RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 E9PCH4 1651 aa19.92■□□□□ 0.78
CCT3-201ENST00000295688 RSPH4AQ5TD94 716 aa19.92■□□□□ 0.78
CCT3-201ENST00000295688 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
CCT3-201ENST00000295688 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
CCT3-201ENST00000295688 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
CCT3-201ENST00000295688 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
CCT3-201ENST00000295688 FBLN2P98095 1184 aa19.88■□□□□ 0.77
CCT3-201ENST00000295688 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
CCT3-201ENST00000295688 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
CCT3-201ENST00000295688 CCDC141Q6ZP82 1450 aa19.86■□□□□ 0.77
CCT3-201ENST00000295688 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
CCT3-201ENST00000295688 FAM135AQ9P2D6 1515 aa19.84■□□□□ 0.77
CCT3-201ENST00000295688 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
CCT3-201ENST00000295688 NLRP13Q86W25 1043 aa19.84■□□□□ 0.77
CCT3-201ENST00000295688 ANP32AP39687 249 aaKnown RBP19.83■□□□□ 0.77
CCT3-201ENST00000295688 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.77
CCT3-201ENST00000295688 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.76
CCT3-201ENST00000295688 LAMC1P11047 1609 aa19.82■□□□□ 0.76
CCT3-201ENST00000295688 CCDC144AA2RUR9 1427 aa19.82■□□□□ 0.76
CCT3-201ENST00000295688 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
CCT3-201ENST00000295688 PREX2Q70Z35 1606 aa19.81■□□□□ 0.76
CCT3-201ENST00000295688 INSRP06213 1382 aa19.81■□□□□ 0.76
CCT3-201ENST00000295688 PARD3Q8TEW0 1356 aa19.81■□□□□ 0.76
CCT3-201ENST00000295688 SAMD9LQ8IVG5 1584 aa19.8■□□□□ 0.76
CCT3-201ENST00000295688 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
CCT3-201ENST00000295688 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
CCT3-201ENST00000295688 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
CCT3-201ENST00000295688 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
CCT3-201ENST00000295688 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
CCT3-201ENST00000295688 UNC13BO14795 1591 aa19.78■□□□□ 0.76
CCT3-201ENST00000295688 IPO9Q96P70 1041 aaKnown RBP19.78■□□□□ 0.76
CCT3-201ENST00000295688 RCAN3Q9UKA8 241 aa19.77■□□□□ 0.75
CCT3-201ENST00000295688 DEKP35659 375 aaKnown RBP19.76■□□□□ 0.75
CCT3-201ENST00000295688 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
CCT3-201ENST00000295688 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
CCT3-201ENST00000295688 PRDM15P57071 1507 aaPredicted RBP19.73■□□□□ 0.75
CCT3-201ENST00000295688 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
CCT3-201ENST00000295688 PER1O15534 1290 aaPredicted RBP19.73■□□□□ 0.75
CCT3-201ENST00000295688 ZBTB47Q9UFB7 747 aaPredicted RBP19.72■□□□□ 0.75
CCT3-201ENST00000295688 IQGAP3Q86VI3 1631 aa19.71■□□□□ 0.75
CCT3-201ENST00000295688 PLEKHH2Q8IVE3 1493 aa19.71■□□□□ 0.75
CCT3-201ENST00000295688 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
CCT3-201ENST00000295688 A2MP01023 1474 aa19.7■□□□□ 0.74
CCT3-201ENST00000295688 PAK3O75914 559 aaPredicted RBP19.7■□□□□ 0.74
CCT3-201ENST00000295688 ATP10AO60312 1499 aa19.69■□□□□ 0.74
CCT3-201ENST00000295688 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
CCT3-201ENST00000295688 MS4A1P11836 297 aa19.68■□□□□ 0.74
CCT3-201ENST00000295688 EXOC6Q8TAG9 804 aa19.68■□□□□ 0.74
CCT3-201ENST00000295688 SYCP2Q9BX26 1530 aa19.68■□□□□ 0.74
CCT3-201ENST00000295688 MYO5CQ9NQX4 1742 aa19.68■□□□□ 0.74
CCT3-201ENST00000295688 BLMP54132 1417 aaPredicted RBP19.67■□□□□ 0.74
CCT3-201ENST00000295688 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
CCT3-201ENST00000295688 TMF1P82094 1093 aa19.67■□□□□ 0.74
CCT3-201ENST00000295688 NBPF1Q3BBV0 1214 aa19.67■□□□□ 0.74
CCT3-201ENST00000295688 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
CCT3-201ENST00000295688 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
CCT3-201ENST00000295688 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
CCT3-201ENST00000295688 TESK2Q96S53 571 aa19.65■□□□□ 0.74
CCT3-201ENST00000295688 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
CCT3-201ENST00000295688 MAGI2Q86UL8 1455 aa19.62■□□□□ 0.73
CCT3-201ENST00000295688 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
CCT3-201ENST00000295688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.731e-8■■□□□ 13.3
CCT3-201ENST00000295688 PANK3Q9H999 370 aa19.61■□□□□ 0.73
CCT3-201ENST00000295688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCT3-201ENST00000295688 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
CCT3-201ENST00000295688 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
CCT3-201ENST00000295688 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
CCT3-201ENST00000295688 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
CCT3-201ENST00000295688 NBR1Q14596 966 aa19.59■□□□□ 0.73
CCT3-201ENST00000295688 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
CCT3-201ENST00000295688 PDE4AP27815 886 aa19.59■□□□□ 0.73
CCT3-201ENST00000295688 STAC3Q96MF2 364 aa19.58■□□□□ 0.72
CCT3-201ENST00000295688 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
CCT3-201ENST00000295688 BACH2Q9BYV9 841 aa19.57■□□□□ 0.72
CCT3-201ENST00000295688 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
CCT3-201ENST00000295688 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
CCT3-201ENST00000295688 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
CCT3-201ENST00000295688 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
CCT3-201ENST00000295688 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
CCT3-201ENST00000295688 PLCH2O75038 1416 aa19.5■□□□□ 0.71
CCT3-201ENST00000295688 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
CCT3-201ENST00000295688 CHD1O14646 1710 aa19.49■□□□□ 0.71
CCT3-201ENST00000295688 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
CCT3-201ENST00000295688 USP35Q9P2H5 1018 aa19.49■□□□□ 0.71
CCT3-201ENST00000295688 WDR7Q9Y4E6 1490 aa19.49■□□□□ 0.71
CCT3-201ENST00000295688 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCT3-201ENST00000295688 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
CCT3-201ENST00000295688 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
CCT3-201ENST00000295688 MADDQ8WXG6 1647 aa19.48■□□□□ 0.71
CCT3-201ENST00000295688 SYNMO15061 1565 aa19.48■□□□□ 0.71
CCT3-201ENST00000295688 SCAPERQ9BY12 1400 aa19.47■□□□□ 0.71
CCT3-201ENST00000295688 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
CCT3-201ENST00000295688 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
CCT3-201ENST00000295688 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
CCT3-201ENST00000295688 SPHKAPQ2M3C7 1700 aa19.46■□□□□ 0.71
CCT3-201ENST00000295688 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
CCT3-201ENST00000295688 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
CCT3-201ENST00000295688 PLIN1O60240 522 aa19.46■□□□□ 0.71
CCT3-201ENST00000295688 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
CCT3-201ENST00000295688 NPC1L1Q9UHC9 1359 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms