RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 PDE4AP27815 886 aa21.37■■□□□ 1.01
SNCAIP-202ENST00000261368 NEFMP07197 916 aa21.37■■□□□ 1.01
SNCAIP-202ENST00000261368 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
SNCAIP-202ENST00000261368 RAPGEF6Q8TEU7 1601 aa21.36■■□□□ 1.01
SNCAIP-202ENST00000261368 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
SNCAIP-202ENST00000261368 CCDC144AA2RUR9 1427 aa21.35■■□□□ 1.01
SNCAIP-202ENST00000261368 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
SNCAIP-202ENST00000261368 IFT140Q96RY7 1462 aa21.35■■□□□ 1.01
SNCAIP-202ENST00000261368 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
SNCAIP-202ENST00000261368 TMF1P82094 1093 aa21.34■■□□□ 1.01
SNCAIP-202ENST00000261368 CRBNQ96SW2 442 aa21.34■■□□□ 1.01
SNCAIP-202ENST00000261368 KNSTRNQ9Y448 316 aa21.33■■□□□ 1.01
SNCAIP-202ENST00000261368 RTN4Q9NQC3 1192 aaKnown RBP21.32■■□□□ 1
SNCAIP-202ENST00000261368 RGS3P49796 1198 aa21.29■■□□□ 1
SNCAIP-202ENST00000261368 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
SNCAIP-202ENST00000261368 PDE3BQ13370 1112 aa21.28■■□□□ 1
SNCAIP-202ENST00000261368 KIF14Q15058 1648 aa21.28■■□□□ 1
SNCAIP-202ENST00000261368 SLC4A3P48751 1232 aa21.27■■□□□ 1
SNCAIP-202ENST00000261368 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
SNCAIP-202ENST00000261368 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
SNCAIP-202ENST00000261368 RALGAPBQ86X10 1494 aa21.24■□□□□ 0.99
SNCAIP-202ENST00000261368 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
SNCAIP-202ENST00000261368 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
SNCAIP-202ENST00000261368 PTPRGP23470 1445 aa21.22■□□□□ 0.99
SNCAIP-202ENST00000261368 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
SNCAIP-202ENST00000261368 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
SNCAIP-202ENST00000261368 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
SNCAIP-202ENST00000261368 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
SNCAIP-202ENST00000261368 MBD5Q9P267 1494 aa21.18■□□□□ 0.98
SNCAIP-202ENST00000261368 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
SNCAIP-202ENST00000261368 KDM5CP41229 1560 aa21.18■□□□□ 0.98
SNCAIP-202ENST00000261368 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.18■□□□□ 0.98
SNCAIP-202ENST00000261368 LRPPRCP42704 1394 aaKnown RBP21.18■□□□□ 0.98
SNCAIP-202ENST00000261368 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
SNCAIP-202ENST00000261368 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
SNCAIP-202ENST00000261368 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
SNCAIP-202ENST00000261368 ITSN2Q9NZM3 1697 aa21.16■□□□□ 0.98
SNCAIP-202ENST00000261368 ATP10BO94823 1461 aa21.16■□□□□ 0.98
SNCAIP-202ENST00000261368 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
SNCAIP-202ENST00000261368 UHRF1BP1Q6BDS2 1440 aa21.14■□□□□ 0.98
SNCAIP-202ENST00000261368 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.98
SNCAIP-202ENST00000261368 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
SNCAIP-202ENST00000261368 PPM1GO15355 546 aaPredicted RBP21.14■□□□□ 0.97
SNCAIP-202ENST00000261368 RSPH4AQ5TD94 716 aa21.13■□□□□ 0.97
SNCAIP-202ENST00000261368 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
SNCAIP-202ENST00000261368 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
SNCAIP-202ENST00000261368 MS4A1P11836 297 aa21.12■□□□□ 0.97
SNCAIP-202ENST00000261368 PARD3Q8TEW0 1356 aa21.11■□□□□ 0.97
SNCAIP-202ENST00000261368 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
SNCAIP-202ENST00000261368 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
SNCAIP-202ENST00000261368 TESK2Q96S53 571 aa21.09■□□□□ 0.97
SNCAIP-202ENST00000261368 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
SNCAIP-202ENST00000261368 APAF1O14727 1248 aa21.08■□□□□ 0.97
SNCAIP-202ENST00000261368 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
SNCAIP-202ENST00000261368 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.97
SNCAIP-202ENST00000261368 CDCA8Q53HL2 280 aa21.08■□□□□ 0.96
SNCAIP-202ENST00000261368 FRAT1Q92837 279 aaPredicted RBP21.08■□□□□ 0.96
SNCAIP-202ENST00000261368 IL27Q8NEV9 243 aa21.07■□□□□ 0.96
SNCAIP-202ENST00000261368 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
SNCAIP-202ENST00000261368 ARHGAP5Q13017 1502 aa21.07■□□□□ 0.96
SNCAIP-202ENST00000261368 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
SNCAIP-202ENST00000261368 ARHGEF12Q9NZN5 1544 aa21.05■□□□□ 0.96
SNCAIP-202ENST00000261368 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
SNCAIP-202ENST00000261368 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
SNCAIP-202ENST00000261368 EFCAB2Q5VUJ9 269 aa21.03■□□□□ 0.96
SNCAIP-202ENST00000261368 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
SNCAIP-202ENST00000261368 CENPQQ7L2Z9 268 aaPredicted RBP21.02■□□□□ 0.95
SNCAIP-202ENST00000261368 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
SNCAIP-202ENST00000261368 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
SNCAIP-202ENST00000261368 BCAR3O75815 825 aa21■□□□□ 0.95
SNCAIP-202ENST00000261368 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
SNCAIP-202ENST00000261368 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
SNCAIP-202ENST00000261368 ARXQ96QS3 562 aa20.98■□□□□ 0.95
SNCAIP-202ENST00000261368 KIF3BO15066 747 aa20.98■□□□□ 0.95
SNCAIP-202ENST00000261368 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
SNCAIP-202ENST00000261368 ABCC10Q5T3U5 1492 aa20.98■□□□□ 0.95
SNCAIP-202ENST00000261368 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
SNCAIP-202ENST00000261368 DUSP27Q5VZP5 1158 aa20.97■□□□□ 0.95
SNCAIP-202ENST00000261368 A2MP01023 1474 aa20.97■□□□□ 0.95
SNCAIP-202ENST00000261368 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
SNCAIP-202ENST00000261368 NFKBIBQ15653 356 aa20.95■□□□□ 0.94
SNCAIP-202ENST00000261368 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
SNCAIP-202ENST00000261368 CFAP70Q5T0N1 1121 aa20.94■□□□□ 0.94
SNCAIP-202ENST00000261368 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
SNCAIP-202ENST00000261368 COG6Q9Y2V7 657 aa20.94■□□□□ 0.94
SNCAIP-202ENST00000261368 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
SNCAIP-202ENST00000261368 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
SNCAIP-202ENST00000261368 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
SNCAIP-202ENST00000261368 CLUAP1Q96AJ1 413 aa20.92■□□□□ 0.94
SNCAIP-202ENST00000261368 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
SNCAIP-202ENST00000261368 NUP160Q12769 1436 aa20.91■□□□□ 0.94
SNCAIP-202ENST00000261368 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
SNCAIP-202ENST00000261368 AMER1Q5JTC6 1135 aaPredicted RBP20.9■□□□□ 0.94
SNCAIP-202ENST00000261368 MORC1Q86VD1 984 aa20.9■□□□□ 0.94
SNCAIP-202ENST00000261368 SLKQ9H2G2 1235 aaPredicted RBP20.9■□□□□ 0.94
SNCAIP-202ENST00000261368 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.94
SNCAIP-202ENST00000261368 TRAK1Q9UPV9 953 aa20.89■□□□□ 0.93
SNCAIP-202ENST00000261368 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
SNCAIP-202ENST00000261368 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.89■□□□□ 0.93
SNCAIP-202ENST00000261368 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms