RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MLECQ14165 292 aa31.05■■■□□ 2.56
RTCA-201ENST00000260563 MROH1Q8NDA8 1641 aa31.05■■■□□ 2.56
RTCA-201ENST00000260563 PRDM15P57071 1507 aaPredicted RBP31.04■■■□□ 2.56
RTCA-201ENST00000260563 MADDQ8WXG6 1647 aa31.03■■■□□ 2.56
RTCA-201ENST00000260563 UNC13BO14795 1591 aa31.03■■■□□ 2.56
RTCA-201ENST00000260563 ZC3H13Q5T200 1668 aaKnown RBP31.01■■■□□ 2.55
RTCA-201ENST00000260563 GGT6Q6P531 493 aa30.99■■■□□ 2.55
RTCA-201ENST00000260563 FAM135AQ9P2D6 1515 aa30.99■■■□□ 2.55
RTCA-201ENST00000260563 CLTCQ00610 1675 aaKnown RBP30.99■■■□□ 2.55
RTCA-201ENST00000260563 RIMS1Q86UR5 1692 aaKnown RBP30.99■■■□□ 2.55
RTCA-201ENST00000260563 CEP152O94986 1710 aa30.98■■■□□ 2.55
RTCA-201ENST00000260563 KDM5DQ9BY66 1539 aa30.96■■■□□ 2.55
RTCA-201ENST00000260563 SETD5Q9C0A6 1442 aa30.95■■■□□ 2.54
RTCA-201ENST00000260563 MROH2AA6NES4 1674 aa30.94■■■□□ 2.54
RTCA-201ENST00000260563 VWDEQ8N2E2 1590 aa30.9■■■□□ 2.54
RTCA-201ENST00000260563 PPP6R1Q9UPN7 881 aa30.9■■■□□ 2.54
RTCA-201ENST00000260563 IQGAP3Q86VI3 1631 aa30.9■■■□□ 2.54
RTCA-201ENST00000260563 ABCC3O15438 1527 aa30.9■■■□□ 2.54
RTCA-201ENST00000260563 CNTLNQ9NXG0 1405 aa30.89■■■□□ 2.54
RTCA-201ENST00000260563 KANK1Q14678 1352 aa30.89■■■□□ 2.54
RTCA-201ENST00000260563 ESF1Q9H501 851 aaKnown RBP30.89■■■□□ 2.54
RTCA-201ENST00000260563 CAMSAP1Q5T5Y3 1602 aa30.88■■■□□ 2.53
RTCA-201ENST00000260563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.88■■■□□ 2.536e-7■■■□□ 18.1
RTCA-201ENST00000260563 RAB3GAP2Q9H2M9 1393 aa30.86■■■□□ 2.53
RTCA-201ENST00000260563 C3P01024 1663 aa30.85■■■□□ 2.53
RTCA-201ENST00000260563 KDM4FA0A1W2PPD8 638 aa30.84■■■□□ 2.53
RTCA-201ENST00000260563 WASHC2CQ9Y4E1 1318 aa30.84■■■□□ 2.53
RTCA-201ENST00000260563 TET3O43151 1660 aa30.83■■■□□ 2.53
RTCA-201ENST00000260563 LMTK2Q8IWU2 1503 aa30.83■■■□□ 2.53
RTCA-201ENST00000260563 NUP155O75694 1391 aa30.8■■■□□ 2.52
RTCA-201ENST00000260563 PTPRMP28827 1452 aa30.79■■■□□ 2.52
RTCA-201ENST00000260563 EFCAB6Q5THR3 1501 aa30.78■■■□□ 2.52
RTCA-201ENST00000260563 ACIN1Q9UKV3 1341 aaKnown RBP30.76■■■□□ 2.52
RTCA-201ENST00000260563 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
RTCA-201ENST00000260563 ZMYM3Q14202 1370 aa30.73■■■□□ 2.51
RTCA-201ENST00000260563 E9PCH4 1651 aa30.73■■■□□ 2.51
RTCA-201ENST00000260563 CFAP65Q6ZU64 1925 aaKnown RBP30.72■■■□□ 2.51
RTCA-201ENST00000260563 PZPP20742 1482 aa30.71■■■□□ 2.51
RTCA-201ENST00000260563 HRCP23327 699 aa30.69■■■□□ 2.5
RTCA-201ENST00000260563 PREX1Q8TCU6 1659 aa30.69■■■□□ 2.5
RTCA-201ENST00000260563 ARHGAP31Q2M1Z3 1444 aa30.68■■■□□ 2.5
RTCA-201ENST00000260563 NPATQ14207 1427 aa30.66■■■□□ 2.5
RTCA-201ENST00000260563 PLPPR3Q6T4P5 718 aa30.66■■■□□ 2.5
RTCA-201ENST00000260563 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
RTCA-201ENST00000260563 CEBPAP49715 358 aaPredicted RBP30.63■■■□□ 2.49
RTCA-201ENST00000260563 SPATA31D1Q6ZQQ2 1576 aa30.61■■■□□ 2.49
RTCA-201ENST00000260563 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
RTCA-201ENST00000260563 SLC4A1APQ9BWU0 796 aaKnown RBP30.6■■■□□ 2.49
RTCA-201ENST00000260563 ERVK-7P63135 1459 aa30.6■■■□□ 2.49
RTCA-201ENST00000260563 SETD1BQ9UPS6 1966 aaKnown RBP30.58■■■□□ 2.49
RTCA-201ENST00000260563 MYO3AQ8NEV4 1616 aa30.56■■■□□ 2.48
RTCA-201ENST00000260563 MPHOSPH9Q99550 1183 aa30.55■■■□□ 2.48
RTCA-201ENST00000260563 FBXO31Q5XUX0 539 aaPredicted RBP30.52■■■□□ 2.48
RTCA-201ENST00000260563 SYNMO15061 1565 aa30.52■■■□□ 2.48
RTCA-201ENST00000260563 PKD2Q13563 968 aa30.52■■■□□ 2.48
RTCA-201ENST00000260563 NOS1P29475 1434 aa30.51■■■□□ 2.47
RTCA-201ENST00000260563 TNRQ92752 1358 aa30.5■■■□□ 2.47
RTCA-201ENST00000260563 ZNF142P52746 1687 aaPredicted RBP30.48■■■□□ 2.47
RTCA-201ENST00000260563 TRPM2O94759 1503 aa30.47■■■□□ 2.47
RTCA-201ENST00000260563 PIK3C2BO00750 1634 aa30.45■■■□□ 2.47
RTCA-201ENST00000260563 PTPRTO14522 1441 aa30.43■■■□□ 2.46
RTCA-201ENST00000260563 UHRF1BP1Q6BDS2 1440 aa30.43■■■□□ 2.46
RTCA-201ENST00000260563 NLRP1Q9C000 1473 aa30.43■■■□□ 2.46
RTCA-201ENST00000260563 CEP170BQ9Y4F5 1589 aaPredicted RBP30.42■■■□□ 2.46
RTCA-201ENST00000260563 FOXD1Q16676 465 aa30.42■■■□□ 2.46
RTCA-201ENST00000260563 AEBP2Q6ZN18 517 aaPredicted RBP30.41■■■□□ 2.46
RTCA-201ENST00000260563 UGGT1Q9NYU2 1555 aa30.4■■■□□ 2.46
RTCA-201ENST00000260563 CLTCL1P53675 1640 aa30.39■■■□□ 2.46
RTCA-201ENST00000260563 DHX57Q6P158 1386 aaKnown RBP30.39■■■□□ 2.46
RTCA-201ENST00000260563 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
RTCA-201ENST00000260563 PLA2R1Q13018 1463 aa30.37■■■□□ 2.45
RTCA-201ENST00000260563 KIF1BO60333 1816 aa30.37■■■□□ 2.45
RTCA-201ENST00000260563 KDM5AP29375 1690 aaKnown RBP30.36■■■□□ 2.45
RTCA-201ENST00000260563 A2ML1A8K2U0 1454 aa30.36■■■□□ 2.45
RTCA-201ENST00000260563 UBR1Q8IWV7 1749 aa30.36■■■□□ 2.45
RTCA-201ENST00000260563 MYO5BQ9ULV0 1848 aa30.34■■■□□ 2.45
RTCA-201ENST00000260563 LMTK3Q96Q04 1460 aa30.33■■■□□ 2.45
RTCA-201ENST00000260563 ADGRB3O60242 1522 aa30.33■■■□□ 2.45
RTCA-201ENST00000260563 SLC52A1Q9NWF4 448 aa30.32■■■□□ 2.44
RTCA-201ENST00000260563 CCDC144AA2RUR9 1427 aa30.3■■■□□ 2.44
RTCA-201ENST00000260563 TMEM131LA2VDJ0 1609 aa30.29■■■□□ 2.44
RTCA-201ENST00000260563 ANKRD30BQ9BXX2 1392 aa30.28■■■□□ 2.44
RTCA-201ENST00000260563 IDI1Q13907 227 aa30.27■■■□□ 2.44
RTCA-201ENST00000260563 STAG3Q9UJ98 1225 aa30.22■■■□□ 2.43
RTCA-201ENST00000260563 CLSPNQ9HAW4 1339 aa30.19■■■□□ 2.42
RTCA-201ENST00000260563 CHGAP10645 457 aaKnown RBP30.18■■■□□ 2.42
RTCA-201ENST00000260563 POLR1AO95602 1720 aaPredicted RBP30.18■■■□□ 2.42
RTCA-201ENST00000260563 NEURL4Q96JN8 1562 aa30.17■■■□□ 2.42
RTCA-201ENST00000260563 THEMISQ8N1K5 641 aaPredicted RBP30.15■■■□□ 2.42
RTCA-201ENST00000260563 SLIT1O75093 1534 aa30.14■■■□□ 2.42
RTCA-201ENST00000260563 HSPA2P54652 639 aa30.12■■■□□ 2.41
RTCA-201ENST00000260563 SPATA31E1Q6ZUB1 1445 aa30.1■■■□□ 2.41
RTCA-201ENST00000260563 IFT172Q9UG01 1749 aa30.1■■■□□ 2.41
RTCA-201ENST00000260563 ARHGAP23Q9P227 1491 aa30.1■■■□□ 2.41
RTCA-201ENST00000260563 PPLO60437 1756 aa30.09■■■□□ 2.41
RTCA-201ENST00000260563 TMEM2Q9UHN6 1383 aa30.09■■■□□ 2.41
RTCA-201ENST00000260563 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
RTCA-201ENST00000260563 ZNF326Q5BKZ1 582 aaKnown RBP30.06■■■□□ 2.4
RTCA-201ENST00000260563 NEXMIFQ5QGS0 1516 aa30.06■■■□□ 2.4
RTCA-201ENST00000260563 ZFYVE9O95405 1425 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms