RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 EIF2AK4Q9P2K8 1649 aaKnown RBP35.84■■■■□ 3.33
GBX1-201ENST00000297537 ZMYM3Q14202 1370 aa35.84■■■■□ 3.33
GBX1-201ENST00000297537 ERBINQ96RT1 1412 aa35.83■■■■□ 3.33
GBX1-201ENST00000297537 MROH2AA6NES4 1674 aa35.81■■■■□ 3.32
GBX1-201ENST00000297537 C3P01024 1663 aa35.81■■■■□ 3.32
GBX1-201ENST00000297537 RNF17Q9BXT8 1623 aaKnown RBP35.79■■■■□ 3.32
GBX1-201ENST00000297537 CLTCQ00610 1675 aaKnown RBP35.78■■■■□ 3.32
GBX1-201ENST00000297537 FAM135AQ9P2D6 1515 aa35.78■■■■□ 3.32
GBX1-201ENST00000297537 ROCK1Q13464 1354 aa35.76■■■■□ 3.31
GBX1-201ENST00000297537 WASHC2CQ9Y4E1 1318 aa35.74■■■■□ 3.31
GBX1-201ENST00000297537 LMTK3Q96Q04 1460 aa35.73■■■■□ 3.31
GBX1-201ENST00000297537 KDM5DQ9BY66 1539 aa35.73■■■■□ 3.31
GBX1-201ENST00000297537 MROH1Q8NDA8 1641 aa35.72■■■■□ 3.31
GBX1-201ENST00000297537 ITGAEP38570 1179 aa35.7■■■■□ 3.31
GBX1-201ENST00000297537 SETD1BQ9UPS6 1966 aaKnown RBP35.7■■■■□ 3.31
GBX1-201ENST00000297537 NPATQ14207 1427 aa35.68■■■■□ 3.3
GBX1-201ENST00000297537 ANKRD50Q9ULJ7 1429 aa35.66■■■■□ 3.3
GBX1-201ENST00000297537 ABCC3O15438 1527 aa35.64■■■■□ 3.3
GBX1-201ENST00000297537 PRDM15P57071 1507 aaPredicted RBP35.64■■■■□ 3.3
GBX1-201ENST00000297537 DEPDC5O75140 1603 aa35.64■■■■□ 3.3
GBX1-201ENST00000297537 PREX1Q8TCU6 1659 aa35.61■■■■□ 3.29
GBX1-201ENST00000297537 ZC3H13Q5T200 1668 aaKnown RBP35.59■■■■□ 3.29
GBX1-201ENST00000297537 PZPP20742 1482 aa35.59■■■■□ 3.29
GBX1-201ENST00000297537 UHRF1BP1Q6BDS2 1440 aa35.57■■■■□ 3.29
GBX1-201ENST00000297537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.56■■■■□ 3.28
GBX1-201ENST00000297537 FBXO31Q5XUX0 539 aaPredicted RBP35.55■■■■□ 3.28
GBX1-201ENST00000297537 VWDEQ8N2E2 1590 aa35.54■■■■□ 3.28
GBX1-201ENST00000297537 HSPA2P54652 639 aa35.53■■■■□ 3.28
GBX1-201ENST00000297537 KANK1Q14678 1352 aa35.52■■■■□ 3.28
GBX1-201ENST00000297537 CEP152O94986 1710 aa35.5■■■■□ 3.27
GBX1-201ENST00000297537 ARHGAP31Q2M1Z3 1444 aa35.49■■■■□ 3.27
GBX1-201ENST00000297537 LMTK2Q8IWU2 1503 aa35.48■■■■□ 3.27
GBX1-201ENST00000297537 CAMSAP1Q5T5Y3 1602 aa35.46■■■■□ 3.27
GBX1-201ENST00000297537 TNRQ92752 1358 aa35.44■■■■□ 3.26
GBX1-201ENST00000297537 NAIPQ13075 1403 aa35.43■■■■□ 3.26
GBX1-201ENST00000297537 UNC13BO14795 1591 aa35.41■■■■□ 3.26
GBX1-201ENST00000297537 MYO3AQ8NEV4 1616 aa35.4■■■■□ 3.26
GBX1-201ENST00000297537 SPATA31D1Q6ZQQ2 1576 aa35.4■■■■□ 3.26
GBX1-201ENST00000297537 ERVK-7P63135 1459 aa35.38■■■■□ 3.25
GBX1-201ENST00000297537 HFM1A2PYH4 1435 aa35.38■■■■□ 3.25
GBX1-201ENST00000297537 ZNF142P52746 1687 aaPredicted RBP35.35■■■■□ 3.25
GBX1-201ENST00000297537 A2ML1A8K2U0 1454 aa35.35■■■■□ 3.25
GBX1-201ENST00000297537 CEP170BQ9Y4F5 1589 aaPredicted RBP35.34■■■■□ 3.25
GBX1-201ENST00000297537 EFCAB6Q5THR3 1501 aa35.32■■■■□ 3.25
GBX1-201ENST00000297537 NLRP1Q9C000 1473 aa35.32■■■■□ 3.24
GBX1-201ENST00000297537 GCC2Q8IWJ2 1684 aa35.31■■■■□ 3.24
GBX1-201ENST00000297537 NUP155O75694 1391 aa35.3■■■■□ 3.24
GBX1-201ENST00000297537 CFAP65Q6ZU64 1925 aaKnown RBP35.28■■■■□ 3.24
GBX1-201ENST00000297537 IQGAP3Q86VI3 1631 aa35.27■■■■□ 3.24
GBX1-201ENST00000297537 TET3O43151 1660 aa35.26■■■■□ 3.23
GBX1-201ENST00000297537 RPRD2Q5VT52 1461 aaKnown RBP35.25■■■■□ 3.23
GBX1-201ENST00000297537 STRCQ7RTU9 1775 aa35.25■■■■□ 3.23
GBX1-201ENST00000297537 NOS1P29475 1434 aa35.23■■■■□ 3.23
GBX1-201ENST00000297537 PLA2R1Q13018 1463 aa35.21■■■■□ 3.23
GBX1-201ENST00000297537 UGGT1Q9NYU2 1555 aa35.18■■■■□ 3.22
GBX1-201ENST00000297537 THEMISQ8N1K5 641 aaPredicted RBP35.17■■■■□ 3.22
GBX1-201ENST00000297537 DMRT2Q9Y5R5 561 aa35.15■■■■□ 3.22
GBX1-201ENST00000297537 SYNMO15061 1565 aa35.15■■■■□ 3.22
GBX1-201ENST00000297537 E9PCH4 1651 aa35.14■■■■□ 3.22
GBX1-201ENST00000297537 IDI1Q13907 227 aa35.13■■■■□ 3.21
GBX1-201ENST00000297537 PKD2Q13563 968 aa35.12■■■■□ 3.21
GBX1-201ENST00000297537 NCKAP5LQ9HCH0 1330 aa35.11■■■■□ 3.21
GBX1-201ENST00000297537 SLC52A1Q9NWF4 448 aa35.11■■■■□ 3.21
GBX1-201ENST00000297537 PTPRTO14522 1441 aa35.1■■■■□ 3.21
GBX1-201ENST00000297537 TRIM52Q96A61 297 aa35.06■■■■□ 3.2
GBX1-201ENST00000297537 UBR1Q8IWV7 1749 aa35.06■■■■□ 3.2
GBX1-201ENST00000297537 SETD5Q9C0A6 1442 aa35.05■■■■□ 3.2
GBX1-201ENST00000297537 PIK3C2BO00750 1634 aa35.04■■■■□ 3.2
GBX1-201ENST00000297537 ANKLE2Q86XL3 938 aa35.02■■■■□ 3.2
GBX1-201ENST00000297537 KDM5AP29375 1690 aaKnown RBP34.99■■■■□ 3.19
GBX1-201ENST00000297537 ARHGAP23Q9P227 1491 aa34.97■■■■□ 3.19
GBX1-201ENST00000297537 ACIN1Q9UKV3 1341 aaKnown RBP34.97■■■■□ 3.19
GBX1-201ENST00000297537 SLIT1O75093 1534 aa34.96■■■■□ 3.19
GBX1-201ENST00000297537 SLC4A1APQ9BWU0 796 aaKnown RBP34.96■■■■□ 3.19
GBX1-201ENST00000297537 STAG3Q9UJ98 1225 aa34.96■■■■□ 3.19
GBX1-201ENST00000297537 NEURL4Q96JN8 1562 aa34.95■■■■□ 3.18
GBX1-201ENST00000297537 MED14O60244 1454 aa34.94■■■■□ 3.18
GBX1-201ENST00000297537 RAB3GAP2Q9H2M9 1393 aa34.93■■■■□ 3.18
GBX1-201ENST00000297537 TMEM2Q9UHN6 1383 aa34.93■■■■□ 3.18
GBX1-201ENST00000297537 POLR1AO95602 1720 aaPredicted RBP34.92■■■■□ 3.18
GBX1-201ENST00000297537 ADGRB3O60242 1522 aa34.92■■■■□ 3.18
GBX1-201ENST00000297537 LTKP29376 864 aa34.91■■■■□ 3.18
GBX1-201ENST00000297537 MPHOSPH9Q99550 1183 aa34.88■■■■□ 3.17
GBX1-201ENST00000297537 SPHKAPQ2M3C7 1700 aa34.88■■■■□ 3.17
GBX1-201ENST00000297537 TXNDC2Q86VQ3 553 aa34.87■■■■□ 3.17
GBX1-201ENST00000297537 TMEM131LA2VDJ0 1609 aa34.86■■■■□ 3.17
GBX1-201ENST00000297537 HRCP23327 699 aa34.86■■■■□ 3.17
GBX1-201ENST00000297537 NPHP4O75161 1426 aaPredicted RBP34.86■■■■□ 3.17
GBX1-201ENST00000297537 SCAF11Q99590 1463 aaKnown RBP34.85■■■■□ 3.17
GBX1-201ENST00000297537 EID1Q9Y6B2 187 aa34.83■■■■□ 3.17
GBX1-201ENST00000297537 TRPM2O94759 1503 aa34.82■■■■□ 3.16
GBX1-201ENST00000297537 CHGAP10645 457 aaKnown RBP34.78■■■■□ 3.16
GBX1-201ENST00000297537 FOXD1Q16676 465 aa34.78■■■■□ 3.16
GBX1-201ENST00000297537 ZFYVE9O95405 1425 aa34.78■■■■□ 3.16
GBX1-201ENST00000297537 MYO5BQ9ULV0 1848 aa34.77■■■■□ 3.16
GBX1-201ENST00000297537 IQGAP1P46940 1657 aa34.76■■■■□ 3.16
GBX1-201ENST00000297537 LTBP4Q8N2S1 1624 aa34.76■■■■□ 3.15
GBX1-201ENST00000297537 ZNF335Q9H4Z2 1342 aaPredicted RBP34.75■■■■□ 3.15
GBX1-201ENST00000297537 CLTCL1P53675 1640 aa34.74■■■■□ 3.15
GBX1-201ENST00000297537 RIMS2Q9UQ26 1411 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms