RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
HMGCR-201ENST00000287936 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
HMGCR-201ENST00000287936 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
HMGCR-201ENST00000287936 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
HMGCR-201ENST00000287936 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
HMGCR-201ENST00000287936 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
HMGCR-201ENST00000287936 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
HMGCR-201ENST00000287936 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
HMGCR-201ENST00000287936 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
HMGCR-201ENST00000287936 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
HMGCR-201ENST00000287936 STAC3Q96MF2 364 aa13.27□□□□□ -0.28
HMGCR-201ENST00000287936 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.28
HMGCR-201ENST00000287936 ARHGEF12Q9NZN5 1544 aa13.27□□□□□ -0.28
HMGCR-201ENST00000287936 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
HMGCR-201ENST00000287936 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.29
HMGCR-201ENST00000287936 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
HMGCR-201ENST00000287936 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
HMGCR-201ENST00000287936 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
HMGCR-201ENST00000287936 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
HMGCR-201ENST00000287936 KDM5BQ9UGL1 1544 aa13.24□□□□□ -0.29
HMGCR-201ENST00000287936 UHRF1BP1Q6BDS2 1440 aa13.24□□□□□ -0.29
HMGCR-201ENST00000287936 DENND4BO75064 1496 aaPredicted RBP13.24□□□□□ -0.29
HMGCR-201ENST00000287936 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
HMGCR-201ENST00000287936 PANK3Q9H999 370 aa13.23□□□□□ -0.29
HMGCR-201ENST00000287936 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
HMGCR-201ENST00000287936 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
HMGCR-201ENST00000287936 ABCA8O94911 1581 aa13.23□□□□□ -0.29
HMGCR-201ENST00000287936 ABCC10Q5T3U5 1492 aa13.22□□□□□ -0.29
HMGCR-201ENST00000287936 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
HMGCR-201ENST00000287936 KIF3BO15066 747 aa13.2□□□□□ -0.3
HMGCR-201ENST00000287936 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
HMGCR-201ENST00000287936 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
HMGCR-201ENST00000287936 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
HMGCR-201ENST00000287936 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
HMGCR-201ENST00000287936 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
HMGCR-201ENST00000287936 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
HMGCR-201ENST00000287936 ERBINQ96RT1 1412 aa13.17□□□□□ -0.3
HMGCR-201ENST00000287936 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
HMGCR-201ENST00000287936 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
HMGCR-201ENST00000287936 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
HMGCR-201ENST00000287936 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
HMGCR-201ENST00000287936 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
HMGCR-201ENST00000287936 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.31
HMGCR-201ENST00000287936 CFAP53Q96M91 514 aa13.15□□□□□ -0.31
HMGCR-201ENST00000287936 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
HMGCR-201ENST00000287936 PLCH2O75038 1416 aa13.12□□□□□ -0.31
HMGCR-201ENST00000287936 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
HMGCR-201ENST00000287936 KDM5CP41229 1560 aa13.12□□□□□ -0.31
HMGCR-201ENST00000287936 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
HMGCR-201ENST00000287936 NBR1Q14596 966 aa13.12□□□□□ -0.31
HMGCR-201ENST00000287936 AFAP1Q8N556 730 aa13.12□□□□□ -0.31
HMGCR-201ENST00000287936 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
HMGCR-201ENST00000287936 NEFMP07197 916 aa13.11□□□□□ -0.31
HMGCR-201ENST00000287936 CDC42BPAQ5VT25 1732 aa13.11□□□□□ -0.31
HMGCR-201ENST00000287936 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
HMGCR-201ENST00000287936 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.31
HMGCR-201ENST00000287936 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
HMGCR-201ENST00000287936 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
HMGCR-201ENST00000287936 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
HMGCR-201ENST00000287936 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
HMGCR-201ENST00000287936 NGEFQ8N5V2 710 aa13.08□□□□□ -0.32
HMGCR-201ENST00000287936 GGT6Q6P531 493 aa13.07□□□□□ -0.32
HMGCR-201ENST00000287936 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
HMGCR-201ENST00000287936 MS4A1P11836 297 aa13.06□□□□□ -0.32
HMGCR-201ENST00000287936 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
HMGCR-201ENST00000287936 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
HMGCR-201ENST00000287936 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
HMGCR-201ENST00000287936 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
HMGCR-201ENST00000287936 DISP3Q9P2K9 1392 aa13.05□□□□□ -0.32
HMGCR-201ENST00000287936 A2MP01023 1474 aa13.04□□□□□ -0.32
HMGCR-201ENST00000287936 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
HMGCR-201ENST00000287936 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
HMGCR-201ENST00000287936 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
HMGCR-201ENST00000287936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.323e-9■□□□□ 10.4
HMGCR-201ENST00000287936 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
HMGCR-201ENST00000287936 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
HMGCR-201ENST00000287936 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
HMGCR-201ENST00000287936 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
HMGCR-201ENST00000287936 MYO5CQ9NQX4 1742 aa13.03□□□□□ -0.32
HMGCR-201ENST00000287936 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
HMGCR-201ENST00000287936 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
HMGCR-201ENST00000287936 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.32
HMGCR-201ENST00000287936 E9PSI1 815 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 PLIN1O60240 522 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 TESK2Q96S53 571 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
HMGCR-201ENST00000287936 PDE4AP27815 886 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
HMGCR-201ENST00000287936 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
HMGCR-201ENST00000287936 TRAPPC8Q9Y2L5 1435 aa13.01□□□□□ -0.33
HMGCR-201ENST00000287936 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
HMGCR-201ENST00000287936 NEUROD2Q15784 382 aa13□□□□□ -0.33
HMGCR-201ENST00000287936 CFAP70Q5T0N1 1121 aa13□□□□□ -0.33
HMGCR-201ENST00000287936 ADGRL1O94910 1474 aa13□□□□□ -0.33
HMGCR-201ENST00000287936 INSRP06213 1382 aa13□□□□□ -0.33
HMGCR-201ENST00000287936 BCORL1Q5H9F3 1711 aa12.99□□□□□ -0.33
HMGCR-201ENST00000287936 TTC37Q6PGP7 1564 aa12.99□□□□□ -0.33
HMGCR-201ENST00000287936 TRAK1Q9UPV9 953 aa12.99□□□□□ -0.33
HMGCR-201ENST00000287936 FANCAO15360 1455 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms