RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
USP44-201ENST00000258499 TROQ12816 1431 aaPredicted RBP6.19□□□□□ -1.42
USP44-201ENST00000258499 PPM1GO15355 546 aaPredicted RBP6.19□□□□□ -1.42
USP44-201ENST00000258499 IQGAP2Q13576 1575 aa6.19□□□□□ -1.42
USP44-201ENST00000258499 PLB1Q6P1J6 1458 aa6.19□□□□□ -1.42
USP44-201ENST00000258499 MAGI3Q5TCQ9 1506 aa6.18□□□□□ -1.42
USP44-201ENST00000258499 EIF5BO60841 1220 aaKnown RBP6.18□□□□□ -1.42
USP44-201ENST00000258499 CDCA8Q53HL2 280 aa6.18□□□□□ -1.42
USP44-201ENST00000258499 ADAMTS8Q9UP79 889 aa6.18□□□□□ -1.42
USP44-201ENST00000258499 BRD4O60885 1362 aaPredicted RBP6.18□□□□□ -1.42
USP44-201ENST00000258499 ARID4BQ4LE39 1312 aaPredicted RBP6.18□□□□□ -1.42
USP44-201ENST00000258499 ZNF608Q9ULD9 1512 aaPredicted RBP6.18□□□□□ -1.42
USP44-201ENST00000258499 GOLGA2Q08379 1002 aa6.17□□□□□ -1.42
USP44-201ENST00000258499 C9orf84Q5VXU9 1444 aa6.17□□□□□ -1.42
USP44-201ENST00000258499 PTPRGP23470 1445 aa6.16□□□□□ -1.42
USP44-201ENST00000258499 UPF2Q9HAU5 1272 aaKnown RBP6.16□□□□□ -1.42
USP44-201ENST00000258499 KDM6BO15054 1643 aa6.16□□□□□ -1.42
USP44-201ENST00000258499 CTTNBP2Q8WZ74 1663 aa6.16□□□□□ -1.42
USP44-201ENST00000258499 CAMSAP2Q08AD1 1489 aa6.16□□□□□ -1.42
USP44-201ENST00000258499 APAF1O14727 1248 aa6.16□□□□□ -1.42
USP44-201ENST00000258499 TCOF1Q13428 1488 aaKnown RBP6.16□□□□□ -1.42
USP44-201ENST00000258499 KIAA0586Q9BVV6 1533 aa6.15□□□□□ -1.42
USP44-201ENST00000258499 LAMC3Q9Y6N6 1575 aa6.15□□□□□ -1.42
USP44-201ENST00000258499 DHX29Q7Z478 1369 aaKnown RBP6.15□□□□□ -1.42
USP44-201ENST00000258499 SAFB2Q14151 953 aaKnown RBP eCLIP6.15□□□□□ -1.42
USP44-201ENST00000258499 C20orf194Q5TEA3 1177 aa6.15□□□□□ -1.42
USP44-201ENST00000258499 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
USP44-201ENST00000258499 RSPH4AQ5TD94 716 aa6.15□□□□□ -1.43
USP44-201ENST00000258499 EFCAB2Q5VUJ9 269 aa6.15□□□□□ -1.43
USP44-201ENST00000258499 KIF3BO15066 747 aa6.15□□□□□ -1.43
USP44-201ENST00000258499 NUP153P49790 1475 aaKnown RBP6.14□□□□□ -1.43
USP44-201ENST00000258499 CLUAP1Q96AJ1 413 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 BCL2L13Q9BXK5 485 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 MRC2Q9UBG0 1479 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 ARHGEF11O15085 1522 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 MAPK8IP2Q13387 824 aaPredicted RBP6.14□□□□□ -1.43
USP44-201ENST00000258499 BACH2Q9BYV9 841 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 TEX14Q8IWB6 1497 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 SPRYD3Q8NCJ5 442 aa6.14□□□□□ -1.43
USP44-201ENST00000258499 SLKQ9H2G2 1235 aaPredicted RBP6.14□□□□□ -1.43
USP44-201ENST00000258499 GPATCH8Q9UKJ3 1502 aaKnown RBP6.13□□□□□ -1.43
USP44-201ENST00000258499 MS4A1P11836 297 aa6.13□□□□□ -1.43
USP44-201ENST00000258499 MORC1Q86VD1 984 aa6.13□□□□□ -1.43
USP44-201ENST00000258499 DENND4BO75064 1496 aaPredicted RBP6.13□□□□□ -1.43
USP44-201ENST00000258499 SPATA31E1Q6ZUB1 1445 aa6.13□□□□□ -1.43
USP44-201ENST00000258499 SPAG9O60271 1321 aaKnown RBP6.13□□□□□ -1.43
USP44-201ENST00000258499 NUTM2DQ5VT03 806 aaPredicted RBP6.13□□□□□ -1.43
USP44-201ENST00000258499 SAMD9Q5K651 1589 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 PPP2R1AP30153 589 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 CENPQQ7L2Z9 268 aaPredicted RBP6.12□□□□□ -1.43
USP44-201ENST00000258499 AFAP1Q8N556 730 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 IL27Q8NEV9 243 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 COG6Q9Y2V7 657 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 U2SURPO15042 1029 aaKnown RBP6.12□□□□□ -1.43
USP44-201ENST00000258499 GGT6Q6P531 493 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 FTSJ3Q8IY81 847 aaKnown RBP6.12□□□□□ -1.43
USP44-201ENST00000258499 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.12□□□□□ -1.43
USP44-201ENST00000258499 TRAK1Q9UPV9 953 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 PZPP20742 1482 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 IFT140Q96RY7 1462 aa6.12□□□□□ -1.43
USP44-201ENST00000258499 BECN1Q14457 450 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 FAM161AQ3B820 660 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 WDR62O43379 1518 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 GRIN2AQ12879 1464 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 BCAR3O75815 825 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 CFAP53Q96M91 514 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 KDM5BQ9UGL1 1544 aa6.11□□□□□ -1.43
USP44-201ENST00000258499 HSP90AA1P07900 732 aaKnown RBP6.1□□□□□ -1.43
USP44-201ENST00000258499 U2AF1L5P0DN76 240 aaPredicted RBP6.1□□□□□ -1.43
USP44-201ENST00000258499 U2AF1Q01081 240 aaKnown RBP eCLIP6.1□□□□□ -1.43
USP44-201ENST00000258499 DISP3Q9P2K9 1392 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 CENPJQ9HC77 1338 aaPredicted RBP6.1□□□□□ -1.43
USP44-201ENST00000258499 NPM1P06748 294 aaKnown RBP eCLIP6.1□□□□□ -1.43
USP44-201ENST00000258499 CFAP70Q5T0N1 1121 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 MAGI1Q96QZ7 1491 aaPredicted RBP6.1□□□□□ -1.43
USP44-201ENST00000258499 STK26Q9P289 416 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 STAG3Q9UJ98 1225 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 ABCA5Q8WWZ7 1642 aa6.1□□□□□ -1.43
USP44-201ENST00000258499 NFKBIBQ15653 356 aa6.09□□□□□ -1.43
USP44-201ENST00000258499 KANK1Q14678 1352 aa6.09□□□□□ -1.43
USP44-201ENST00000258499 USP35Q9P2H5 1018 aa6.09□□□□□ -1.43
USP44-201ENST00000258499 ERBINQ96RT1 1412 aa6.09□□□□□ -1.43
USP44-201ENST00000258499 PER1O15534 1290 aaPredicted RBP6.09□□□□□ -1.44
USP44-201ENST00000258499 RNF123Q5XPI4 1314 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 DISP1Q96F81 1524 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 E9PSI1 815 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 GSE1Q14687 1217 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 SYNJ2O15056 1496 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 WASHC2CQ9Y4E1 1318 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 ARHGAP5Q13017 1502 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 TESK2Q96S53 571 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 BRPF3Q9ULD4 1205 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 RALGAPBQ86X10 1494 aa6.08□□□□□ -1.44
USP44-201ENST00000258499 SRPK2P78362 688 aaKnown RBP6.08□□□□□ -1.44
USP44-201ENST00000258499 GZF1Q9H116 711 aaPredicted RBP6.08□□□□□ -1.44
USP44-201ENST00000258499 TMEM132EQ6IEE7 984 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 EIF3AQ14152 1382 aaKnown RBP6.07□□□□□ -1.44
USP44-201ENST00000258499 RAPGEF6Q8TEU7 1601 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms