RNA–Protein interactions for RNA: ENST00000264235.12

GSK3B-201, Transcript of glycogen synthase kinase 3 beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GSK3B, Length 7,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-201ENST00000264235 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
GSK3B-201ENST00000264235 PSME1Q06323 249 aa19.35■□□□□ 0.69
GSK3B-201ENST00000264235 SYAP1Q96A49 352 aaPredicted RBP19.35■□□□□ 0.69
GSK3B-201ENST00000264235 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
GSK3B-201ENST00000264235 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
GSK3B-201ENST00000264235 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
GSK3B-201ENST00000264235 ATF3P18847 181 aa19.34■□□□□ 0.69
GSK3B-201ENST00000264235 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.69
GSK3B-201ENST00000264235 LRRFIP1Q32MZ4 808 aaKnown RBP19.33■□□□□ 0.69
GSK3B-201ENST00000264235 MIER1Q8N108 512 aa19.32■□□□□ 0.68
GSK3B-201ENST00000264235 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
GSK3B-201ENST00000264235 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
GSK3B-201ENST00000264235 APPP05067 770 aa19.31■□□□□ 0.68
GSK3B-201ENST00000264235 H3BQV1 296 aa19.3■□□□□ 0.68
GSK3B-201ENST00000264235 TEFQ10587 303 aa19.3■□□□□ 0.68
GSK3B-201ENST00000264235 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
GSK3B-201ENST00000264235 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
GSK3B-201ENST00000264235 NOL8Q76FK4 1167 aaKnown RBP19.3■□□□□ 0.68
GSK3B-201ENST00000264235 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
GSK3B-201ENST00000264235 TMEM132AQ24JP5 1023 aa19.29■□□□□ 0.68
GSK3B-201ENST00000264235 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
GSK3B-201ENST00000264235 GBP4Q96PP9 640 aa19.28■□□□□ 0.68
GSK3B-201ENST00000264235 ODF2Q5BJF6 829 aa19.27■□□□□ 0.67
GSK3B-201ENST00000264235 PCMTD1Q96MG8 357 aaPredicted RBP19.26■□□□□ 0.67
GSK3B-201ENST00000264235 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
GSK3B-201ENST00000264235 PTMSP20962 102 aa19.26■□□□□ 0.67
GSK3B-201ENST00000264235 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
GSK3B-201ENST00000264235 IKQ13123 557 aaPredicted RBP19.26■□□□□ 0.67
GSK3B-201ENST00000264235 PKD2Q13563 968 aa19.24■□□□□ 0.67
GSK3B-201ENST00000264235 CCDC47Q96A33 483 aaKnown RBP19.24■□□□□ 0.67
GSK3B-201ENST00000264235 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
GSK3B-201ENST00000264235 TRIM29Q14134 588 aa19.24■□□□□ 0.67
GSK3B-201ENST00000264235 TPM1P09493 284 aa19.23■□□□□ 0.67
GSK3B-201ENST00000264235 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
GSK3B-201ENST00000264235 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
GSK3B-201ENST00000264235 PPP4R2Q9NY27 417 aa19.22■□□□□ 0.67
GSK3B-201ENST00000264235 C9orf78Q9NZ63 289 aaPredicted RBP19.21■□□□□ 0.67
GSK3B-201ENST00000264235 CPLX2Q6PUV4 134 aaKnown RBP19.21■□□□□ 0.67
GSK3B-201ENST00000264235 CHMP4CQ96CF2 233 aa19.21■□□□□ 0.67
GSK3B-201ENST00000264235 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
GSK3B-201ENST00000264235 COG3Q96JB2 828 aa19.21■□□□□ 0.66
GSK3B-201ENST00000264235 ERICH2A1L162 156 aa19.2■□□□□ 0.66
GSK3B-201ENST00000264235 SLC4A3P48751 1232 aa19.2■□□□□ 0.66
GSK3B-201ENST00000264235 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
GSK3B-201ENST00000264235 EIF2S2P20042 333 aaKnown RBP19.2■□□□□ 0.66
GSK3B-201ENST00000264235 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
GSK3B-201ENST00000264235 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
GSK3B-201ENST00000264235 FYB1O15117 783 aa19.18■□□□□ 0.66
GSK3B-201ENST00000264235 CCDC27Q2M243 656 aa19.17■□□□□ 0.66
GSK3B-201ENST00000264235 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
GSK3B-201ENST00000264235 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
GSK3B-201ENST00000264235 CCDC70Q6NSX1 233 aa19.16■□□□□ 0.66
GSK3B-201ENST00000264235 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
GSK3B-201ENST00000264235 TRDNQ13061 729 aa19.16■□□□□ 0.66
GSK3B-201ENST00000264235 ZFYVE27Q5T4F4 411 aa19.15■□□□□ 0.66
GSK3B-201ENST00000264235 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
GSK3B-201ENST00000264235 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
GSK3B-201ENST00000264235 NUP155O75694 1391 aa19.15■□□□□ 0.66
GSK3B-201ENST00000264235 MFAP1P55081 439 aaKnown RBP19.14■□□□□ 0.66
GSK3B-201ENST00000264235 EEA1Q15075 1411 aa19.14■□□□□ 0.65
GSK3B-201ENST00000264235 PATL2C9JE40 543 aaKnown RBP19.14■□□□□ 0.65
GSK3B-201ENST00000264235 DDX58O95786 925 aaKnown RBP19.14■□□□□ 0.65
GSK3B-201ENST00000264235 GZF1Q9H116 711 aaPredicted RBP19.13■□□□□ 0.65
GSK3B-201ENST00000264235 VSIG10Q8N0Z9 540 aa19.13■□□□□ 0.65
GSK3B-201ENST00000264235 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
GSK3B-201ENST00000264235 PHF14O94880 888 aa19.12■□□□□ 0.65
GSK3B-201ENST00000264235 TNNT3P45378 269 aaPredicted RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.652e-6■■■■□ 21.6
GSK3B-201ENST00000264235 NOP58Q9Y2X3 529 aaKnown RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 CUX2O14529 1486 aa19.12■□□□□ 0.65
GSK3B-201ENST00000264235 PPM1FP49593 454 aaPredicted RBP19.12■□□□□ 0.65
GSK3B-201ENST00000264235 CCAR2Q8N163 923 aaKnown RBP19.11■□□□□ 0.65
GSK3B-201ENST00000264235 ANKRD20A12PQ8NF67 263 aa19.11■□□□□ 0.65
GSK3B-201ENST00000264235 ARID3AQ99856 593 aa19.11■□□□□ 0.65
GSK3B-201ENST00000264235 ST18O60284 1047 aa19.11■□□□□ 0.65
GSK3B-201ENST00000264235 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
GSK3B-201ENST00000264235 PAXIP1Q6ZW49 1069 aaPredicted RBP19.11■□□□□ 0.65
GSK3B-201ENST00000264235 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
GSK3B-201ENST00000264235 IPO7O95373 1038 aaKnown RBP19.1■□□□□ 0.65
GSK3B-201ENST00000264235 RAPGEF4Q8WZA2 1011 aa19.1■□□□□ 0.65
GSK3B-201ENST00000264235 MTMR7Q9Y216 660 aa19.1■□□□□ 0.65
GSK3B-201ENST00000264235 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
GSK3B-201ENST00000264235 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
GSK3B-201ENST00000264235 EPS15P42566 896 aa19.1■□□□□ 0.65
GSK3B-201ENST00000264235 NECTIN2Q92692 538 aa19.1■□□□□ 0.65
GSK3B-201ENST00000264235 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
GSK3B-201ENST00000264235 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
GSK3B-201ENST00000264235 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
GSK3B-201ENST00000264235 GOLGA6L19H0YKK7 550 aa19.09■□□□□ 0.65
GSK3B-201ENST00000264235 CPLX1O14810 134 aa19.09■□□□□ 0.65
GSK3B-201ENST00000264235 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.65
GSK3B-201ENST00000264235 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.64
GSK3B-201ENST00000264235 DIAPH3Q9NSV4 1193 aa19.07■□□□□ 0.64
GSK3B-201ENST00000264235 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
GSK3B-201ENST00000264235 PLIN1O60240 522 aa19.07■□□□□ 0.64
GSK3B-201ENST00000264235 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
GSK3B-201ENST00000264235 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms