RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 RALBP1Q15311 655 aa25.8■■□□□ 1.72
LSM12-201ENST00000293406 ABCA8O94911 1581 aa25.79■■□□□ 1.72
LSM12-201ENST00000293406 ATP10BO94823 1461 aa25.79■■□□□ 1.72
LSM12-201ENST00000293406 MYT1LQ9UL68 1186 aa25.79■■□□□ 1.72
LSM12-201ENST00000293406 PTPRGP23470 1445 aa25.78■■□□□ 1.72
LSM12-201ENST00000293406 NOP58Q9Y2X3 529 aaKnown RBP25.77■■□□□ 1.72
LSM12-201ENST00000293406 HNRNPMP52272 730 aaKnown RBP eCLIP25.75■■□□□ 1.71
LSM12-201ENST00000293406 E9PCH4 1651 aa25.73■■□□□ 1.71
LSM12-201ENST00000293406 ARHGEF5Q12774 1597 aa25.73■■□□□ 1.71
LSM12-201ENST00000293406 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
LSM12-201ENST00000293406 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
LSM12-201ENST00000293406 FAM135AQ9P2D6 1515 aa25.68■■□□□ 1.7
LSM12-201ENST00000293406 RRP1P56182 461 aaKnown RBP25.66■■□□□ 1.7
LSM12-201ENST00000293406 NLRP13Q86W25 1043 aa25.66■■□□□ 1.7
LSM12-201ENST00000293406 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
LSM12-201ENST00000293406 CCDC141Q6ZP82 1450 aa25.65■■□□□ 1.7
LSM12-201ENST00000293406 PRAG1Q86YV5 1406 aa25.65■■□□□ 1.7
LSM12-201ENST00000293406 CCDC144AA2RUR9 1427 aa25.64■■□□□ 1.7
LSM12-201ENST00000293406 PARD3Q8TEW0 1356 aa25.64■■□□□ 1.69
LSM12-201ENST00000293406 TRPM1Q7Z4N2 1603 aa25.63■■□□□ 1.69
LSM12-201ENST00000293406 IPO9Q96P70 1041 aaKnown RBP25.63■■□□□ 1.69
LSM12-201ENST00000293406 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
LSM12-201ENST00000293406 SAMD9LQ8IVG5 1584 aa25.61■■□□□ 1.69
LSM12-201ENST00000293406 RSPH4AQ5TD94 716 aa25.6■■□□□ 1.69
LSM12-201ENST00000293406 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
LSM12-201ENST00000293406 SALL2Q9Y467 1007 aaPredicted RBP25.59■■□□□ 1.69
LSM12-201ENST00000293406 RGL3Q3MIN7 710 aa25.58■■□□□ 1.69
LSM12-201ENST00000293406 EXOC6Q8TAG9 804 aa25.58■■□□□ 1.69
LSM12-201ENST00000293406 DEKP35659 375 aaKnown RBP25.57■■□□□ 1.68
LSM12-201ENST00000293406 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
LSM12-201ENST00000293406 PREX2Q70Z35 1606 aa25.57■■□□□ 1.68
LSM12-201ENST00000293406 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
LSM12-201ENST00000293406 NBR1Q14596 966 aa25.57■■□□□ 1.68
LSM12-201ENST00000293406 CDC42BPBQ9Y5S2 1711 aa25.56■■□□□ 1.68
LSM12-201ENST00000293406 GPRASP1Q5JY77 1395 aa25.56■■□□□ 1.68
LSM12-201ENST00000293406 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
LSM12-201ENST00000293406 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
LSM12-201ENST00000293406 WASHC2CQ9Y4E1 1318 aa25.52■■□□□ 1.68
LSM12-201ENST00000293406 A2MP01023 1474 aa25.52■■□□□ 1.68
LSM12-201ENST00000293406 PLA2R1Q13018 1463 aa25.52■■□□□ 1.68
LSM12-201ENST00000293406 UNC13BO14795 1591 aa25.51■■□□□ 1.67
LSM12-201ENST00000293406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
LSM12-201ENST00000293406 TCERG1O14776 1098 aaKnown RBP25.5■■□□□ 1.67
LSM12-201ENST00000293406 LAMC1P11047 1609 aa25.49■■□□□ 1.67
LSM12-201ENST00000293406 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
LSM12-201ENST00000293406 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
LSM12-201ENST00000293406 DISP3Q9P2K9 1392 aa25.49■■□□□ 1.67
LSM12-201ENST00000293406 CC2D1BQ5T0F9 858 aaKnown RBP25.48■■□□□ 1.67
LSM12-201ENST00000293406 TESK2Q96S53 571 aa25.48■■□□□ 1.67
LSM12-201ENST00000293406 MAST1Q9Y2H9 1570 aa25.47■■□□□ 1.67
LSM12-201ENST00000293406 CDCA7LQ96GN5 454 aa25.47■■□□□ 1.67
LSM12-201ENST00000293406 INSRP06213 1382 aa25.46■■□□□ 1.67
LSM12-201ENST00000293406 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
LSM12-201ENST00000293406 PANK3Q9H999 370 aa25.45■■□□□ 1.66
LSM12-201ENST00000293406 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
LSM12-201ENST00000293406 BLMP54132 1417 aaPredicted RBP25.44■■□□□ 1.66
LSM12-201ENST00000293406 EIF2AK4Q9P2K8 1649 aaKnown RBP25.44■■□□□ 1.66
LSM12-201ENST00000293406 ZMYM4Q5VZL5 1548 aa25.44■■□□□ 1.66
LSM12-201ENST00000293406 TMF1P82094 1093 aa25.43■■□□□ 1.66
LSM12-201ENST00000293406 IQGAP3Q86VI3 1631 aa25.42■■□□□ 1.66
LSM12-201ENST00000293406 MYO5CQ9NQX4 1742 aa25.41■■□□□ 1.66
LSM12-201ENST00000293406 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
LSM12-201ENST00000293406 TTC37Q6PGP7 1564 aa25.4■■□□□ 1.66
LSM12-201ENST00000293406 PDE4AP27815 886 aa25.4■■□□□ 1.66
LSM12-201ENST00000293406 MS4A1P11836 297 aa25.4■■□□□ 1.66
LSM12-201ENST00000293406 NPM2Q86SE8 214 aaKnown RBP25.4■■□□□ 1.66
LSM12-201ENST00000293406 RTL5Q5HYW3 569 aaPredicted RBP25.39■■□□□ 1.66
LSM12-201ENST00000293406 PLXNC1O60486 1568 aa25.39■■□□□ 1.65
LSM12-201ENST00000293406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
LSM12-201ENST00000293406 ATP10AO60312 1499 aa25.37■■□□□ 1.65
LSM12-201ENST00000293406 PLIN1O60240 522 aa25.36■■□□□ 1.65
LSM12-201ENST00000293406 BACH2Q9BYV9 841 aa25.36■■□□□ 1.65
LSM12-201ENST00000293406 DUOX2Q9NRD8 1548 aa25.34■■□□□ 1.65
LSM12-201ENST00000293406 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
LSM12-201ENST00000293406 MAGI2Q86UL8 1455 aa25.31■■□□□ 1.64
LSM12-201ENST00000293406 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
LSM12-201ENST00000293406 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
LSM12-201ENST00000293406 KNSTRNQ9Y448 316 aa25.25■■□□□ 1.63
LSM12-201ENST00000293406 WDR7Q9Y4E6 1490 aa25.25■■□□□ 1.63
LSM12-201ENST00000293406 PPP2R1AP30153 589 aa25.23■■□□□ 1.63
LSM12-201ENST00000293406 WDR43Q15061 677 aaKnown RBP eCLIP25.23■■□□□ 1.63
LSM12-201ENST00000293406 ABCC2Q92887 1545 aa25.21■■□□□ 1.63
LSM12-201ENST00000293406 C20orf194Q5TEA3 1177 aa25.2■■□□□ 1.63
LSM12-201ENST00000293406 MADDQ8WXG6 1647 aa25.19■■□□□ 1.62
LSM12-201ENST00000293406 CDCA8Q53HL2 280 aa25.19■■□□□ 1.62
LSM12-201ENST00000293406 AMER1Q5JTC6 1135 aaPredicted RBP25.18■■□□□ 1.62
LSM12-201ENST00000293406 SKAP1Q86WV1 359 aa25.18■■□□□ 1.62
LSM12-201ENST00000293406 PLEKHH1Q9ULM0 1364 aa25.18■■□□□ 1.62
LSM12-201ENST00000293406 PLCH2O75038 1416 aa25.18■■□□□ 1.62
LSM12-201ENST00000293406 IQGAP1P46940 1657 aa25.18■■□□□ 1.62
LSM12-201ENST00000293406 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
LSM12-201ENST00000293406 DUSP27Q5VZP5 1158 aa25.17■■□□□ 1.62
LSM12-201ENST00000293406 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
LSM12-201ENST00000293406 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
LSM12-201ENST00000293406 CHD1O14646 1710 aa25.16■■□□□ 1.62
LSM12-201ENST00000293406 SYNMO15061 1565 aa25.15■■□□□ 1.62
LSM12-201ENST00000293406 KDM2BQ8NHM5 1336 aa25.14■■□□□ 1.62
LSM12-201ENST00000293406 NEFMP07197 916 aa25.14■■□□□ 1.61
LSM12-201ENST00000293406 GOLGA2Q08379 1002 aa25.14■■□□□ 1.61
LSM12-201ENST00000293406 DDRGK1Q96HY6 314 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms