RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 NUP160Q12769 1436 aa17.82■□□□□ 0.44
SLC28A1-201ENST00000286749 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
SLC28A1-201ENST00000286749 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
SLC28A1-201ENST00000286749 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
SLC28A1-201ENST00000286749 PTPRGP23470 1445 aa17.81■□□□□ 0.44
SLC28A1-201ENST00000286749 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
SLC28A1-201ENST00000286749 RALBP1Q15311 655 aa17.79■□□□□ 0.44
SLC28A1-201ENST00000286749 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
SLC28A1-201ENST00000286749 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
SLC28A1-201ENST00000286749 TRPM1Q7Z4N2 1603 aa17.77■□□□□ 0.44
SLC28A1-201ENST00000286749 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.43
SLC28A1-201ENST00000286749 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
SLC28A1-201ENST00000286749 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
SLC28A1-201ENST00000286749 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
SLC28A1-201ENST00000286749 SAMD9LQ8IVG5 1584 aa17.74■□□□□ 0.43
SLC28A1-201ENST00000286749 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
SLC28A1-201ENST00000286749 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
SLC28A1-201ENST00000286749 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
SLC28A1-201ENST00000286749 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
SLC28A1-201ENST00000286749 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
SLC28A1-201ENST00000286749 PREX2Q70Z35 1606 aa17.72■□□□□ 0.43
SLC28A1-201ENST00000286749 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
SLC28A1-201ENST00000286749 CCDC144AA2RUR9 1427 aa17.71■□□□□ 0.43
SLC28A1-201ENST00000286749 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
SLC28A1-201ENST00000286749 NBR1Q14596 966 aa17.7■□□□□ 0.42
SLC28A1-201ENST00000286749 EXOC6Q8TAG9 804 aa17.7■□□□□ 0.42
SLC28A1-201ENST00000286749 IPO9Q96P70 1041 aaKnown RBP17.7■□□□□ 0.42
SLC28A1-201ENST00000286749 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
SLC28A1-201ENST00000286749 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
SLC28A1-201ENST00000286749 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
SLC28A1-201ENST00000286749 NBPF1Q3BBV0 1214 aa17.68■□□□□ 0.42
SLC28A1-201ENST00000286749 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
SLC28A1-201ENST00000286749 UNC13BO14795 1591 aa17.66■□□□□ 0.42
SLC28A1-201ENST00000286749 A2MP01023 1474 aa17.66■□□□□ 0.42
SLC28A1-201ENST00000286749 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
SLC28A1-201ENST00000286749 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
SLC28A1-201ENST00000286749 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
SLC28A1-201ENST00000286749 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
SLC28A1-201ENST00000286749 LAMC1P11047 1609 aa17.64■□□□□ 0.42
SLC28A1-201ENST00000286749 GPRASP1Q5JY77 1395 aa17.64■□□□□ 0.41
SLC28A1-201ENST00000286749 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
SLC28A1-201ENST00000286749 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
SLC28A1-201ENST00000286749 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
SLC28A1-201ENST00000286749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.414e-10■■■■■ 32
SLC28A1-201ENST00000286749 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
SLC28A1-201ENST00000286749 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
SLC28A1-201ENST00000286749 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
SLC28A1-201ENST00000286749 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
SLC28A1-201ENST00000286749 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
SLC28A1-201ENST00000286749 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
SLC28A1-201ENST00000286749 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
SLC28A1-201ENST00000286749 TESK2Q96S53 571 aa17.61■□□□□ 0.41
SLC28A1-201ENST00000286749 IQGAP3Q86VI3 1631 aa17.6■□□□□ 0.41
SLC28A1-201ENST00000286749 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
SLC28A1-201ENST00000286749 TCERG1O14776 1098 aaKnown RBP17.59■□□□□ 0.41
SLC28A1-201ENST00000286749 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
SLC28A1-201ENST00000286749 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
SLC28A1-201ENST00000286749 PANK3Q9H999 370 aa17.58■□□□□ 0.41
SLC28A1-201ENST00000286749 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
SLC28A1-201ENST00000286749 WASHC2CQ9Y4E1 1318 aa17.57■□□□□ 0.4
SLC28A1-201ENST00000286749 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
SLC28A1-201ENST00000286749 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
SLC28A1-201ENST00000286749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
SLC28A1-201ENST00000286749 PLIN1O60240 522 aa17.56■□□□□ 0.4
SLC28A1-201ENST00000286749 PDE4AP27815 886 aa17.55■□□□□ 0.4
SLC28A1-201ENST00000286749 ZMYM4Q5VZL5 1548 aa17.54■□□□□ 0.4
SLC28A1-201ENST00000286749 TMF1P82094 1093 aa17.54■□□□□ 0.4
SLC28A1-201ENST00000286749 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
SLC28A1-201ENST00000286749 INSRP06213 1382 aa17.53■□□□□ 0.4
SLC28A1-201ENST00000286749 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
SLC28A1-201ENST00000286749 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
SLC28A1-201ENST00000286749 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
SLC28A1-201ENST00000286749 MS4A1P11836 297 aa17.51■□□□□ 0.39
SLC28A1-201ENST00000286749 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
SLC28A1-201ENST00000286749 ATP10AO60312 1499 aa17.5■□□□□ 0.39
SLC28A1-201ENST00000286749 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
SLC28A1-201ENST00000286749 CHD1O14646 1710 aa17.49■□□□□ 0.39
SLC28A1-201ENST00000286749 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
SLC28A1-201ENST00000286749 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
SLC28A1-201ENST00000286749 IQGAP1P46940 1657 aa17.46■□□□□ 0.39
SLC28A1-201ENST00000286749 WDR7Q9Y4E6 1490 aa17.46■□□□□ 0.39
SLC28A1-201ENST00000286749 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
SLC28A1-201ENST00000286749 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
SLC28A1-201ENST00000286749 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
SLC28A1-201ENST00000286749 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
SLC28A1-201ENST00000286749 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
SLC28A1-201ENST00000286749 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
SLC28A1-201ENST00000286749 KNSTRNQ9Y448 316 aa17.43■□□□□ 0.38
SLC28A1-201ENST00000286749 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
SLC28A1-201ENST00000286749 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
SLC28A1-201ENST00000286749 WDR43Q15061 677 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLC28A1-201ENST00000286749 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
SLC28A1-201ENST00000286749 SYNMO15061 1565 aa17.4■□□□□ 0.38
SLC28A1-201ENST00000286749 CEP152O94986 1710 aa17.4■□□□□ 0.38
SLC28A1-201ENST00000286749 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
SLC28A1-201ENST00000286749 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
SLC28A1-201ENST00000286749 MYOM1P52179 1685 aa17.38■□□□□ 0.37
SLC28A1-201ENST00000286749 ABCC1P33527 1531 aa17.38■□□□□ 0.37
SLC28A1-201ENST00000286749 PLCH2O75038 1416 aa17.38■□□□□ 0.37
SLC28A1-201ENST00000286749 NEFMP07197 916 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms