RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 RALGAPBQ86X10 1494 aa24.61■■□□□ 1.53
VPS37B-201ENST00000267202 ADCY10Q96PN6 1610 aa24.61■■□□□ 1.53
VPS37B-201ENST00000267202 ABCA8O94911 1581 aa24.57■■□□□ 1.52
VPS37B-201ENST00000267202 MYBBP1AQ9BQG0 1328 aaKnown RBP24.57■■□□□ 1.52
VPS37B-201ENST00000267202 UHRF1BP1Q6BDS2 1440 aa24.55■■□□□ 1.52
VPS37B-201ENST00000267202 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
VPS37B-201ENST00000267202 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
VPS37B-201ENST00000267202 EXOC6Q8TAG9 804 aa24.53■■□□□ 1.52
VPS37B-201ENST00000267202 ARID4BQ4LE39 1312 aaPredicted RBP24.53■■□□□ 1.52
VPS37B-201ENST00000267202 PAK3O75914 559 aaPredicted RBP24.51■■□□□ 1.51
VPS37B-201ENST00000267202 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
VPS37B-201ENST00000267202 RALBP1Q15311 655 aa24.5■■□□□ 1.51
VPS37B-201ENST00000267202 PLIN1O60240 522 aa24.49■■□□□ 1.51
VPS37B-201ENST00000267202 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
VPS37B-201ENST00000267202 NPM2Q86SE8 214 aaKnown RBP24.48■■□□□ 1.51
VPS37B-201ENST00000267202 PANK3Q9H999 370 aa24.48■■□□□ 1.51
VPS37B-201ENST00000267202 CCDC141Q6ZP82 1450 aa24.48■■□□□ 1.51
VPS37B-201ENST00000267202 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
VPS37B-201ENST00000267202 SYCP2Q9BX26 1530 aa24.47■■□□□ 1.51
VPS37B-201ENST00000267202 ARHGAP5Q13017 1502 aa24.47■■□□□ 1.51
VPS37B-201ENST00000267202 KTN1Q86UP2 1357 aaKnown RBP24.47■■□□□ 1.51
VPS37B-201ENST00000267202 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
VPS37B-201ENST00000267202 BRD4O60885 1362 aaPredicted RBP24.45■■□□□ 1.5
VPS37B-201ENST00000267202 NLRP13Q86W25 1043 aa24.45■■□□□ 1.5
VPS37B-201ENST00000267202 SKAP1Q86WV1 359 aa24.45■■□□□ 1.5
VPS37B-201ENST00000267202 RCAN3Q9UKA8 241 aa24.45■■□□□ 1.5
VPS37B-201ENST00000267202 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.5
VPS37B-201ENST00000267202 ARHGEF12Q9NZN5 1544 aa24.44■■□□□ 1.5
VPS37B-201ENST00000267202 RRP1P56182 461 aaKnown RBP24.44■■□□□ 1.5
VPS37B-201ENST00000267202 PRAG1Q86YV5 1406 aa24.44■■□□□ 1.5
VPS37B-201ENST00000267202 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
VPS37B-201ENST00000267202 CDC42BPBQ9Y5S2 1711 aa24.43■■□□□ 1.5
VPS37B-201ENST00000267202 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
VPS37B-201ENST00000267202 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
VPS37B-201ENST00000267202 SLC24A1O60721 1099 aa24.41■■□□□ 1.5
VPS37B-201ENST00000267202 PER1O15534 1290 aaPredicted RBP24.41■■□□□ 1.5
VPS37B-201ENST00000267202 NOP58Q9Y2X3 529 aaKnown RBP24.4■■□□□ 1.5
VPS37B-201ENST00000267202 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
VPS37B-201ENST00000267202 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.5
VPS37B-201ENST00000267202 TESK2Q96S53 571 aa24.39■■□□□ 1.49
VPS37B-201ENST00000267202 A2MP01023 1474 aa24.38■■□□□ 1.49
VPS37B-201ENST00000267202 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
VPS37B-201ENST00000267202 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
VPS37B-201ENST00000267202 ARHGEF5Q12774 1597 aa24.34■■□□□ 1.49
VPS37B-201ENST00000267202 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
VPS37B-201ENST00000267202 RSPH4AQ5TD94 716 aa24.34■■□□□ 1.49
VPS37B-201ENST00000267202 PARD3Q8TEW0 1356 aa24.33■■□□□ 1.49
VPS37B-201ENST00000267202 TMF1P82094 1093 aa24.33■■□□□ 1.49
VPS37B-201ENST00000267202 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
VPS37B-201ENST00000267202 PREX2Q70Z35 1606 aa24.31■■□□□ 1.48
VPS37B-201ENST00000267202 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
VPS37B-201ENST00000267202 RTN4Q9NQC3 1192 aaKnown RBP24.31■■□□□ 1.48
VPS37B-201ENST00000267202 TRPM1Q7Z4N2 1603 aa24.3■■□□□ 1.48
VPS37B-201ENST00000267202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
VPS37B-201ENST00000267202 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
VPS37B-201ENST00000267202 ADAMTS8Q9UP79 889 aa24.29■■□□□ 1.48
VPS37B-201ENST00000267202 CRBNQ96SW2 442 aa24.26■■□□□ 1.47
VPS37B-201ENST00000267202 C20orf194Q5TEA3 1177 aa24.25■■□□□ 1.47
VPS37B-201ENST00000267202 E9PCH4 1651 aa24.25■■□□□ 1.47
VPS37B-201ENST00000267202 ZBTB47Q9UFB7 747 aaPredicted RBP24.24■■□□□ 1.47
VPS37B-201ENST00000267202 COL17A1Q9UMD9 1497 aaPredicted RBP24.24■■□□□ 1.47
VPS37B-201ENST00000267202 IPO9Q96P70 1041 aaKnown RBP24.24■■□□□ 1.47
VPS37B-201ENST00000267202 KNSTRNQ9Y448 316 aa24.24■■□□□ 1.47
VPS37B-201ENST00000267202 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
VPS37B-201ENST00000267202 CHD1O14646 1710 aa24.23■■□□□ 1.47
VPS37B-201ENST00000267202 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
VPS37B-201ENST00000267202 TRAPPC8Q9Y2L5 1435 aa24.21■■□□□ 1.47
VPS37B-201ENST00000267202 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
VPS37B-201ENST00000267202 GPRASP1Q5JY77 1395 aa24.19■■□□□ 1.46
VPS37B-201ENST00000267202 SPAG9O60271 1321 aaKnown RBP24.18■■□□□ 1.46
VPS37B-201ENST00000267202 MYO5CQ9NQX4 1742 aa24.18■■□□□ 1.46
VPS37B-201ENST00000267202 PDE4AP27815 886 aa24.17■■□□□ 1.46
VPS37B-201ENST00000267202 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
VPS37B-201ENST00000267202 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
VPS37B-201ENST00000267202 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
VPS37B-201ENST00000267202 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
VPS37B-201ENST00000267202 PPP2R1AP30153 589 aa24.16■■□□□ 1.46
VPS37B-201ENST00000267202 IL27Q8NEV9 243 aa24.16■■□□□ 1.46
VPS37B-201ENST00000267202 UNC13BO14795 1591 aa24.14■■□□□ 1.45
VPS37B-201ENST00000267202 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
VPS37B-201ENST00000267202 KIF3BO15066 747 aa24.13■■□□□ 1.45
VPS37B-201ENST00000267202 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
VPS37B-201ENST00000267202 CHGAP10645 457 aaKnown RBP24.11■■□□□ 1.45
VPS37B-201ENST00000267202 DUOX2Q9NRD8 1548 aa24.1■■□□□ 1.45
VPS37B-201ENST00000267202 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
VPS37B-201ENST00000267202 PLEKHH1Q9ULM0 1364 aa24.1■■□□□ 1.45
VPS37B-201ENST00000267202 ABCC2Q92887 1545 aa24.09■■□□□ 1.45
VPS37B-201ENST00000267202 IQGAP3Q86VI3 1631 aa24.09■■□□□ 1.45
VPS37B-201ENST00000267202 TCERG1O14776 1098 aaKnown RBP24.09■■□□□ 1.45
VPS37B-201ENST00000267202 PLCH2O75038 1416 aa24.08■■□□□ 1.45
VPS37B-201ENST00000267202 TNNT2P45379 298 aaPredicted RBP24.08■■□□□ 1.45
VPS37B-201ENST00000267202 AMER1Q5JTC6 1135 aaPredicted RBP24.08■■□□□ 1.44
VPS37B-201ENST00000267202 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
VPS37B-201ENST00000267202 MAST1Q9Y2H9 1570 aa24.05■■□□□ 1.44
VPS37B-201ENST00000267202 BACH2Q9BYV9 841 aa24.05■■□□□ 1.44
VPS37B-201ENST00000267202 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
VPS37B-201ENST00000267202 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
VPS37B-201ENST00000267202 APAF1O14727 1248 aa24.03■■□□□ 1.44
VPS37B-201ENST00000267202 SPINK5Q9NQ38 1064 aaPredicted RBP24.03■■□□□ 1.44
VPS37B-201ENST00000267202 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms