RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.91
CACNA2D3-201ENST00000288197 MS4A1P11836 297 aa20.76■□□□□ 0.91
CACNA2D3-201ENST00000288197 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
CACNA2D3-201ENST00000288197 FAM161AQ3B820 660 aa20.76■□□□□ 0.91
CACNA2D3-201ENST00000288197 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
CACNA2D3-201ENST00000288197 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
CACNA2D3-201ENST00000288197 GRIN2BQ13224 1484 aa20.73■□□□□ 0.91
CACNA2D3-201ENST00000288197 BCAR3O75815 825 aa20.73■□□□□ 0.91
CACNA2D3-201ENST00000288197 CENPQQ7L2Z9 268 aaPredicted RBP20.73■□□□□ 0.91
CACNA2D3-201ENST00000288197 DHX29Q7Z478 1369 aaKnown RBP20.72■□□□□ 0.91
CACNA2D3-201ENST00000288197 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
CACNA2D3-201ENST00000288197 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
CACNA2D3-201ENST00000288197 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
CACNA2D3-201ENST00000288197 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
CACNA2D3-201ENST00000288197 PANK1Q8TE04 598 aa20.71■□□□□ 0.91
CACNA2D3-201ENST00000288197 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
CACNA2D3-201ENST00000288197 ARID4BQ4LE39 1312 aaPredicted RBP20.7■□□□□ 0.9
CACNA2D3-201ENST00000288197 KDM6BO15054 1643 aa20.7■□□□□ 0.9
CACNA2D3-201ENST00000288197 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
CACNA2D3-201ENST00000288197 NUTM2DQ5VT03 806 aaPredicted RBP20.69■□□□□ 0.9
CACNA2D3-201ENST00000288197 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
CACNA2D3-201ENST00000288197 MORC1Q86VD1 984 aa20.67■□□□□ 0.9
CACNA2D3-201ENST00000288197 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
CACNA2D3-201ENST00000288197 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
CACNA2D3-201ENST00000288197 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
CACNA2D3-201ENST00000288197 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
CACNA2D3-201ENST00000288197 MFAP1P55081 439 aaKnown RBP20.63■□□□□ 0.89
CACNA2D3-201ENST00000288197 NAP1L5Q96NT1 182 aaPredicted RBP20.63■□□□□ 0.89
CACNA2D3-201ENST00000288197 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
CACNA2D3-201ENST00000288197 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
CACNA2D3-201ENST00000288197 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
CACNA2D3-201ENST00000288197 HECW1Q76N89 1606 aa20.61■□□□□ 0.89
CACNA2D3-201ENST00000288197 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
CACNA2D3-201ENST00000288197 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
CACNA2D3-201ENST00000288197 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
CACNA2D3-201ENST00000288197 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
CACNA2D3-201ENST00000288197 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
CACNA2D3-201ENST00000288197 SLC24A1O60721 1099 aa20.58■□□□□ 0.89
CACNA2D3-201ENST00000288197 CUL7Q14999 1698 aa20.58■□□□□ 0.88
CACNA2D3-201ENST00000288197 TROQ12816 1431 aaPredicted RBP20.57■□□□□ 0.88
CACNA2D3-201ENST00000288197 KIF3BO15066 747 aa20.57■□□□□ 0.88
CACNA2D3-201ENST00000288197 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
CACNA2D3-201ENST00000288197 TEX14Q8IWB6 1497 aa20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 CFAP53Q96M91 514 aa20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 STK26Q9P289 416 aa20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 DISP3Q9P2K9 1392 aa20.55■□□□□ 0.88
CACNA2D3-201ENST00000288197 DENND4BO75064 1496 aaPredicted RBP20.54■□□□□ 0.88
CACNA2D3-201ENST00000288197 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
CACNA2D3-201ENST00000288197 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
CACNA2D3-201ENST00000288197 TPRNQ4KMQ1 711 aa20.53■□□□□ 0.88
CACNA2D3-201ENST00000288197 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
CACNA2D3-201ENST00000288197 GGT6Q6P531 493 aa20.52■□□□□ 0.88
CACNA2D3-201ENST00000288197 NCLP19338 710 aaKnown RBP20.52■□□□□ 0.88
CACNA2D3-201ENST00000288197 CFAP70Q5T0N1 1121 aa20.51■□□□□ 0.87
CACNA2D3-201ENST00000288197 E9PSI1 815 aa20.5■□□□□ 0.87
CACNA2D3-201ENST00000288197 DUSP27Q5VZP5 1158 aa20.5■□□□□ 0.87
CACNA2D3-201ENST00000288197 POGKQ9P215 609 aa20.5■□□□□ 0.87
CACNA2D3-201ENST00000288197 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
CACNA2D3-201ENST00000288197 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
CACNA2D3-201ENST00000288197 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
CACNA2D3-201ENST00000288197 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
CACNA2D3-201ENST00000288197 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
CACNA2D3-201ENST00000288197 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
CACNA2D3-201ENST00000288197 PZPP20742 1482 aa20.48■□□□□ 0.87
CACNA2D3-201ENST00000288197 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 TRIM44Q96DX7 344 aaPredicted RBP20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 PER1O15534 1290 aaPredicted RBP20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 PTPRGP23470 1445 aa20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 EFCAB2Q5VUJ9 269 aa20.47■□□□□ 0.87
CACNA2D3-201ENST00000288197 APBB1O00213 710 aa20.46■□□□□ 0.87
CACNA2D3-201ENST00000288197 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
CACNA2D3-201ENST00000288197 IGHDP01880 384 aa20.46■□□□□ 0.87
CACNA2D3-201ENST00000288197 SPINK5Q9NQ38 1064 aaPredicted RBP20.46■□□□□ 0.87
CACNA2D3-201ENST00000288197 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
CACNA2D3-201ENST00000288197 ERBINQ96RT1 1412 aa20.45■□□□□ 0.86
CACNA2D3-201ENST00000288197 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
CACNA2D3-201ENST00000288197 TMEM132EQ6IEE7 984 aa20.45■□□□□ 0.86
CACNA2D3-201ENST00000288197 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
CACNA2D3-201ENST00000288197 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
CACNA2D3-201ENST00000288197 SRPK2P78362 688 aaKnown RBP20.44■□□□□ 0.86
CACNA2D3-201ENST00000288197 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
CACNA2D3-201ENST00000288197 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
CACNA2D3-201ENST00000288197 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
CACNA2D3-201ENST00000288197 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
CACNA2D3-201ENST00000288197 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
CACNA2D3-201ENST00000288197 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
CACNA2D3-201ENST00000288197 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
CACNA2D3-201ENST00000288197 GOLGA6L3A6NEY3 463 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 SLC12A5Q9H2X9 1139 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 LRPPRCP42704 1394 aaKnown RBP20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 C8orf34Q49A92 452 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 TESK2Q96S53 571 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 PLEKHH1Q9ULM0 1364 aa20.41■□□□□ 0.86
CACNA2D3-201ENST00000288197 SEC24BO95487 1268 aa20.4■□□□□ 0.86
CACNA2D3-201ENST00000288197 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms