1382 aaKnown RBP18.32■□□□□ 0.52
LRP8-201ENST00000306052 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
LRP8-201ENST00000306052 FBXO3Q9UK99 471 aa18.31■□□□□ 0.52
LRP8-201ENST00000306052 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
LRP8-201ENST00000306052 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
LRP8-201ENST00000306052 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
LRP8-201ENST00000306052 GSE1Q14687 1217 aa18.3■□□□□ 0.52
LRP8-201ENST00000306052 MEX3CQ5U5Q3 659 aaKnown RBP18.3■□□□□ 0.52
LRP8-201ENST00000306052 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
LRP8-201ENST00000306052 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
LRP8-201ENST00000306052 MCCP23508 829 aa18.29■□□□□ 0.52
LRP8-201ENST00000306052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
LRP8-201ENST00000306052 CREBRFQ8IUR6 639 aa18.29■□□□□ 0.52
LRP8-201ENST00000306052 ZNF330Q9Y3S2 320 aaPredicted RBP18.28■□□□□ 0.52
LRP8-201ENST00000306052 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
LRP8-201ENST00000306052 LTV1Q96GA3 475 aaPredicted RBP18.27■□□□□ 0.52
LRP8-201ENST00000306052 USP35Q9P2H5 1018 aa18.27■□□□□ 0.51
LRP8-201ENST00000306052 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
LRP8-201ENST00000306052 PTMSP20962 102 aa18.25■□□□□ 0.51
LRP8-201ENST00000306052 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
LRP8-201ENST00000306052 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
LRP8-201ENST00000306052 AMPHP49418 695 aa18.24■□□□□ 0.51
LRP8-201ENST00000306052 EVA1CP58658 441 aa18.23■□□□□ 0.51
LRP8-201ENST00000306052 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
LRP8-201ENST00000306052 HSP90B1P14625 803 aaKnown RBP18.23■□□□□ 0.51
LRP8-201ENST00000306052 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
LRP8-201ENST00000306052 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
LRP8-201ENST00000306052 MS4A1P11836 297 aa18.21■□□□□ 0.51
LRP8-201ENST00000306052 RAPGEF3O95398 923 aa18.21■□□□□ 0.51
LRP8-201ENST00000306052 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
LRP8-201ENST00000306052 ATF3P18847 181 aa18.2■□□□□ 0.5
LRP8-201ENST00000306052 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
LRP8-201ENST00000306052 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
LRP8-201ENST00000306052 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
LRP8-201ENST00000306052 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
LRP8-201ENST00000306052 KIAA1211Q6ZU35 1233 aa18.19■□□□□ 0.5
LRP8-201ENST00000306052 CHMP4BQ9H444 224 aaKnown RBP18.19■□□□□ 0.5
LRP8-201ENST00000306052 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
LRP8-201ENST00000306052 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
LRP8-201ENST00000306052 GOLGA6L1Q8N7Z2 621 aa18.17■□□□□ 0.5
LRP8-201ENST00000306052 PSME1Q06323 249 aa18.17■□□□□ 0.5
LRP8-201ENST00000306052 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
LRP8-201ENST00000306052 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
LRP8-201ENST00000306052 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.5
LRP8-201ENST00000306052 PRKCSHP14314 528 aaPredicted RBP18.14■□□□□ 0.49
LRP8-201ENST00000306052 PDE4AP27815 886 aa18.14■□□□□ 0.49
LRP8-201ENST00000306052 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
LRP8-201ENST00000306052 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
LRP8-201ENST00000306052 CHMP3Q9Y3E7 222 aa18.12■□□□□ 0.49
LRP8-201ENST00000306052 CALD1Q05682 793 aaKnown RBP18.12■□□□□ 0.49
LRP8-201ENST00000306052 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
LRP8-201ENST00000306052 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
LRP8-201ENST00000306052 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
LRP8-201ENST00000306052 RASSF8Q8NHQ8 419 aa18.1■□□□□ 0.49
LRP8-201ENST00000306052 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
LRP8-201ENST00000306052 KIF21BO75037 1637 aa18.1■□□□□ 0.49
LRP8-201ENST00000306052 TPM4P67936 248 aa18.1■□□□□ 0.49
LRP8-201ENST00000306052 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
LRP8-201ENST00000306052 PKNOX2Q96KN3 472 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 FGD6Q6ZV73 1430 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
LRP8-201ENST00000306052 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
LRP8-201ENST00000306052 RWDD1Q9H446 243 aaPredicted RBP18.08■□□□□ 0.48
LRP8-201ENST00000306052 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
LRP8-201ENST00000306052 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
LRP8-201ENST00000306052 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
LRP8-201ENST00000306052 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
LRP8-201ENST00000306052 LRRC9Q6ZRR7 1453 aa18.07■□□□□ 0.48
LRP8-201ENST00000306052 COG3Q96JB2 828 aa18.06■□□□□ 0.48
LRP8-201ENST00000306052 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
LRP8-201ENST00000306052 FOXD4L5Q5VV16 416 aaPredicted RBP18.06■□□□□ 0.48
LRP8-201ENST00000306052 FOXD4L4Q8WXT5 416 aaPredicted RBP18.06■□□□□ 0.48
LRP8-201ENST00000306052 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
LRP8-201ENST00000306052 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
LRP8-201ENST00000306052 IQGAP2Q13576 1575 aa18.06■□□□□ 0.48
LRP8-201ENST00000306052 ITPRIPQ8IWB1 547 aa18.06■□□□□ 0.48
LRP8-201ENST00000306052 DDX11L8A8MPP1 907 aa18.06■□□□□ 0.48
LRP8-201ENST00000306052 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
LRP8-201ENST00000306052 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
LRP8-201ENST00000306052 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
LRP8-201ENST00000306052 ZNF771Q7L3S4 317 aaPredicted RBP18.05■□□□□ 0.48
LRP8-201ENST00000306052 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
LRP8-201ENST00000306052 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
LRP8-201ENST00000306052 CEP89Q96ST8 783 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms