RNA–Protein interactions for RNA: ENST00000303436.10

ARF4-201, Transcript of ADP ribosylation factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF4, Length 1,660 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-201ENST00000303436 HRCP23327 699 aa19.78■□□□□ 0.76
ARF4-201ENST00000303436 MLECQ14165 292 aa19.78■□□□□ 0.76
ARF4-201ENST00000303436 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
ARF4-201ENST00000303436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
ARF4-201ENST00000303436 KANK1Q14678 1352 aa19.77■□□□□ 0.76
ARF4-201ENST00000303436 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
ARF4-201ENST00000303436 DEPDC5O75140 1603 aa19.74■□□□□ 0.75
ARF4-201ENST00000303436 NUP155O75694 1391 aa19.74■□□□□ 0.75
ARF4-201ENST00000303436 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
ARF4-201ENST00000303436 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
ARF4-201ENST00000303436 UNC13BO14795 1591 aa19.74■□□□□ 0.75
ARF4-201ENST00000303436 PRDM15P57071 1507 aaPredicted RBP19.72■□□□□ 0.75
ARF4-201ENST00000303436 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
ARF4-201ENST00000303436 MROH1Q8NDA8 1641 aa19.7■□□□□ 0.74
ARF4-201ENST00000303436 KDM5DQ9BY66 1539 aa19.68■□□□□ 0.74
ARF4-201ENST00000303436 FAM135AQ9P2D6 1515 aa19.68■□□□□ 0.74
ARF4-201ENST00000303436 IQGAP3Q86VI3 1631 aa19.67■□□□□ 0.74
ARF4-201ENST00000303436 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
ARF4-201ENST00000303436 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
ARF4-201ENST00000303436 ZC3H13Q5T200 1668 aaKnown RBP19.65■□□□□ 0.74
ARF4-201ENST00000303436 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
ARF4-201ENST00000303436 ABCC3O15438 1527 aa19.65■□□□□ 0.74
ARF4-201ENST00000303436 CEP152O94986 1710 aa19.64■□□□□ 0.73
ARF4-201ENST00000303436 FER1L4A9Z1Z3 1794 aa19.63■□□□□ 0.73
ARF4-201ENST00000303436 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
ARF4-201ENST00000303436 PZPP20742 1482 aa19.63■□□□□ 0.73
ARF4-201ENST00000303436 LMTK2Q8IWU2 1503 aa19.63■□□□□ 0.73
ARF4-201ENST00000303436 CLTCQ00610 1675 aaKnown RBP19.62■□□□□ 0.73
ARF4-201ENST00000303436 ADAMTSL3P82987 1691 aa19.61■□□□□ 0.73
ARF4-201ENST00000303436 TET3O43151 1660 aa19.61■□□□□ 0.73
ARF4-201ENST00000303436 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
ARF4-201ENST00000303436 PKD2Q13563 968 aa19.59■□□□□ 0.73
ARF4-201ENST00000303436 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
ARF4-201ENST00000303436 EFCAB6Q5THR3 1501 aa19.58■□□□□ 0.72
ARF4-201ENST00000303436 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
ARF4-201ENST00000303436 MROH2AA6NES4 1674 aa19.57■□□□□ 0.72
ARF4-201ENST00000303436 RIMS1Q86UR5 1692 aaKnown RBP19.57■□□□□ 0.72
ARF4-201ENST00000303436 ARHGAP31Q2M1Z3 1444 aa19.55■□□□□ 0.72
ARF4-201ENST00000303436 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
ARF4-201ENST00000303436 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
ARF4-201ENST00000303436 NPATQ14207 1427 aa19.53■□□□□ 0.72
ARF4-201ENST00000303436 E9PCH4 1651 aa19.53■□□□□ 0.72
ARF4-201ENST00000303436 FOXD1Q16676 465 aa19.52■□□□□ 0.71
ARF4-201ENST00000303436 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.71
ARF4-201ENST00000303436 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
ARF4-201ENST00000303436 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
ARF4-201ENST00000303436 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
ARF4-201ENST00000303436 C3P01024 1663 aa19.5■□□□□ 0.71
ARF4-201ENST00000303436 PTPRMP28827 1452 aa19.49■□□□□ 0.71
ARF4-201ENST00000303436 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
ARF4-201ENST00000303436 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
ARF4-201ENST00000303436 ERVK-7P63135 1459 aa19.46■□□□□ 0.71
ARF4-201ENST00000303436 PREX1Q8TCU6 1659 aa19.46■□□□□ 0.71
ARF4-201ENST00000303436 SPHKAPQ2M3C7 1700 aa19.45■□□□□ 0.7
ARF4-201ENST00000303436 PTPRTO14522 1441 aa19.44■□□□□ 0.7
ARF4-201ENST00000303436 NOS1P29475 1434 aa19.44■□□□□ 0.7
ARF4-201ENST00000303436 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
ARF4-201ENST00000303436 TNRQ92752 1358 aa19.43■□□□□ 0.7
ARF4-201ENST00000303436 ANKRD30BQ9BXX2 1392 aa19.42■□□□□ 0.7
ARF4-201ENST00000303436 TRPM2O94759 1503 aa19.42■□□□□ 0.7
ARF4-201ENST00000303436 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
ARF4-201ENST00000303436 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
ARF4-201ENST00000303436 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
ARF4-201ENST00000303436 CLSPNQ9HAW4 1339 aa19.4■□□□□ 0.7
ARF4-201ENST00000303436 SYNMO15061 1565 aa19.39■□□□□ 0.69
ARF4-201ENST00000303436 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
ARF4-201ENST00000303436 NLRP1Q9C000 1473 aa19.35■□□□□ 0.69
ARF4-201ENST00000303436 IDI1Q13907 227 aa19.35■□□□□ 0.69
ARF4-201ENST00000303436 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
ARF4-201ENST00000303436 UGGT1Q9NYU2 1555 aa19.35■□□□□ 0.69
ARF4-201ENST00000303436 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
ARF4-201ENST00000303436 CHGAP10645 457 aaKnown RBP19.33■□□□□ 0.69
ARF4-201ENST00000303436 NEUROD1Q13562 356 aa19.33■□□□□ 0.69
ARF4-201ENST00000303436 PIK3C2BO00750 1634 aa19.33■□□□□ 0.69
ARF4-201ENST00000303436 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.68
ARF4-201ENST00000303436 MYO3AQ8NEV4 1616 aa19.31■□□□□ 0.68
ARF4-201ENST00000303436 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
ARF4-201ENST00000303436 KIF1BO60333 1816 aa19.3■□□□□ 0.68
ARF4-201ENST00000303436 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
ARF4-201ENST00000303436 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.68
ARF4-201ENST00000303436 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.67
ARF4-201ENST00000303436 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
ARF4-201ENST00000303436 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
ARF4-201ENST00000303436 THEMISQ8N1K5 641 aaPredicted RBP19.25■□□□□ 0.67
ARF4-201ENST00000303436 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
ARF4-201ENST00000303436 TMEM131LA2VDJ0 1609 aa19.24■□□□□ 0.67
ARF4-201ENST00000303436 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
ARF4-201ENST00000303436 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
ARF4-201ENST00000303436 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
ARF4-201ENST00000303436 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
ARF4-201ENST00000303436 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
ARF4-201ENST00000303436 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
ARF4-201ENST00000303436 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
ARF4-201ENST00000303436 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
ARF4-201ENST00000303436 HDGFP51858 240 aaKnown RBP19.2■□□□□ 0.66
ARF4-201ENST00000303436 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
ARF4-201ENST00000303436 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
ARF4-201ENST00000303436 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
ARF4-201ENST00000303436 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
ARF4-201ENST00000303436 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms