RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
KCNIP3-201ENST00000295225 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
KCNIP3-201ENST00000295225 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
KCNIP3-201ENST00000295225 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
KCNIP3-201ENST00000295225 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
KCNIP3-201ENST00000295225 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
KCNIP3-201ENST00000295225 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
KCNIP3-201ENST00000295225 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
KCNIP3-201ENST00000295225 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
KCNIP3-201ENST00000295225 PLIN1O60240 522 aa17.81■□□□□ 0.44
KCNIP3-201ENST00000295225 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
KCNIP3-201ENST00000295225 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
KCNIP3-201ENST00000295225 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
KCNIP3-201ENST00000295225 CHMP4AQ9BY43 222 aa17.78■□□□□ 0.44
KCNIP3-201ENST00000295225 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
KCNIP3-201ENST00000295225 ATP10BO94823 1461 aa17.77■□□□□ 0.44
KCNIP3-201ENST00000295225 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
KCNIP3-201ENST00000295225 C14orf37Q86TY3 774 aa17.77■□□□□ 0.43
KCNIP3-201ENST00000295225 NUP160Q12769 1436 aa17.77■□□□□ 0.43
KCNIP3-201ENST00000295225 KIF15Q9NS87 1388 aa17.76■□□□□ 0.43
KCNIP3-201ENST00000295225 PTPRGP23470 1445 aa17.75■□□□□ 0.43
KCNIP3-201ENST00000295225 MBD5Q9P267 1494 aa17.73■□□□□ 0.43
KCNIP3-201ENST00000295225 AAMPQ13685 434 aa17.72■□□□□ 0.43
KCNIP3-201ENST00000295225 BRD2P25440 801 aaKnown RBP17.71■□□□□ 0.43
KCNIP3-201ENST00000295225 SMG6Q86US8 1419 aaKnown RBP17.71■□□□□ 0.43
KCNIP3-201ENST00000295225 KDM5CP41229 1560 aa17.71■□□□□ 0.43
KCNIP3-201ENST00000295225 A0A0U1RQG5 324 aaPredicted RBP17.71■□□□□ 0.43
KCNIP3-201ENST00000295225 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
KCNIP3-201ENST00000295225 ITSN2Q9NZM3 1697 aa17.68■□□□□ 0.42
KCNIP3-201ENST00000295225 PANK3Q9H999 370 aa17.68■□□□□ 0.42
KCNIP3-201ENST00000295225 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
KCNIP3-201ENST00000295225 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
KCNIP3-201ENST00000295225 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
KCNIP3-201ENST00000295225 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
KCNIP3-201ENST00000295225 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
KCNIP3-201ENST00000295225 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
KCNIP3-201ENST00000295225 ABCA8O94911 1581 aa17.65■□□□□ 0.42
KCNIP3-201ENST00000295225 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
KCNIP3-201ENST00000295225 RRP1P56182 461 aaKnown RBP17.64■□□□□ 0.41
KCNIP3-201ENST00000295225 GLIPR1L2Q4G1C9 344 aa17.64■□□□□ 0.41
KCNIP3-201ENST00000295225 ABCC10Q5T3U5 1492 aa17.63■□□□□ 0.41
KCNIP3-201ENST00000295225 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
KCNIP3-201ENST00000295225 DEKP35659 375 aaKnown RBP17.62■□□□□ 0.41
KCNIP3-201ENST00000295225 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
KCNIP3-201ENST00000295225 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
KCNIP3-201ENST00000295225 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
KCNIP3-201ENST00000295225 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
KCNIP3-201ENST00000295225 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
KCNIP3-201ENST00000295225 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
KCNIP3-201ENST00000295225 POLR1AO95602 1720 aaPredicted RBP17.6■□□□□ 0.41
KCNIP3-201ENST00000295225 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
KCNIP3-201ENST00000295225 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
KCNIP3-201ENST00000295225 ERCC6L2Q5T890 1561 aa17.59■□□□□ 0.41
KCNIP3-201ENST00000295225 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
KCNIP3-201ENST00000295225 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
KCNIP3-201ENST00000295225 CROCC2H7BZ55 1655 aa17.59■□□□□ 0.41
KCNIP3-201ENST00000295225 NLRP13Q86W25 1043 aa17.58■□□□□ 0.41
KCNIP3-201ENST00000295225 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
KCNIP3-201ENST00000295225 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
KCNIP3-201ENST00000295225 RALBP1Q15311 655 aa17.58■□□□□ 0.4
KCNIP3-201ENST00000295225 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
KCNIP3-201ENST00000295225 TESK2Q96S53 571 aa17.57■□□□□ 0.4
KCNIP3-201ENST00000295225 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
KCNIP3-201ENST00000295225 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
KCNIP3-201ENST00000295225 UHRF1BP1Q6BDS2 1440 aa17.56■□□□□ 0.4
KCNIP3-201ENST00000295225 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
KCNIP3-201ENST00000295225 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
KCNIP3-201ENST00000295225 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
KCNIP3-201ENST00000295225 FAM135AQ9P2D6 1515 aa17.56■□□□□ 0.4
KCNIP3-201ENST00000295225 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
KCNIP3-201ENST00000295225 KCNA4P22459 653 aa17.55■□□□□ 0.4
KCNIP3-201ENST00000295225 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
KCNIP3-201ENST00000295225 CHD1O14646 1710 aa17.55■□□□□ 0.4
KCNIP3-201ENST00000295225 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 PLA2R1Q13018 1463 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
KCNIP3-201ENST00000295225 SLC4A3P48751 1232 aa17.53■□□□□ 0.4
KCNIP3-201ENST00000295225 IPO9Q96P70 1041 aaKnown RBP17.53■□□□□ 0.4
KCNIP3-201ENST00000295225 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
KCNIP3-201ENST00000295225 SAMD9LQ8IVG5 1584 aa17.52■□□□□ 0.4
KCNIP3-201ENST00000295225 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
KCNIP3-201ENST00000295225 A2MP01023 1474 aa17.51■□□□□ 0.39
KCNIP3-201ENST00000295225 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
KCNIP3-201ENST00000295225 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
KCNIP3-201ENST00000295225 PDE4AP27815 886 aa17.5■□□□□ 0.39
KCNIP3-201ENST00000295225 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
KCNIP3-201ENST00000295225 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
KCNIP3-201ENST00000295225 KDM5DQ9BY66 1539 aa17.48■□□□□ 0.39
KCNIP3-201ENST00000295225 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
KCNIP3-201ENST00000295225 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
KCNIP3-201ENST00000295225 TMF1P82094 1093 aa17.48■□□□□ 0.39
KCNIP3-201ENST00000295225 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
KCNIP3-201ENST00000295225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.45■□□□□ 0.38
KCNIP3-201ENST00000295225 ERBINQ96RT1 1412 aa17.44■□□□□ 0.38
KCNIP3-201ENST00000295225 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 638.5 ms