RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
SQLE-201ENST00000265896 SLC4A3P48751 1232 aa22.35■■□□□ 1.17
SQLE-201ENST00000265896 RALBP1Q15311 655 aa22.35■■□□□ 1.17
SQLE-201ENST00000265896 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
SQLE-201ENST00000265896 RTL5Q5HYW3 569 aaPredicted RBP22.35■■□□□ 1.17
SQLE-201ENST00000265896 CRBNQ96SW2 442 aa22.35■■□□□ 1.17
SQLE-201ENST00000265896 KTN1Q86UP2 1357 aaKnown RBP22.34■■□□□ 1.17
SQLE-201ENST00000265896 PDE4AP27815 886 aa22.34■■□□□ 1.17
SQLE-201ENST00000265896 DISP3Q9P2K9 1392 aa22.33■■□□□ 1.17
SQLE-201ENST00000265896 RTN4Q9NQC3 1192 aaKnown RBP22.32■■□□□ 1.16
SQLE-201ENST00000265896 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
SQLE-201ENST00000265896 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
SQLE-201ENST00000265896 ATP10BO94823 1461 aa22.31■■□□□ 1.16
SQLE-201ENST00000265896 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
SQLE-201ENST00000265896 CARMIL2Q6F5E8 1435 aa22.31■■□□□ 1.16
SQLE-201ENST00000265896 PER1O15534 1290 aaPredicted RBP22.3■■□□□ 1.16
SQLE-201ENST00000265896 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
SQLE-201ENST00000265896 LRPPRCP42704 1394 aaKnown RBP22.3■■□□□ 1.16
SQLE-201ENST00000265896 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
SQLE-201ENST00000265896 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
SQLE-201ENST00000265896 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
SQLE-201ENST00000265896 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
SQLE-201ENST00000265896 ARID4BQ4LE39 1312 aaPredicted RBP22.26■■□□□ 1.15
SQLE-201ENST00000265896 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
SQLE-201ENST00000265896 ADGRL2O95490 1459 aa22.25■■□□□ 1.15
SQLE-201ENST00000265896 TESK2Q96S53 571 aa22.24■■□□□ 1.15
SQLE-201ENST00000265896 UHRF1BP1Q6BDS2 1440 aa22.24■■□□□ 1.15
SQLE-201ENST00000265896 NEFMP07197 916 aa22.23■■□□□ 1.15
SQLE-201ENST00000265896 POLR1AO95602 1720 aaPredicted RBP22.22■■□□□ 1.15
SQLE-201ENST00000265896 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
SQLE-201ENST00000265896 RGS3P49796 1198 aa22.2■■□□□ 1.14
SQLE-201ENST00000265896 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
SQLE-201ENST00000265896 BACH2Q9BYV9 841 aa22.19■■□□□ 1.14
SQLE-201ENST00000265896 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
SQLE-201ENST00000265896 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
SQLE-201ENST00000265896 ITSN2Q9NZM3 1697 aa22.19■■□□□ 1.14
SQLE-201ENST00000265896 PTPRGP23470 1445 aa22.18■■□□□ 1.14
SQLE-201ENST00000265896 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
SQLE-201ENST00000265896 IL27Q8NEV9 243 aa22.18■■□□□ 1.14
SQLE-201ENST00000265896 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
SQLE-201ENST00000265896 TMF1P82094 1093 aa22.17■■□□□ 1.14
SQLE-201ENST00000265896 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
SQLE-201ENST00000265896 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
SQLE-201ENST00000265896 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
SQLE-201ENST00000265896 PLEKHH2Q8IVE3 1493 aa22.15■■□□□ 1.14
SQLE-201ENST00000265896 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
SQLE-201ENST00000265896 KNSTRNQ9Y448 316 aa22.14■■□□□ 1.14
SQLE-201ENST00000265896 PLA2R1Q13018 1463 aa22.14■■□□□ 1.14
SQLE-201ENST00000265896 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
SQLE-201ENST00000265896 A2MP01023 1474 aa22.12■■□□□ 1.13
SQLE-201ENST00000265896 CROCC2H7BZ55 1655 aa22.12■■□□□ 1.13
SQLE-201ENST00000265896 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
SQLE-201ENST00000265896 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
SQLE-201ENST00000265896 ERBINQ96RT1 1412 aa22.1■■□□□ 1.13
SQLE-201ENST00000265896 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
SQLE-201ENST00000265896 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
SQLE-201ENST00000265896 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
SQLE-201ENST00000265896 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
SQLE-201ENST00000265896 PDE3BQ13370 1112 aa22.08■■□□□ 1.13
SQLE-201ENST00000265896 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
SQLE-201ENST00000265896 ARHGEF12Q9NZN5 1544 aa22.07■■□□□ 1.12
SQLE-201ENST00000265896 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
SQLE-201ENST00000265896 BCAR3O75815 825 aa22.06■■□□□ 1.12
SQLE-201ENST00000265896 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
SQLE-201ENST00000265896 APAF1O14727 1248 aa22.06■■□□□ 1.12
SQLE-201ENST00000265896 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
SQLE-201ENST00000265896 ABCA8O94911 1581 aa22.04■■□□□ 1.12
SQLE-201ENST00000265896 NUP160Q12769 1436 aa22.04■■□□□ 1.12
SQLE-201ENST00000265896 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
SQLE-201ENST00000265896 DUSP27Q5VZP5 1158 aa22.03■■□□□ 1.12
SQLE-201ENST00000265896 RRP7AQ9Y3A4 280 aaKnown RBP22.01■■□□□ 1.11
SQLE-201ENST00000265896 SHANK2Q9UPX8 1470 aa22.01■■□□□ 1.11
SQLE-201ENST00000265896 ADCY10Q96PN6 1610 aa22.01■■□□□ 1.11
SQLE-201ENST00000265896 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
SQLE-201ENST00000265896 COL17A1Q9UMD9 1497 aaPredicted RBP22■■□□□ 1.11
SQLE-201ENST00000265896 GOLGA2Q08379 1002 aa21.99■■□□□ 1.11
SQLE-201ENST00000265896 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
SQLE-201ENST00000265896 AMER1Q5JTC6 1135 aaPredicted RBP21.99■■□□□ 1.11
SQLE-201ENST00000265896 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
SQLE-201ENST00000265896 CFAP70Q5T0N1 1121 aa21.98■■□□□ 1.11
SQLE-201ENST00000265896 TRPM1Q7Z4N2 1603 aa21.96■■□□□ 1.11
SQLE-201ENST00000265896 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
SQLE-201ENST00000265896 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
SQLE-201ENST00000265896 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
SQLE-201ENST00000265896 MS4A1P11836 297 aa21.95■■□□□ 1.1
SQLE-201ENST00000265896 NUTM2DQ5VT03 806 aaPredicted RBP21.94■■□□□ 1.1
SQLE-201ENST00000265896 E9PCH4 1651 aa21.93■■□□□ 1.1
SQLE-201ENST00000265896 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
SQLE-201ENST00000265896 PANK1Q8TE04 598 aa21.92■■□□□ 1.1
SQLE-201ENST00000265896 BRPF3Q9ULD4 1205 aa21.92■■□□□ 1.1
SQLE-201ENST00000265896 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
SQLE-201ENST00000265896 TTC37Q6PGP7 1564 aa21.92■■□□□ 1.1
SQLE-201ENST00000265896 BLMP54132 1417 aaPredicted RBP21.91■■□□□ 1.1
SQLE-201ENST00000265896 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
SQLE-201ENST00000265896 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
SQLE-201ENST00000265896 KIF3BO15066 747 aa21.91■■□□□ 1.1
SQLE-201ENST00000265896 NFKBIBQ15653 356 aa21.9■■□□□ 1.1
SQLE-201ENST00000265896 COG6Q9Y2V7 657 aa21.9■■□□□ 1.1
SQLE-201ENST00000265896 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
SQLE-201ENST00000265896 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms