RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 RAPGEF6Q8TEU7 1601 aa24.71■■□□□ 1.55
SSC4D-201ENST00000275560 C20orf194Q5TEA3 1177 aa24.71■■□□□ 1.55
SSC4D-201ENST00000275560 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.71■■□□□ 1.55
SSC4D-201ENST00000275560 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.55
SSC4D-201ENST00000275560 MS4A1P11836 297 aa24.7■■□□□ 1.54
SSC4D-201ENST00000275560 KTN1Q86UP2 1357 aaKnown RBP24.68■■□□□ 1.54
SSC4D-201ENST00000275560 TROQ12816 1431 aaPredicted RBP24.68■■□□□ 1.54
SSC4D-201ENST00000275560 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
SSC4D-201ENST00000275560 BRPF3Q9ULD4 1205 aa24.67■■□□□ 1.54
SSC4D-201ENST00000275560 PARD3Q8TEW0 1356 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 E9PCH4 1651 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 RGL3Q3MIN7 710 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 USP35Q9P2H5 1018 aa24.65■■□□□ 1.54
SSC4D-201ENST00000275560 ADGRL2O95490 1459 aa24.65■■□□□ 1.54
SSC4D-201ENST00000275560 PPM1GO15355 546 aaPredicted RBP24.65■■□□□ 1.54
SSC4D-201ENST00000275560 PDE3BQ13370 1112 aa24.64■■□□□ 1.54
SSC4D-201ENST00000275560 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
SSC4D-201ENST00000275560 PER1O15534 1290 aaPredicted RBP24.63■■□□□ 1.53
SSC4D-201ENST00000275560 CROCC2H7BZ55 1655 aa24.63■■□□□ 1.53
SSC4D-201ENST00000275560 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
SSC4D-201ENST00000275560 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
SSC4D-201ENST00000275560 NFKBIBQ15653 356 aa24.59■■□□□ 1.53
SSC4D-201ENST00000275560 ARHGEF12Q9NZN5 1544 aa24.58■■□□□ 1.53
SSC4D-201ENST00000275560 C9orf84Q5VXU9 1444 aa24.56■■□□□ 1.52
SSC4D-201ENST00000275560 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
SSC4D-201ENST00000275560 PANK3Q9H999 370 aa24.56■■□□□ 1.52
SSC4D-201ENST00000275560 DISP3Q9P2K9 1392 aa24.55■■□□□ 1.52
SSC4D-201ENST00000275560 GSE1Q14687 1217 aa24.54■■□□□ 1.52
SSC4D-201ENST00000275560 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
SSC4D-201ENST00000275560 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
SSC4D-201ENST00000275560 FRAT1Q92837 279 aaPredicted RBP24.53■■□□□ 1.52
SSC4D-201ENST00000275560 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
SSC4D-201ENST00000275560 BLMP54132 1417 aaPredicted RBP24.49■■□□□ 1.51
SSC4D-201ENST00000275560 KDM2BQ8NHM5 1336 aa24.49■■□□□ 1.51
SSC4D-201ENST00000275560 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
SSC4D-201ENST00000275560 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
SSC4D-201ENST00000275560 RGS3P49796 1198 aa24.48■■□□□ 1.51
SSC4D-201ENST00000275560 DAXXQ9UER7 740 aaPredicted RBP24.48■■□□□ 1.51
SSC4D-201ENST00000275560 FBLN2P98095 1184 aa24.47■■□□□ 1.51
SSC4D-201ENST00000275560 TESK2Q96S53 571 aa24.47■■□□□ 1.51
SSC4D-201ENST00000275560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
SSC4D-201ENST00000275560 C8orf34Q49A92 452 aa24.45■■□□□ 1.51
SSC4D-201ENST00000275560 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
SSC4D-201ENST00000275560 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
SSC4D-201ENST00000275560 PLEKHH1Q9ULM0 1364 aa24.44■■□□□ 1.5
SSC4D-201ENST00000275560 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
SSC4D-201ENST00000275560 FRAT2O75474 233 aaPredicted RBP24.43■■□□□ 1.5
SSC4D-201ENST00000275560 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
SSC4D-201ENST00000275560 ZMYM4Q5VZL5 1548 aa24.42■■□□□ 1.5
SSC4D-201ENST00000275560 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
SSC4D-201ENST00000275560 COL17A1Q9UMD9 1497 aaPredicted RBP24.41■■□□□ 1.5
SSC4D-201ENST00000275560 DUSP27Q5VZP5 1158 aa24.41■■□□□ 1.5
SSC4D-201ENST00000275560 FAM161AQ3B820 660 aa24.4■■□□□ 1.5
SSC4D-201ENST00000275560 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
SSC4D-201ENST00000275560 PTPRGP23470 1445 aa24.39■■□□□ 1.5
SSC4D-201ENST00000275560 FAM135AQ9P2D6 1515 aa24.38■■□□□ 1.49
SSC4D-201ENST00000275560 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
SSC4D-201ENST00000275560 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
SSC4D-201ENST00000275560 A2MP01023 1474 aa24.36■■□□□ 1.49
SSC4D-201ENST00000275560 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
SSC4D-201ENST00000275560 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
SSC4D-201ENST00000275560 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
SSC4D-201ENST00000275560 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
SSC4D-201ENST00000275560 WDR43Q15061 677 aaKnown RBP eCLIP24.34■■□□□ 1.49
SSC4D-201ENST00000275560 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
SSC4D-201ENST00000275560 TMF1P82094 1093 aa24.34■■□□□ 1.49
SSC4D-201ENST00000275560 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
SSC4D-201ENST00000275560 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
SSC4D-201ENST00000275560 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
SSC4D-201ENST00000275560 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
SSC4D-201ENST00000275560 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
SSC4D-201ENST00000275560 GOLGA2Q08379 1002 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
SSC4D-201ENST00000275560 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 BCAR3O75815 825 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 ATP10BO94823 1461 aa24.29■■□□□ 1.48
SSC4D-201ENST00000275560 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
SSC4D-201ENST00000275560 EIF5BO60841 1220 aaKnown RBP24.29■■□□□ 1.48
SSC4D-201ENST00000275560 PRDM15P57071 1507 aaPredicted RBP24.29■■□□□ 1.48
SSC4D-201ENST00000275560 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
SSC4D-201ENST00000275560 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
SSC4D-201ENST00000275560 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
SSC4D-201ENST00000275560 INSRP06213 1382 aa24.25■■□□□ 1.47
SSC4D-201ENST00000275560 IGHDP01880 384 aa24.24■■□□□ 1.47
SSC4D-201ENST00000275560 SLFN5Q08AF3 891 aa24.24■■□□□ 1.47
SSC4D-201ENST00000275560 SEC24BO95487 1268 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 MYO5CQ9NQX4 1742 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.22■■□□□ 1.47
SSC4D-201ENST00000275560 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
SSC4D-201ENST00000275560 ABCA8O94911 1581 aa24.22■■□□□ 1.47
SSC4D-201ENST00000275560 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
SSC4D-201ENST00000275560 APAF1O14727 1248 aa24.21■■□□□ 1.47
SSC4D-201ENST00000275560 WDR7Q9Y4E6 1490 aa24.2■■□□□ 1.47
SSC4D-201ENST00000275560 CCDC141Q6ZP82 1450 aa24.2■■□□□ 1.46
SSC4D-201ENST00000275560 SAMD9LQ8IVG5 1584 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms