RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 RAPGEF6Q8TEU7 1601 aa24.71■■□□□ 1.55
SSC4D-201ENST00000275560 C20orf194Q5TEA3 1177 aa24.71■■□□□ 1.55
SSC4D-201ENST00000275560 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.71■■□□□ 1.55
SSC4D-201ENST00000275560 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.55
SSC4D-201ENST00000275560 MS4A1P11836 297 aa24.7■■□□□ 1.54
SSC4D-201ENST00000275560 KTN1Q86UP2 1357 aaKnown RBP24.68■■□□□ 1.54
SSC4D-201ENST00000275560 TROQ12816 1431 aaPredicted RBP24.68■■□□□ 1.54
SSC4D-201ENST00000275560 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
SSC4D-201ENST00000275560 BRPF3Q9ULD4 1205 aa24.67■■□□□ 1.54
SSC4D-201ENST00000275560 PARD3Q8TEW0 1356 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 E9PCH4 1651 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 RGL3Q3MIN7 710 aa24.66■■□□□ 1.54
SSC4D-201ENST00000275560 USP35Q9P2H5 1018 aa24.65■■□□□ 1.54
SSC4D-201ENST00000275560 ADGRL2O95490 1459 aa24.65■■□□□ 1.54
SSC4D-201ENST00000275560 PPM1GO15355 546 aaPredicted RBP24.65■■□□□ 1.54
SSC4D-201ENST00000275560 PDE3BQ13370 1112 aa24.64■■□□□ 1.54
SSC4D-201ENST00000275560 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
SSC4D-201ENST00000275560 PER1O15534 1290 aaPredicted RBP24.63■■□□□ 1.53
SSC4D-201ENST00000275560 CROCC2H7BZ55 1655 aa24.63■■□□□ 1.53
SSC4D-201ENST00000275560 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
SSC4D-201ENST00000275560 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
SSC4D-201ENST00000275560 NFKBIBQ15653 356 aa24.59■■□□□ 1.53
SSC4D-201ENST00000275560 ARHGEF12Q9NZN5 1544 aa24.58■■□□□ 1.53
SSC4D-201ENST00000275560 C9orf84Q5VXU9 1444 aa24.56■■□□□ 1.52
SSC4D-201ENST00000275560 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
SSC4D-201ENST00000275560 PANK3Q9H999 370 aa24.56■■□□□ 1.52
SSC4D-201ENST00000275560 DISP3Q9P2K9 1392 aa24.55■■□□□ 1.52
SSC4D-201ENST00000275560 GSE1Q14687 1217 aa24.54■■□□□ 1.52
SSC4D-201ENST00000275560 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
SSC4D-201ENST00000275560 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
SSC4D-201ENST00000275560 FRAT1Q92837 279 aaPredicted RBP24.53■■□□□ 1.52
SSC4D-201ENST00000275560 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
SSC4D-201ENST00000275560 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
SSC4D-201ENST00000275560 BLMP54132 1417 aaPredicted RBP24.49■■□□□ 1.51
SSC4D-201ENST00000275560 KDM2BQ8NHM5 1336 aa24.49■■□□□ 1.51
SSC4D-201ENST00000275560 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
SSC4D-201ENST00000275560 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
SSC4D-201ENST00000275560 RGS3P49796 1198 aa24.48■■□□□ 1.51
SSC4D-201ENST00000275560 DAXXQ9UER7 740 aaPredicted RBP24.48■■□□□ 1.51
SSC4D-201ENST00000275560 FBLN2P98095 1184 aa24.47■■□□□ 1.51
SSC4D-201ENST00000275560 TESK2Q96S53 571 aa24.47■■□□□ 1.51
SSC4D-201ENST00000275560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
SSC4D-201ENST00000275560 C8orf34Q49A92 452 aa24.45■■□□□ 1.51
SSC4D-201ENST00000275560 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
SSC4D-201ENST00000275560 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
SSC4D-201ENST00000275560 PLEKHH1Q9ULM0 1364 aa24.44■■□□□ 1.5
SSC4D-201ENST00000275560 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
SSC4D-201ENST00000275560 FRAT2O75474 233 aaPredicted RBP24.43■■□□□ 1.5
SSC4D-201ENST00000275560 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
SSC4D-201ENST00000275560 ZMYM4Q5VZL5 1548 aa24.42■■□□□ 1.5
SSC4D-201ENST00000275560 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
SSC4D-201ENST00000275560 COL17A1Q9UMD9 1497 aaPredicted RBP24.41■■□□□ 1.5
SSC4D-201ENST00000275560 DUSP27Q5VZP5 1158 aa24.41■■□□□ 1.5
SSC4D-201ENST00000275560 FAM161AQ3B820 660 aa24.4■■□□□ 1.5
SSC4D-201ENST00000275560 CENPQQ7L2Z9 268 aaPredicted RBP24.4■■□□□ 1.5
SSC4D-201ENST00000275560 PTPRGP23470 1445 aa24.39■■□□□ 1.5
SSC4D-201ENST00000275560 FAM135AQ9P2D6 1515 aa24.38■■□□□ 1.49
SSC4D-201ENST00000275560 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
SSC4D-201ENST00000275560 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
SSC4D-201ENST00000275560 A2MP01023 1474 aa24.36■■□□□ 1.49
SSC4D-201ENST00000275560 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
SSC4D-201ENST00000275560 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
SSC4D-201ENST00000275560 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
SSC4D-201ENST00000275560 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
SSC4D-201ENST00000275560 WDR43Q15061 677 aaKnown RBP eCLIP24.34■■□□□ 1.49
SSC4D-201ENST00000275560 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
SSC4D-201ENST00000275560 TMF1P82094 1093 aa24.34■■□□□ 1.49
SSC4D-201ENST00000275560 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
SSC4D-201ENST00000275560 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
SSC4D-201ENST00000275560 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
SSC4D-201ENST00000275560 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
SSC4D-201ENST00000275560 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
SSC4D-201ENST00000275560 GOLGA2Q08379 1002 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
SSC4D-201ENST00000275560 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 BCAR3O75815 825 aa24.3■■□□□ 1.48
SSC4D-201ENST00000275560 ATP10BO94823 1461 aa24.29■■□□□ 1.48
SSC4D-201ENST00000275560 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
SSC4D-201ENST00000275560 EIF5BO60841 1220 aaKnown RBP24.29■■□□□ 1.48
SSC4D-201ENST00000275560 PRDM15P57071 1507 aaPredicted RBP24.29■■□□□ 1.48
SSC4D-201ENST00000275560 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
SSC4D-201ENST00000275560 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
SSC4D-201ENST00000275560 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
SSC4D-201ENST00000275560 INSRP06213 1382 aa24.25■■□□□ 1.47
SSC4D-201ENST00000275560 IGHDP01880 384 aa24.24■■□□□ 1.47
SSC4D-201ENST00000275560 SLFN5Q08AF3 891 aa24.24■■□□□ 1.47
SSC4D-201ENST00000275560 SEC24BO95487 1268 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 MYO5CQ9NQX4 1742 aa24.23■■□□□ 1.47
SSC4D-201ENST00000275560 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.22■■□□□ 1.47
SSC4D-201ENST00000275560 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
SSC4D-201ENST00000275560 ABCA8O94911 1581 aa24.22■■□□□ 1.47
SSC4D-201ENST00000275560 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
SSC4D-201ENST00000275560 APAF1O14727 1248 aa24.21■■□□□ 1.47
SSC4D-201ENST00000275560 WDR7Q9Y4E6 1490 aa24.2■■□□□ 1.47
SSC4D-201ENST00000275560 CCDC141Q6ZP82 1450 aa24.2■■□□□ 1.46
SSC4D-201ENST00000275560 SAMD9LQ8IVG5 1584 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms