RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
CHRNA5-201ENST00000299565 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
CHRNA5-201ENST00000299565 BRD4O60885 1362 aaPredicted RBP22.64■■□□□ 1.22
CHRNA5-201ENST00000299565 APAF1O14727 1248 aa22.64■■□□□ 1.22
CHRNA5-201ENST00000299565 PDE3BQ13370 1112 aa22.64■■□□□ 1.21
CHRNA5-201ENST00000299565 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
CHRNA5-201ENST00000299565 DDRGK1Q96HY6 314 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 PPM1GO15355 546 aaPredicted RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 PTPRGP23470 1445 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 BCL2L13Q9BXK5 485 aa22.62■■□□□ 1.21
CHRNA5-201ENST00000299565 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 CLUAP1Q96AJ1 413 aa22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 SPRYD3Q8NCJ5 442 aa22.61■■□□□ 1.21
CHRNA5-201ENST00000299565 KIAA0586Q9BVV6 1533 aa22.6■■□□□ 1.21
CHRNA5-201ENST00000299565 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
CHRNA5-201ENST00000299565 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
CHRNA5-201ENST00000299565 KIF3BO15066 747 aa22.58■■□□□ 1.2
CHRNA5-201ENST00000299565 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CHRNA5-201ENST00000299565 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 BACH2Q9BYV9 841 aa22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 SLKQ9H2G2 1235 aaPredicted RBP22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.56■■□□□ 1.2
CHRNA5-201ENST00000299565 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
CHRNA5-201ENST00000299565 PZPP20742 1482 aa22.54■■□□□ 1.2
CHRNA5-201ENST00000299565 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
CHRNA5-201ENST00000299565 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
CHRNA5-201ENST00000299565 TRAK1Q9UPV9 953 aa22.51■■□□□ 1.19
CHRNA5-201ENST00000299565 BCAR3O75815 825 aa22.51■■□□□ 1.19
CHRNA5-201ENST00000299565 WDR62O43379 1518 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 GGT6Q6P531 493 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
CHRNA5-201ENST00000299565 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
CHRNA5-201ENST00000299565 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
CHRNA5-201ENST00000299565 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 U2SURPO15042 1029 aaKnown RBP22.48■■□□□ 1.19
CHRNA5-201ENST00000299565 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
CHRNA5-201ENST00000299565 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
CHRNA5-201ENST00000299565 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
CHRNA5-201ENST00000299565 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
CHRNA5-201ENST00000299565 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
CHRNA5-201ENST00000299565 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
CHRNA5-201ENST00000299565 MS4A1P11836 297 aa22.44■■□□□ 1.18
CHRNA5-201ENST00000299565 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 STK26Q9P289 416 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
CHRNA5-201ENST00000299565 CENPQQ7L2Z9 268 aaPredicted RBP22.42■■□□□ 1.18
CHRNA5-201ENST00000299565 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
CHRNA5-201ENST00000299565 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
CHRNA5-201ENST00000299565 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 U2AF1L5P0DN76 240 aaPredicted RBP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 U2AF1Q01081 240 aaKnown RBP eCLIP22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 NFKBIBQ15653 356 aa22.4■■□□□ 1.18
CHRNA5-201ENST00000299565 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
CHRNA5-201ENST00000299565 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 TESK2Q96S53 571 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
CHRNA5-201ENST00000299565 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
CHRNA5-201ENST00000299565 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
CHRNA5-201ENST00000299565 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 ARHGAP5Q13017 1502 aa22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 GZF1Q9H116 711 aaPredicted RBP22.35■■□□□ 1.17
CHRNA5-201ENST00000299565 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
CHRNA5-201ENST00000299565 BECN1Q14457 450 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
CHRNA5-201ENST00000299565 ATP10BO94823 1461 aa22.33■■□□□ 1.16
CHRNA5-201ENST00000299565 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
CHRNA5-201ENST00000299565 GSE1Q14687 1217 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 KIF14Q15058 1648 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 DUSP27Q5VZP5 1158 aa22.32■■□□□ 1.16
CHRNA5-201ENST00000299565 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
CHRNA5-201ENST00000299565 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
CHRNA5-201ENST00000299565 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
CHRNA5-201ENST00000299565 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 PARD3Q8TEW0 1356 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 E9PSI1 815 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 KANK1Q14678 1352 aa22.28■■□□□ 1.16
CHRNA5-201ENST00000299565 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
CHRNA5-201ENST00000299565 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms