RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 RNF17Q9BXT8 1623 aaKnown RBP34.69■■■■□ 3.14
GFRA4-201ENST00000290417 LMTK3Q96Q04 1460 aa34.68■■■■□ 3.14
GFRA4-201ENST00000290417 PREX1Q8TCU6 1659 aa34.67■■■■□ 3.14
GFRA4-201ENST00000290417 NCOA1Q15788 1441 aa34.66■■■■□ 3.14
GFRA4-201ENST00000290417 ADGRL2O95490 1459 aa34.66■■■■□ 3.14
GFRA4-201ENST00000290417 KDM5DQ9BY66 1539 aa34.65■■■■□ 3.14
GFRA4-201ENST00000290417 ERBINQ96RT1 1412 aa34.65■■■■□ 3.14
GFRA4-201ENST00000290417 SETD1BQ9UPS6 1966 aaKnown RBP34.65■■■■□ 3.14
GFRA4-201ENST00000290417 FAM135AQ9P2D6 1515 aa34.63■■■■□ 3.13
GFRA4-201ENST00000290417 WASHC2CQ9Y4E1 1318 aa34.62■■■■□ 3.13
GFRA4-201ENST00000290417 PTPRKQ15262 1439 aa34.62■■■■□ 3.13
GFRA4-201ENST00000290417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.61■■■■□ 3.13
GFRA4-201ENST00000290417 MROH1Q8NDA8 1641 aa34.6■■■■□ 3.13
GFRA4-201ENST00000290417 ITGAEP38570 1179 aa34.59■■■■□ 3.13
GFRA4-201ENST00000290417 RRBP1Q9P2E9 1410 aaKnown RBP34.58■■■■□ 3.13
GFRA4-201ENST00000290417 NPATQ14207 1427 aa34.56■■■■□ 3.12
GFRA4-201ENST00000290417 UHRF1BP1Q6BDS2 1440 aa34.56■■■■□ 3.12
GFRA4-201ENST00000290417 ZC3H13Q5T200 1668 aaKnown RBP34.55■■■■□ 3.12
GFRA4-201ENST00000290417 HSPA2P54652 639 aa34.54■■■■□ 3.12
GFRA4-201ENST00000290417 CEP152O94986 1710 aa34.53■■■■□ 3.12
GFRA4-201ENST00000290417 ABCC3O15438 1527 aa34.52■■■■□ 3.12
GFRA4-201ENST00000290417 DEPDC5O75140 1603 aa34.51■■■■□ 3.12
GFRA4-201ENST00000290417 PRDM15P57071 1507 aaPredicted RBP34.5■■■■□ 3.11
GFRA4-201ENST00000290417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.48■■■■□ 3.11
GFRA4-201ENST00000290417 ROCK1Q13464 1354 aa34.48■■■■□ 3.11
GFRA4-201ENST00000290417 ANKRD50Q9ULJ7 1429 aa34.47■■■■□ 3.11
GFRA4-201ENST00000290417 PZPP20742 1482 aa34.47■■■■□ 3.11
GFRA4-201ENST00000290417 CAMSAP1Q5T5Y3 1602 aa34.44■■■■□ 3.1
GFRA4-201ENST00000290417 MYO3AQ8NEV4 1616 aa34.43■■■■□ 3.1
GFRA4-201ENST00000290417 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
GFRA4-201ENST00000290417 KANK1Q14678 1352 aa34.42■■■■□ 3.1
GFRA4-201ENST00000290417 CFAP65Q6ZU64 1925 aaKnown RBP34.37■■■■□ 3.09
GFRA4-201ENST00000290417 ZNF142P52746 1687 aaPredicted RBP34.36■■■■□ 3.09
GFRA4-201ENST00000290417 TNRQ92752 1358 aa34.36■■■■□ 3.09
GFRA4-201ENST00000290417 VWDEQ8N2E2 1590 aa34.34■■■■□ 3.09
GFRA4-201ENST00000290417 CEP170BQ9Y4F5 1589 aaPredicted RBP34.33■■■■□ 3.09
GFRA4-201ENST00000290417 UNC13BO14795 1591 aa34.3■■■■□ 3.08
GFRA4-201ENST00000290417 LMTK2Q8IWU2 1503 aa34.29■■■■□ 3.08
GFRA4-201ENST00000290417 SPATA31D1Q6ZQQ2 1576 aa34.29■■■■□ 3.08
GFRA4-201ENST00000290417 ERVK-7P63135 1459 aa34.28■■■■□ 3.08
GFRA4-201ENST00000290417 STRCQ7RTU9 1775 aa34.28■■■■□ 3.08
GFRA4-201ENST00000290417 ARHGAP31Q2M1Z3 1444 aa34.27■■■■□ 3.08
GFRA4-201ENST00000290417 A2ML1A8K2U0 1454 aa34.26■■■■□ 3.08
GFRA4-201ENST00000290417 GCC2Q8IWJ2 1684 aa34.22■■■■□ 3.07
GFRA4-201ENST00000290417 EFCAB6Q5THR3 1501 aa34.22■■■■□ 3.07
GFRA4-201ENST00000290417 NLRP1Q9C000 1473 aa34.21■■■■□ 3.07
GFRA4-201ENST00000290417 NAIPQ13075 1403 aa34.18■■■■□ 3.06
GFRA4-201ENST00000290417 TET3O43151 1660 aa34.18■■■■□ 3.06
GFRA4-201ENST00000290417 IQGAP3Q86VI3 1631 aa34.16■■■■□ 3.06
GFRA4-201ENST00000290417 NUP155O75694 1391 aa34.13■■■■□ 3.05
GFRA4-201ENST00000290417 UGGT1Q9NYU2 1555 aa34.13■■■■□ 3.05
GFRA4-201ENST00000290417 HFM1A2PYH4 1435 aa34.12■■■■□ 3.05
GFRA4-201ENST00000290417 PLA2R1Q13018 1463 aa34.12■■■■□ 3.05
GFRA4-201ENST00000290417 DMRT2Q9Y5R5 561 aa34.11■■■■□ 3.05
GFRA4-201ENST00000290417 RPRD2Q5VT52 1461 aaKnown RBP34.08■■■■□ 3.05
GFRA4-201ENST00000290417 NCKAP5LQ9HCH0 1330 aa34.08■■■■□ 3.05
GFRA4-201ENST00000290417 E9PCH4 1651 aa34.07■■■■□ 3.04
GFRA4-201ENST00000290417 SYNMO15061 1565 aa34.06■■■■□ 3.04
GFRA4-201ENST00000290417 THEMISQ8N1K5 641 aaPredicted RBP34.06■■■■□ 3.04
GFRA4-201ENST00000290417 NOS1P29475 1434 aa34.05■■■■□ 3.04
GFRA4-201ENST00000290417 UBR1Q8IWV7 1749 aa34.05■■■■□ 3.04
GFRA4-201ENST00000290417 PTPRTO14522 1441 aa34.03■■■■□ 3.04
GFRA4-201ENST00000290417 PIK3C2BO00750 1634 aa34.03■■■■□ 3.04
GFRA4-201ENST00000290417 PKD2Q13563 968 aa34.03■■■■□ 3.04
GFRA4-201ENST00000290417 POLR1AO95602 1720 aaPredicted RBP34.03■■■■□ 3.04
GFRA4-201ENST00000290417 IDI1Q13907 227 aa33.96■■■■□ 3.03
GFRA4-201ENST00000290417 TRIM52Q96A61 297 aa33.96■■■■□ 3.03
GFRA4-201ENST00000290417 ANKLE2Q86XL3 938 aa33.94■■■■□ 3.02
GFRA4-201ENST00000290417 STAG3Q9UJ98 1225 aa33.94■■■■□ 3.02
GFRA4-201ENST00000290417 NEURL4Q96JN8 1562 aa33.92■■■■□ 3.02
GFRA4-201ENST00000290417 SLC52A1Q9NWF4 448 aa33.92■■■■□ 3.02
GFRA4-201ENST00000290417 KDM5AP29375 1690 aaKnown RBP33.92■■■■□ 3.02
GFRA4-201ENST00000290417 ADGRB3O60242 1522 aa33.88■■■■□ 3.01
GFRA4-201ENST00000290417 SPHKAPQ2M3C7 1700 aa33.86■■■■□ 3.01
GFRA4-201ENST00000290417 SLIT1O75093 1534 aa33.85■■■■□ 3.01
GFRA4-201ENST00000290417 MYO5BQ9ULV0 1848 aa33.84■■■■□ 3.01
GFRA4-201ENST00000290417 ARHGAP23Q9P227 1491 aa33.83■■■■□ 3.01
GFRA4-201ENST00000290417 SETD5Q9C0A6 1442 aa33.82■■■■□ 3.01
GFRA4-201ENST00000290417 MED14O60244 1454 aa33.81■■■■□ 3
GFRA4-201ENST00000290417 TMEM2Q9UHN6 1383 aa33.81■■■■□ 3
GFRA4-201ENST00000290417 NPHP4O75161 1426 aaPredicted RBP33.81■■■■□ 3
GFRA4-201ENST00000290417 IQGAP1P46940 1657 aa33.8■■■■□ 3
GFRA4-201ENST00000290417 SCAF11Q99590 1463 aaKnown RBP33.8■■■■□ 3
GFRA4-201ENST00000290417 TXNDC2Q86VQ3 553 aa33.79■■■■□ 3
GFRA4-201ENST00000290417 SLC4A1APQ9BWU0 796 aaKnown RBP33.79■■■■□ 3
GFRA4-201ENST00000290417 TMEM131LA2VDJ0 1609 aa33.78■■■■□ 3
GFRA4-201ENST00000290417 LTKP29376 864 aa33.78■■■■□ 3
GFRA4-201ENST00000290417 EID1Q9Y6B2 187 aa33.78■■■■□ 3
GFRA4-201ENST00000290417 CHGAP10645 457 aaKnown RBP33.77■■■■□ 3
GFRA4-201ENST00000290417 ZNF335Q9H4Z2 1342 aaPredicted RBP33.74■■■□□ 2.99
GFRA4-201ENST00000290417 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
GFRA4-201ENST00000290417 LTBP4Q8N2S1 1624 aa33.73■■■□□ 2.99
GFRA4-201ENST00000290417 RAB3GAP2Q9H2M9 1393 aa33.7■■■□□ 2.99
GFRA4-201ENST00000290417 TRPM2O94759 1503 aa33.7■■■□□ 2.99
GFRA4-201ENST00000290417 CLTCL1P53675 1640 aa33.68■■■□□ 2.98
GFRA4-201ENST00000290417 ACIN1Q9UKV3 1341 aaKnown RBP33.67■■■□□ 2.98
GFRA4-201ENST00000290417 MPHOSPH9Q99550 1183 aa33.65■■■□□ 2.98
GFRA4-201ENST00000290417 RIMS2Q9UQ26 1411 aa33.64■■■□□ 2.98
GFRA4-201ENST00000290417 FOXD1Q16676 465 aa33.63■■■□□ 2.97
GFRA4-201ENST00000290417 ZFYVE9O95405 1425 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 1743.7 ms