RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
BRIP1-201ENST00000259008 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
BRIP1-201ENST00000259008 APBB1O00213 710 aa8.21□□□□□ -1.09
BRIP1-201ENST00000259008 EVC2Q86UK5 1308 aa8.21□□□□□ -1.1
BRIP1-201ENST00000259008 KTN1Q86UP2 1357 aaKnown RBP8.21□□□□□ -1.1
BRIP1-201ENST00000259008 TMEM132EQ6IEE7 984 aa8.21□□□□□ -1.1
BRIP1-201ENST00000259008 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
BRIP1-201ENST00000259008 CD109Q6YHK3 1445 aa8.2□□□□□ -1.1
BRIP1-201ENST00000259008 CASC1Q6TDU7 716 aa8.2□□□□□ -1.1
BRIP1-201ENST00000259008 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
BRIP1-201ENST00000259008 ZNF608Q9ULD9 1512 aaPredicted RBP8.2□□□□□ -1.1
BRIP1-201ENST00000259008 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
BRIP1-201ENST00000259008 CCDC146Q8IYE0 955 aa8.19□□□□□ -1.1
BRIP1-201ENST00000259008 PMFBP1Q8TBY8 1022 aa8.19□□□□□ -1.1
BRIP1-201ENST00000259008 MYOM3Q5VTT5 1437 aa8.19□□□□□ -1.1
BRIP1-201ENST00000259008 NLRP2Q9NX02 1062 aa8.19□□□□□ -1.1
BRIP1-201ENST00000259008 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
BRIP1-201ENST00000259008 KCNJ4P48050 445 aa8.18□□□□□ -1.1
BRIP1-201ENST00000259008 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
BRIP1-201ENST00000259008 FRAT2O75474 233 aaPredicted RBP8.17□□□□□ -1.1
BRIP1-201ENST00000259008 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 FGD1P98174 961 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 URB2Q14146 1524 aaKnown RBP8.17□□□□□ -1.1
BRIP1-201ENST00000259008 GORABQ5T7V8 394 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 STK31Q9BXU1 1019 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 TOP2BQ02880 1626 aa8.17□□□□□ -1.1
BRIP1-201ENST00000259008 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
BRIP1-201ENST00000259008 DHX57Q6P158 1386 aaKnown RBP8.16□□□□□ -1.1
BRIP1-201ENST00000259008 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
BRIP1-201ENST00000259008 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
BRIP1-201ENST00000259008 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
BRIP1-201ENST00000259008 GRIN2AQ12879 1464 aa8.15□□□□□ -1.1
BRIP1-201ENST00000259008 CDK11BP21127 795 aaKnown RBP8.15□□□□□ -1.1
BRIP1-201ENST00000259008 NCOA2Q15596 1464 aa8.15□□□□□ -1.1
BRIP1-201ENST00000259008 MAGI1Q96QZ7 1491 aaPredicted RBP8.15□□□□□ -1.11
BRIP1-201ENST00000259008 HECW1Q76N89 1606 aa8.15□□□□□ -1.11
BRIP1-201ENST00000259008 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 NLRP6P59044 892 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 CALD1Q05682 793 aaKnown RBP8.14□□□□□ -1.11
BRIP1-201ENST00000259008 IQGAP2Q13576 1575 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 CLSTN1O94985 981 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 RRP7AQ9Y3A4 280 aaKnown RBP8.14□□□□□ -1.11
BRIP1-201ENST00000259008 TEFQ10587 303 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 RAPGEF4Q8WZA2 1011 aa8.14□□□□□ -1.11
BRIP1-201ENST00000259008 CDK13Q14004 1512 aaKnown RBP8.14□□□□□ -1.11
BRIP1-201ENST00000259008 EIF2S2P20042 333 aaKnown RBP8.14□□□□□ -1.11
BRIP1-201ENST00000259008 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 CASKIN1Q8WXD9 1431 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 PANK3Q9H999 370 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 CGNL1Q0VF96 1302 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 ANKRD50Q9ULJ7 1429 aa8.13□□□□□ -1.11
BRIP1-201ENST00000259008 ARHGEF11O15085 1522 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 CHMP4BQ9H444 224 aaKnown RBP8.12□□□□□ -1.11
BRIP1-201ENST00000259008 FYCO1Q9BQS8 1478 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 PLB1Q6P1J6 1458 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 RGS3P49796 1198 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 FGD6Q6ZV73 1430 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
BRIP1-201ENST00000259008 TOM1L2Q6ZVM7 507 aa8.11□□□□□ -1.11
BRIP1-201ENST00000259008 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
BRIP1-201ENST00000259008 MS4A1P11836 297 aa8.11□□□□□ -1.11
BRIP1-201ENST00000259008 ADGRL1O94910 1474 aa8.11□□□□□ -1.11
BRIP1-201ENST00000259008 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
BRIP1-201ENST00000259008 KIF21AQ7Z4S6 1674 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 UBAP1LF5GYI3 381 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 KIF21BO75037 1637 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
BRIP1-201ENST00000259008 C9orf84Q5VXU9 1444 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 DDX54Q8TDD1 881 aaKnown RBP8.1□□□□□ -1.11
BRIP1-201ENST00000259008 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 NCBP3Q53F19 620 aaKnown RBP8.1□□□□□ -1.11
BRIP1-201ENST00000259008 PLEKHH2Q8IVE3 1493 aa8.1□□□□□ -1.11
BRIP1-201ENST00000259008 PDE3BQ13370 1112 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 LRRC9Q6ZRR7 1453 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.11
BRIP1-201ENST00000259008 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 PPP6R1Q9UPN7 881 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 PHLDB1Q86UU1 1377 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
BRIP1-201ENST00000259008 ANP32BQ92688 251 aaKnown RBP8.09□□□□□ -1.12
BRIP1-201ENST00000259008 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.12
BRIP1-201ENST00000259008 HMOX1P09601 288 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
BRIP1-201ENST00000259008 TROQ12816 1431 aaPredicted RBP8.08□□□□□ -1.12
BRIP1-201ENST00000259008 CUL7Q14999 1698 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 HSPA2P54652 639 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 RALBP1Q15311 655 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 SMC4Q9NTJ3 1288 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 IPO8O15397 1037 aaKnown RBP8.08□□□□□ -1.12
BRIP1-201ENST00000259008 RAD21O60216 631 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
BRIP1-201ENST00000259008 AMER1Q5JTC6 1135 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms