RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MROH1Q8NDA8 1641 aa32.39■■■□□ 2.78
PDLIM3-203ENST00000284771 UNC13BO14795 1591 aa32.39■■■□□ 2.78
PDLIM3-203ENST00000284771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.38■■■□□ 2.77
PDLIM3-203ENST00000284771 GGT6Q6P531 493 aa32.37■■■□□ 2.77
PDLIM3-203ENST00000284771 RNF17Q9BXT8 1623 aaKnown RBP32.36■■■□□ 2.77
PDLIM3-203ENST00000284771 NUP155O75694 1391 aa32.36■■■□□ 2.77
PDLIM3-203ENST00000284771 PRDM15P57071 1507 aaPredicted RBP32.32■■■□□ 2.76
PDLIM3-203ENST00000284771 ARID4BQ4LE39 1312 aaPredicted RBP32.32■■■□□ 2.76
PDLIM3-203ENST00000284771 PZPP20742 1482 aa32.31■■■□□ 2.76
PDLIM3-203ENST00000284771 KDM5DQ9BY66 1539 aa32.3■■■□□ 2.76
PDLIM3-203ENST00000284771 ACIN1Q9UKV3 1341 aaKnown RBP32.3■■■□□ 2.76
PDLIM3-203ENST00000284771 MLECQ14165 292 aa32.29■■■□□ 2.76
PDLIM3-203ENST00000284771 VWDEQ8N2E2 1590 aa32.29■■■□□ 2.76
PDLIM3-203ENST00000284771 DHX57Q6P158 1386 aaKnown RBP32.28■■■□□ 2.76
PDLIM3-203ENST00000284771 MPHOSPH9Q99550 1183 aa32.27■■■□□ 2.76
PDLIM3-203ENST00000284771 FAM135AQ9P2D6 1515 aa32.26■■■□□ 2.75
PDLIM3-203ENST00000284771 IQGAP3Q86VI3 1631 aa32.26■■■□□ 2.75
PDLIM3-203ENST00000284771 SLC4A1APQ9BWU0 796 aaKnown RBP32.24■■■□□ 2.75
PDLIM3-203ENST00000284771 KANK1Q14678 1352 aa32.21■■■□□ 2.75
PDLIM3-203ENST00000284771 WASHC2CQ9Y4E1 1318 aa32.2■■■□□ 2.75
PDLIM3-203ENST00000284771 CEP152O94986 1710 aa32.18■■■□□ 2.74
PDLIM3-203ENST00000284771 ABCC3O15438 1527 aa32.18■■■□□ 2.74
PDLIM3-203ENST00000284771 FOXD1Q16676 465 aa32.17■■■□□ 2.74
PDLIM3-203ENST00000284771 PPP6R1Q9UPN7 881 aa32.17■■■□□ 2.74
PDLIM3-203ENST00000284771 LMTK2Q8IWU2 1503 aa32.16■■■□□ 2.74
PDLIM3-203ENST00000284771 PKD2Q13563 968 aa32.15■■■□□ 2.74
PDLIM3-203ENST00000284771 TET3O43151 1660 aa32.11■■■□□ 2.73
PDLIM3-203ENST00000284771 ZC3H13Q5T200 1668 aaKnown RBP32.1■■■□□ 2.73
PDLIM3-203ENST00000284771 CCER1Q8TC90 406 aaPredicted RBP32.1■■■□□ 2.73
PDLIM3-203ENST00000284771 CLTCQ00610 1675 aaKnown RBP32.09■■■□□ 2.73
PDLIM3-203ENST00000284771 E9PCH4 1651 aa32.08■■■□□ 2.73
PDLIM3-203ENST00000284771 EFCAB6Q5THR3 1501 aa32.07■■■□□ 2.72
PDLIM3-203ENST00000284771 CAMSAP1Q5T5Y3 1602 aa32.07■■■□□ 2.72
PDLIM3-203ENST00000284771 NPATQ14207 1427 aa32.04■■■□□ 2.72
PDLIM3-203ENST00000284771 ADAMTSL3P82987 1691 aa32.03■■■□□ 2.72
PDLIM3-203ENST00000284771 ESF1Q9H501 851 aaKnown RBP32.02■■■□□ 2.72
PDLIM3-203ENST00000284771 FER1L4A9Z1Z3 1794 aa32.01■■■□□ 2.72
PDLIM3-203ENST00000284771 ARHGAP31Q2M1Z3 1444 aa32■■■□□ 2.71
PDLIM3-203ENST00000284771 ZMYM3Q14202 1370 aa32■■■□□ 2.71
PDLIM3-203ENST00000284771 CFAP65Q6ZU64 1925 aaKnown RBP32■■■□□ 2.71
PDLIM3-203ENST00000284771 ANKRD30BQ9BXX2 1392 aa32■■■□□ 2.71
PDLIM3-203ENST00000284771 MADDQ8WXG6 1647 aa31.99■■■□□ 2.71
PDLIM3-203ENST00000284771 PLA2R1Q13018 1463 aa31.98■■■□□ 2.71
PDLIM3-203ENST00000284771 CNTLNQ9NXG0 1405 aa31.98■■■□□ 2.71
PDLIM3-203ENST00000284771 RPRD2Q5VT52 1461 aaKnown RBP31.96■■■□□ 2.71
PDLIM3-203ENST00000284771 FBXO31Q5XUX0 539 aaPredicted RBP31.95■■■□□ 2.7
PDLIM3-203ENST00000284771 MROH2AA6NES4 1674 aa31.93■■■□□ 2.7
PDLIM3-203ENST00000284771 PTPRTO14522 1441 aa31.93■■■□□ 2.7
PDLIM3-203ENST00000284771 CEBPAP49715 358 aaPredicted RBP31.92■■■□□ 2.7
PDLIM3-203ENST00000284771 SIN3AQ96ST3 1273 aa31.92■■■□□ 2.7
PDLIM3-203ENST00000284771 CLSPNQ9HAW4 1339 aa31.91■■■□□ 2.7
PDLIM3-203ENST00000284771 RIMS1Q86UR5 1692 aaKnown RBP31.9■■■□□ 2.7
PDLIM3-203ENST00000284771 SPHKAPQ2M3C7 1700 aa31.88■■■□□ 2.69
PDLIM3-203ENST00000284771 NOS1P29475 1434 aa31.88■■■□□ 2.69
PDLIM3-203ENST00000284771 C3P01024 1663 aa31.87■■■□□ 2.69
PDLIM3-203ENST00000284771 PREX1Q8TCU6 1659 aa31.86■■■□□ 2.69
PDLIM3-203ENST00000284771 KDM4FA0A1W2PPD8 638 aa31.85■■■□□ 2.69
PDLIM3-203ENST00000284771 ERVK-7P63135 1459 aa31.84■■■□□ 2.69
PDLIM3-203ENST00000284771 TRPM2O94759 1503 aa31.83■■■□□ 2.69
PDLIM3-203ENST00000284771 SYNMO15061 1565 aa31.82■■■□□ 2.68
PDLIM3-203ENST00000284771 SPATA31D1Q6ZQQ2 1576 aa31.81■■■□□ 2.68
PDLIM3-203ENST00000284771 UGGT1Q9NYU2 1555 aa31.81■■■□□ 2.68
PDLIM3-203ENST00000284771 NEUROD1Q13562 356 aa31.8■■■□□ 2.68
PDLIM3-203ENST00000284771 PLPPR3Q6T4P5 718 aa31.8■■■□□ 2.68
PDLIM3-203ENST00000284771 CCDC144AA2RUR9 1427 aa31.78■■■□□ 2.68
PDLIM3-203ENST00000284771 PTPRMP28827 1452 aa31.77■■■□□ 2.68
PDLIM3-203ENST00000284771 CLTCL1P53675 1640 aa31.77■■■□□ 2.68
PDLIM3-203ENST00000284771 IDI1Q13907 227 aa31.73■■■□□ 2.67
PDLIM3-203ENST00000284771 PIK3C2BO00750 1634 aa31.73■■■□□ 2.67
PDLIM3-203ENST00000284771 SLC52A1Q9NWF4 448 aa31.7■■■□□ 2.66
PDLIM3-203ENST00000284771 TNRQ92752 1358 aa31.69■■■□□ 2.66
PDLIM3-203ENST00000284771 SPATA31E1Q6ZUB1 1445 aa31.64■■■□□ 2.65
PDLIM3-203ENST00000284771 KIF1BO60333 1816 aa31.6■■■□□ 2.65
PDLIM3-203ENST00000284771 RGL3Q3MIN7 710 aa31.6■■■□□ 2.65
PDLIM3-203ENST00000284771 SETD1BQ9UPS6 1966 aaKnown RBP31.59■■■□□ 2.65
PDLIM3-203ENST00000284771 CHGAP10645 457 aaKnown RBP31.57■■■□□ 2.65
PDLIM3-203ENST00000284771 L3MBTL2Q969R5 705 aa31.57■■■□□ 2.65
PDLIM3-203ENST00000284771 TMEM131LA2VDJ0 1609 aa31.56■■■□□ 2.64
PDLIM3-203ENST00000284771 ADGRB3O60242 1522 aa31.56■■■□□ 2.64
PDLIM3-203ENST00000284771 NLRP1Q9C000 1473 aa31.56■■■□□ 2.64
PDLIM3-203ENST00000284771 TONSLQ96HA7 1378 aa31.55■■■□□ 2.64
PDLIM3-203ENST00000284771 MYO5BQ9ULV0 1848 aa31.54■■■□□ 2.64
PDLIM3-203ENST00000284771 MYO3AQ8NEV4 1616 aa31.54■■■□□ 2.64
PDLIM3-203ENST00000284771 NEURL4Q96JN8 1562 aa31.53■■■□□ 2.64
PDLIM3-203ENST00000284771 TIMELESSQ9UNS1 1208 aa31.53■■■□□ 2.64
PDLIM3-203ENST00000284771 A2ML1A8K2U0 1454 aa31.5■■■□□ 2.63
PDLIM3-203ENST00000284771 UBR1Q8IWV7 1749 aa31.48■■■□□ 2.63
PDLIM3-203ENST00000284771 STAG3Q9UJ98 1225 aa31.48■■■□□ 2.63
PDLIM3-203ENST00000284771 ZNF326Q5BKZ1 582 aaKnown RBP31.46■■■□□ 2.63
PDLIM3-203ENST00000284771 DCAF11Q8TEB1 546 aa31.46■■■□□ 2.63
PDLIM3-203ENST00000284771 CEP170BQ9Y4F5 1589 aaPredicted RBP31.45■■■□□ 2.63
PDLIM3-203ENST00000284771 KDM5AP29375 1690 aaKnown RBP31.45■■■□□ 2.63
PDLIM3-203ENST00000284771 PPP1R15AO75807 674 aaPredicted RBP31.42■■■□□ 2.62
PDLIM3-203ENST00000284771 ZEB1P37275 1124 aaPredicted RBP31.42■■■□□ 2.62
PDLIM3-203ENST00000284771 KDM2AQ9Y2K7 1162 aa31.42■■■□□ 2.62
PDLIM3-203ENST00000284771 ZNF142P52746 1687 aaPredicted RBP31.41■■■□□ 2.62
PDLIM3-203ENST00000284771 UHRF1BP1Q6BDS2 1440 aa31.4■■■□□ 2.62
PDLIM3-203ENST00000284771 IFT172Q9UG01 1749 aa31.39■■■□□ 2.62
PDLIM3-203ENST00000284771 NEXMIFQ5QGS0 1516 aa31.39■■■□□ 2.62
PDLIM3-203ENST00000284771 RPGRIP1LQ68CZ1 1315 aa31.39■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms