RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
SCAP-201ENST00000265565 ZBTB7CA1YPR0 619 aa21.04■□□□□ 0.96
SCAP-201ENST00000265565 KIF3BO15066 747 aa21.04■□□□□ 0.96
SCAP-201ENST00000265565 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
SCAP-201ENST00000265565 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
SCAP-201ENST00000265565 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
SCAP-201ENST00000265565 IPO8O15397 1037 aaKnown RBP21.02■□□□□ 0.96
SCAP-201ENST00000265565 HFM1A2PYH4 1435 aa21.02■□□□□ 0.96
SCAP-201ENST00000265565 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
SCAP-201ENST00000265565 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
SCAP-201ENST00000265565 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
SCAP-201ENST00000265565 SOX12O15370 315 aa21■□□□□ 0.95
SCAP-201ENST00000265565 TRAK1Q9UPV9 953 aa21■□□□□ 0.95
SCAP-201ENST00000265565 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
SCAP-201ENST00000265565 GBP4Q96PP9 640 aa20.99■□□□□ 0.95
SCAP-201ENST00000265565 NUTM2DQ5VT03 806 aaPredicted RBP20.99■□□□□ 0.95
SCAP-201ENST00000265565 CUX1P39880 1505 aa20.99■□□□□ 0.95
SCAP-201ENST00000265565 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
SCAP-201ENST00000265565 E9PSI1 815 aa20.98■□□□□ 0.95
SCAP-201ENST00000265565 MSNP26038 577 aaKnown RBP20.98■□□□□ 0.95
SCAP-201ENST00000265565 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
SCAP-201ENST00000265565 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
SCAP-201ENST00000265565 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
SCAP-201ENST00000265565 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
SCAP-201ENST00000265565 BACH2Q9BYV9 841 aa20.95■□□□□ 0.94
SCAP-201ENST00000265565 NBPF1Q3BBV0 1214 aa20.95■□□□□ 0.94
SCAP-201ENST00000265565 NAIPQ13075 1403 aa20.95■□□□□ 0.94
SCAP-201ENST00000265565 BRPF3Q9ULD4 1205 aa20.95■□□□□ 0.94
SCAP-201ENST00000265565 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
SCAP-201ENST00000265565 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
SCAP-201ENST00000265565 SPAG9O60271 1321 aaKnown RBP20.91■□□□□ 0.94
SCAP-201ENST00000265565 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
SCAP-201ENST00000265565 ANKRD50Q9ULJ7 1429 aa20.91■□□□□ 0.94
SCAP-201ENST00000265565 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
SCAP-201ENST00000265565 ARID3AQ99856 593 aa20.9■□□□□ 0.94
SCAP-201ENST00000265565 SMG6Q86US8 1419 aaKnown RBP20.9■□□□□ 0.94
SCAP-201ENST00000265565 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
SCAP-201ENST00000265565 FRAT2O75474 233 aaPredicted RBP20.9■□□□□ 0.94
SCAP-201ENST00000265565 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
SCAP-201ENST00000265565 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
SCAP-201ENST00000265565 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.922e-9■■■■□ 25.7
SCAP-201ENST00000265565 OS9Q13438 667 aaPredicted RBP20.83■□□□□ 0.92
SCAP-201ENST00000265565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.921e-9■■■■■ 28.3
SCAP-201ENST00000265565 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
SCAP-201ENST00000265565 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
SCAP-201ENST00000265565 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
SCAP-201ENST00000265565 KCNJ4P48050 445 aa20.81■□□□□ 0.92
SCAP-201ENST00000265565 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
SCAP-201ENST00000265565 BCAR3O75815 825 aa20.81■□□□□ 0.92
SCAP-201ENST00000265565 MLECQ14165 292 aa20.8■□□□□ 0.92
SCAP-201ENST00000265565 PPP2R1AP30153 589 aa20.8■□□□□ 0.92
SCAP-201ENST00000265565 FOXD4L5Q5VV16 416 aaPredicted RBP20.8■□□□□ 0.92
SCAP-201ENST00000265565 FOXD4L4Q8WXT5 416 aaPredicted RBP20.8■□□□□ 0.92
SCAP-201ENST00000265565 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
SCAP-201ENST00000265565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCAP-201ENST00000265565 MCCP23508 829 aa20.78■□□□□ 0.92
SCAP-201ENST00000265565 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
SCAP-201ENST00000265565 DZIP1LQ8IYY4 767 aaKnown RBP20.77■□□□□ 0.92
SCAP-201ENST00000265565 TAOK2Q9UL54 1235 aa20.77■□□□□ 0.92
SCAP-201ENST00000265565 TERF2IPQ9NYB0 399 aa20.77■□□□□ 0.92
SCAP-201ENST00000265565 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
SCAP-201ENST00000265565 DDX49Q9Y6V7 483 aaKnown RBP20.76■□□□□ 0.91
SCAP-201ENST00000265565 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
SCAP-201ENST00000265565 PTPRGP23470 1445 aa20.75■□□□□ 0.91
SCAP-201ENST00000265565 PTMSP20962 102 aa20.75■□□□□ 0.91
SCAP-201ENST00000265565 CHMP5Q9NZZ3 219 aa20.75■□□□□ 0.91
SCAP-201ENST00000265565 HSP90AA2PQ14568 343 aaPredicted RBP20.74■□□□□ 0.91
SCAP-201ENST00000265565 CFAP44Q96MT7 982 aa20.74■□□□□ 0.91
SCAP-201ENST00000265565 HAP1P54257 671 aaPredicted RBP20.74■□□□□ 0.91
SCAP-201ENST00000265565 SLC4A10Q6U841 1118 aa20.74■□□□□ 0.91
SCAP-201ENST00000265565 GOLGA6L4A6NEF3 574 aa20.73■□□□□ 0.91
SCAP-201ENST00000265565 ZRSR1Q15695 479 aaKnown RBP20.73■□□□□ 0.91
SCAP-201ENST00000265565 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
SCAP-201ENST00000265565 LNPKQ9C0E8 428 aa20.73■□□□□ 0.91
SCAP-201ENST00000265565 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
SCAP-201ENST00000265565 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 C22orf23Q9BZE7 217 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 FGD1P98174 961 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
SCAP-201ENST00000265565 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
SCAP-201ENST00000265565 TCP11L2Q8N4U5 519 aa20.71■□□□□ 0.91
SCAP-201ENST00000265565 LMOD2Q6P5Q4 547 aa20.71■□□□□ 0.91
SCAP-201ENST00000265565 NGEFQ8N5V2 710 aa20.7■□□□□ 0.9
SCAP-201ENST00000265565 NESP48681 1621 aa20.7■□□□□ 0.9
SCAP-201ENST00000265565 DDX19BQ9UMR2 479 aa20.7■□□□□ 0.9
SCAP-201ENST00000265565 FOXD4L6Q3SYB3 417 aaPredicted RBP20.69■□□□□ 0.9
SCAP-201ENST00000265565 FOXD4L3Q6VB84 417 aaPredicted RBP20.69■□□□□ 0.9
SCAP-201ENST00000265565 TRIM6-TRIM34B2RNG4 842 aa20.69■□□□□ 0.9
SCAP-201ENST00000265565 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
SCAP-201ENST00000265565 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
SCAP-201ENST00000265565 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
SCAP-201ENST00000265565 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
SCAP-201ENST00000265565 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
SCAP-201ENST00000265565 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
SCAP-201ENST00000265565 RIPK4P57078 832 aa20.67■□□□□ 0.9
SCAP-201ENST00000265565 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
SCAP-201ENST00000265565 MTHFSP49914 203 aa20.67■□□□□ 0.9
SCAP-201ENST00000265565 VSIG10Q8N0Z9 540 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms