RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RGS3P49796 1198 aa18.6■□□□□ 0.57
SDC2-201ENST00000302190 SYCP2Q9BX26 1530 aa18.6■□□□□ 0.57
SDC2-201ENST00000302190 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
SDC2-201ENST00000302190 KIF7Q2M1P5 1343 aa18.59■□□□□ 0.57
SDC2-201ENST00000302190 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
SDC2-201ENST00000302190 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
SDC2-201ENST00000302190 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
SDC2-201ENST00000302190 PLIN1O60240 522 aa18.57■□□□□ 0.56
SDC2-201ENST00000302190 TRAPPC8Q9Y2L5 1435 aa18.57■□□□□ 0.56
SDC2-201ENST00000302190 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
SDC2-201ENST00000302190 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
SDC2-201ENST00000302190 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
SDC2-201ENST00000302190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDC2-201ENST00000302190 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
SDC2-201ENST00000302190 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
SDC2-201ENST00000302190 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
SDC2-201ENST00000302190 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
SDC2-201ENST00000302190 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
SDC2-201ENST00000302190 ANKRD30AQ9BXX3 1397 aa18.53■□□□□ 0.56
SDC2-201ENST00000302190 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
SDC2-201ENST00000302190 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
SDC2-201ENST00000302190 DENND4BO75064 1496 aaPredicted RBP18.53■□□□□ 0.56
SDC2-201ENST00000302190 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
SDC2-201ENST00000302190 PLCH2O75038 1416 aa18.52■□□□□ 0.56
SDC2-201ENST00000302190 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.56
SDC2-201ENST00000302190 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
SDC2-201ENST00000302190 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.56
SDC2-201ENST00000302190 NEFMP07197 916 aa18.52■□□□□ 0.56
SDC2-201ENST00000302190 FANCAO15360 1455 aa18.52■□□□□ 0.55
SDC2-201ENST00000302190 RCAN3Q9UKA8 241 aa18.51■□□□□ 0.55
SDC2-201ENST00000302190 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
SDC2-201ENST00000302190 DNMT1P26358 1616 aaKnown RBP18.5■□□□□ 0.55
SDC2-201ENST00000302190 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
SDC2-201ENST00000302190 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
SDC2-201ENST00000302190 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
SDC2-201ENST00000302190 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
SDC2-201ENST00000302190 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
SDC2-201ENST00000302190 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
SDC2-201ENST00000302190 TSPOAP1O95153 1857 aa18.49■□□□□ 0.55
SDC2-201ENST00000302190 USP47Q96K76 1375 aa18.48■□□□□ 0.55
SDC2-201ENST00000302190 GGT6Q6P531 493 aa18.48■□□□□ 0.55
SDC2-201ENST00000302190 ROCK2O75116 1388 aaKnown RBP18.48■□□□□ 0.55
SDC2-201ENST00000302190 MYO5CQ9NQX4 1742 aa18.48■□□□□ 0.55
SDC2-201ENST00000302190 KIF3BO15066 747 aa18.47■□□□□ 0.55
SDC2-201ENST00000302190 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
SDC2-201ENST00000302190 PREX2Q70Z35 1606 aa18.47■□□□□ 0.55
SDC2-201ENST00000302190 MLECQ14165 292 aa18.46■□□□□ 0.55
SDC2-201ENST00000302190 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
SDC2-201ENST00000302190 ADGRL1O94910 1474 aa18.45■□□□□ 0.54
SDC2-201ENST00000302190 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
SDC2-201ENST00000302190 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
SDC2-201ENST00000302190 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
SDC2-201ENST00000302190 PLEKHH2Q8IVE3 1493 aa18.43■□□□□ 0.54
SDC2-201ENST00000302190 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
SDC2-201ENST00000302190 CNTLNQ9NXG0 1405 aa18.42■□□□□ 0.54
SDC2-201ENST00000302190 PAK3O75914 559 aaPredicted RBP18.41■□□□□ 0.54
SDC2-201ENST00000302190 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
SDC2-201ENST00000302190 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
SDC2-201ENST00000302190 TMF1P82094 1093 aa18.39■□□□□ 0.53
SDC2-201ENST00000302190 PANK3Q9H999 370 aa18.38■□□□□ 0.53
SDC2-201ENST00000302190 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
SDC2-201ENST00000302190 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
SDC2-201ENST00000302190 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
SDC2-201ENST00000302190 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
SDC2-201ENST00000302190 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
SDC2-201ENST00000302190 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
SDC2-201ENST00000302190 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
SDC2-201ENST00000302190 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
SDC2-201ENST00000302190 UBE2Q2Q8WVN8 375 aa18.33■□□□□ 0.53
SDC2-201ENST00000302190 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
SDC2-201ENST00000302190 RALBP1Q15311 655 aa18.33■□□□□ 0.52
SDC2-201ENST00000302190 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
SDC2-201ENST00000302190 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
SDC2-201ENST00000302190 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
SDC2-201ENST00000302190 GCC2Q8IWJ2 1684 aa18.32■□□□□ 0.52
SDC2-201ENST00000302190 ABCC1P33527 1531 aa18.32■□□□□ 0.52
SDC2-201ENST00000302190 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
SDC2-201ENST00000302190 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
SDC2-201ENST00000302190 PZPP20742 1482 aa18.31■□□□□ 0.52
SDC2-201ENST00000302190 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
SDC2-201ENST00000302190 ABCA9Q8IUA7 1624 aa18.3■□□□□ 0.52
SDC2-201ENST00000302190 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
SDC2-201ENST00000302190 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
SDC2-201ENST00000302190 CROCC2H7BZ55 1655 aa18.29■□□□□ 0.52
SDC2-201ENST00000302190 PDE4AP27815 886 aa18.29■□□□□ 0.52
SDC2-201ENST00000302190 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
SDC2-201ENST00000302190 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
SDC2-201ENST00000302190 UPF2Q9HAU5 1272 aaKnown RBP18.28■□□□□ 0.52
SDC2-201ENST00000302190 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
SDC2-201ENST00000302190 ADGBQ8N7X0 1667 aa18.26■□□□□ 0.51
SDC2-201ENST00000302190 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
SDC2-201ENST00000302190 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
SDC2-201ENST00000302190 RRP7AQ9Y3A4 280 aaKnown RBP18.26■□□□□ 0.51
SDC2-201ENST00000302190 CLUAP1Q96AJ1 413 aa18.25■□□□□ 0.51
SDC2-201ENST00000302190 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
SDC2-201ENST00000302190 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
SDC2-201ENST00000302190 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
SDC2-201ENST00000302190 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
SDC2-201ENST00000302190 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
SDC2-201ENST00000302190 DDRGK1Q96HY6 314 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms