RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
LRP8-201ENST00000306052 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
LRP8-201ENST00000306052 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
LRP8-201ENST00000306052 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
LRP8-201ENST00000306052 EHMT2Q96KQ7 1210 aa23.27■■□□□ 1.32
LRP8-201ENST00000306052 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
LRP8-201ENST00000306052 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
LRP8-201ENST00000306052 ERICH6Q7L0X2 663 aa22.65■■□□□ 1.22
LRP8-201ENST00000306052 MYT1Q01538 1121 aa22.53■■□□□ 1.2
LRP8-201ENST00000306052 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
LRP8-201ENST00000306052 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
LRP8-201ENST00000306052 ABCC9O60706 1549 aa22.47■■□□□ 1.19
LRP8-201ENST00000306052 CENPBP07199 599 aaPredicted RBP22.39■■□□□ 1.18
LRP8-201ENST00000306052 APLP2Q06481 763 aa22.39■■□□□ 1.17
LRP8-201ENST00000306052 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
LRP8-201ENST00000306052 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
LRP8-201ENST00000306052 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
LRP8-201ENST00000306052 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
LRP8-201ENST00000306052 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
LRP8-201ENST00000306052 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
LRP8-201ENST00000306052 YTHDC1Q96MU7 727 aaKnown RBP22.01■■□□□ 1.11
LRP8-201ENST00000306052 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
LRP8-201ENST00000306052 HRCP23327 699 aa21.75■■□□□ 1.07
LRP8-201ENST00000306052 NEFLP07196 543 aa21.71■■□□□ 1.07
LRP8-201ENST00000306052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
LRP8-201ENST00000306052 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
LRP8-201ENST00000306052 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
LRP8-201ENST00000306052 DAXXQ9UER7 740 aaPredicted RBP21.49■■□□□ 1.03
LRP8-201ENST00000306052 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
LRP8-201ENST00000306052 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
LRP8-201ENST00000306052 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
LRP8-201ENST00000306052 CNGB1Q14028 1251 aaPredicted RBP21.28■■□□□ 1
LRP8-201ENST00000306052 FBLN2P98095 1184 aa21.24■□□□□ 0.99
LRP8-201ENST00000306052 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
LRP8-201ENST00000306052 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
LRP8-201ENST00000306052 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
LRP8-201ENST00000306052 ITGAEP38570 1179 aa21.06■□□□□ 0.96
LRP8-201ENST00000306052 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
LRP8-201ENST00000306052 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
LRP8-201ENST00000306052 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
LRP8-201ENST00000306052 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
LRP8-201ENST00000306052 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
LRP8-201ENST00000306052 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
LRP8-201ENST00000306052 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.94
LRP8-201ENST00000306052 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.94
LRP8-201ENST00000306052 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
LRP8-201ENST00000306052 BCANQ96GW7 911 aa20.77■□□□□ 0.92
LRP8-201ENST00000306052 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
LRP8-201ENST00000306052 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
LRP8-201ENST00000306052 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
LRP8-201ENST00000306052 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
LRP8-201ENST00000306052 P3H3Q8IVL6 736 aa20.63■□□□□ 0.89
LRP8-201ENST00000306052 NACADO15069 1562 aa20.61■□□□□ 0.89
LRP8-201ENST00000306052 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
LRP8-201ENST00000306052 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
LRP8-201ENST00000306052 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
LRP8-201ENST00000306052 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
LRP8-201ENST00000306052 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
LRP8-201ENST00000306052 ZNF777Q9ULD5 760 aaPredicted RBP20.35■□□□□ 0.85
LRP8-201ENST00000306052 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
LRP8-201ENST00000306052 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
LRP8-201ENST00000306052 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
LRP8-201ENST00000306052 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
LRP8-201ENST00000306052 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
LRP8-201ENST00000306052 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
LRP8-201ENST00000306052 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
LRP8-201ENST00000306052 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
LRP8-201ENST00000306052 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
LRP8-201ENST00000306052 ANP32CO43423 234 aa20.16■□□□□ 0.82
LRP8-201ENST00000306052 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
LRP8-201ENST00000306052 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
LRP8-201ENST00000306052 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
LRP8-201ENST00000306052 FKBP8Q14318 412 aa20.08■□□□□ 0.8
LRP8-201ENST00000306052 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
LRP8-201ENST00000306052 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
LRP8-201ENST00000306052 NBR1Q14596 966 aa20.01■□□□□ 0.79
LRP8-201ENST00000306052 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
LRP8-201ENST00000306052 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
LRP8-201ENST00000306052 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
LRP8-201ENST00000306052 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
LRP8-201ENST00000306052 GLIPR1L2Q4G1C9 344 aa19.93■□□□□ 0.78
LRP8-201ENST00000306052 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
LRP8-201ENST00000306052 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
LRP8-201ENST00000306052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.775e-10■■■□□ 17.5
LRP8-201ENST00000306052 ANP32BQ92688 251 aaKnown RBP19.86■□□□□ 0.77
LRP8-201ENST00000306052 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
LRP8-201ENST00000306052 NEFMP07197 916 aa19.85■□□□□ 0.77
LRP8-201ENST00000306052 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
LRP8-201ENST00000306052 ARXQ96QS3 562 aa19.84■□□□□ 0.77
LRP8-201ENST00000306052 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
LRP8-201ENST00000306052 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
LRP8-201ENST00000306052 ANP32EQ9BTT0 268 aa19.77■□□□□ 0.76
LRP8-201ENST00000306052 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
LRP8-201ENST00000306052 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
LRP8-201ENST00000306052 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
LRP8-201ENST00000306052 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
LRP8-201ENST00000306052 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
LRP8-201ENST00000306052 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
LRP8-201ENST00000306052 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
LRP8-201ENST00000306052 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms