RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
H3F3B-201ENST00000254810 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
H3F3B-201ENST00000254810 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
H3F3B-201ENST00000254810 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
H3F3B-201ENST00000254810 BACH2Q9BYV9 841 aa17.88■□□□□ 0.45
H3F3B-201ENST00000254810 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
H3F3B-201ENST00000254810 PARD3Q8TEW0 1356 aa17.87■□□□□ 0.45
H3F3B-201ENST00000254810 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
H3F3B-201ENST00000254810 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
H3F3B-201ENST00000254810 NLRP13Q86W25 1043 aa17.85■□□□□ 0.45
H3F3B-201ENST00000254810 IL27Q8NEV9 243 aa17.85■□□□□ 0.45
H3F3B-201ENST00000254810 PER1O15534 1290 aaPredicted RBP17.84■□□□□ 0.45
H3F3B-201ENST00000254810 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
H3F3B-201ENST00000254810 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.44
H3F3B-201ENST00000254810 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
H3F3B-201ENST00000254810 PTPRGP23470 1445 aa17.81■□□□□ 0.44
H3F3B-201ENST00000254810 CC2D1BQ5T0F9 858 aaKnown RBP17.81■□□□□ 0.44
H3F3B-201ENST00000254810 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
H3F3B-201ENST00000254810 NEFMP07197 916 aa17.8■□□□□ 0.44
H3F3B-201ENST00000254810 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
H3F3B-201ENST00000254810 CRBNQ96SW2 442 aa17.8■□□□□ 0.44
H3F3B-201ENST00000254810 SHANK2Q9UPX8 1470 aa17.8■□□□□ 0.44
H3F3B-201ENST00000254810 TRPM1Q7Z4N2 1603 aa17.79■□□□□ 0.44
H3F3B-201ENST00000254810 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
H3F3B-201ENST00000254810 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
H3F3B-201ENST00000254810 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
H3F3B-201ENST00000254810 MS4A1P11836 297 aa17.78■□□□□ 0.44
H3F3B-201ENST00000254810 C20orf194Q5TEA3 1177 aa17.78■□□□□ 0.44
H3F3B-201ENST00000254810 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
H3F3B-201ENST00000254810 RGL3Q3MIN7 710 aa17.78■□□□□ 0.44
H3F3B-201ENST00000254810 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
H3F3B-201ENST00000254810 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
H3F3B-201ENST00000254810 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
H3F3B-201ENST00000254810 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
H3F3B-201ENST00000254810 TESK2Q96S53 571 aa17.75■□□□□ 0.43
H3F3B-201ENST00000254810 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
H3F3B-201ENST00000254810 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
H3F3B-201ENST00000254810 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
H3F3B-201ENST00000254810 ATP10BO94823 1461 aa17.74■□□□□ 0.43
H3F3B-201ENST00000254810 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
H3F3B-201ENST00000254810 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
H3F3B-201ENST00000254810 PANK3Q9H999 370 aa17.73■□□□□ 0.43
H3F3B-201ENST00000254810 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
H3F3B-201ENST00000254810 ABCA8O94911 1581 aa17.73■□□□□ 0.43
H3F3B-201ENST00000254810 FBLN2P98095 1184 aa17.72■□□□□ 0.43
H3F3B-201ENST00000254810 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
H3F3B-201ENST00000254810 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
H3F3B-201ENST00000254810 A2MP01023 1474 aa17.71■□□□□ 0.43
H3F3B-201ENST00000254810 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
H3F3B-201ENST00000254810 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
H3F3B-201ENST00000254810 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
H3F3B-201ENST00000254810 ZMYM4Q5VZL5 1548 aa17.68■□□□□ 0.42
H3F3B-201ENST00000254810 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
H3F3B-201ENST00000254810 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
H3F3B-201ENST00000254810 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
H3F3B-201ENST00000254810 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
H3F3B-201ENST00000254810 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
H3F3B-201ENST00000254810 ERBINQ96RT1 1412 aa17.67■□□□□ 0.42
H3F3B-201ENST00000254810 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
H3F3B-201ENST00000254810 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
H3F3B-201ENST00000254810 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
H3F3B-201ENST00000254810 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
H3F3B-201ENST00000254810 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
H3F3B-201ENST00000254810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
H3F3B-201ENST00000254810 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
H3F3B-201ENST00000254810 INSRP06213 1382 aa17.63■□□□□ 0.41
H3F3B-201ENST00000254810 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
H3F3B-201ENST00000254810 MYO5CQ9NQX4 1742 aa17.63■□□□□ 0.41
H3F3B-201ENST00000254810 NUP160Q12769 1436 aa17.62■□□□□ 0.41
H3F3B-201ENST00000254810 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
H3F3B-201ENST00000254810 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
H3F3B-201ENST00000254810 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
H3F3B-201ENST00000254810 NFKBIBQ15653 356 aa17.61■□□□□ 0.41
H3F3B-201ENST00000254810 LAMC1P11047 1609 aa17.61■□□□□ 0.41
H3F3B-201ENST00000254810 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
H3F3B-201ENST00000254810 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
H3F3B-201ENST00000254810 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
H3F3B-201ENST00000254810 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
H3F3B-201ENST00000254810 TMF1P82094 1093 aa17.58■□□□□ 0.41
H3F3B-201ENST00000254810 WDR7Q9Y4E6 1490 aa17.58■□□□□ 0.41
H3F3B-201ENST00000254810 UNC13BO14795 1591 aa17.58■□□□□ 0.4
H3F3B-201ENST00000254810 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
H3F3B-201ENST00000254810 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
H3F3B-201ENST00000254810 SYCP2Q9BX26 1530 aa17.58■□□□□ 0.4
H3F3B-201ENST00000254810 PRKCSHP14314 528 aaPredicted RBP17.57■□□□□ 0.4
H3F3B-201ENST00000254810 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
H3F3B-201ENST00000254810 PREX2Q70Z35 1606 aa17.56■□□□□ 0.4
H3F3B-201ENST00000254810 GSE1Q14687 1217 aa17.56■□□□□ 0.4
H3F3B-201ENST00000254810 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
H3F3B-201ENST00000254810 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
H3F3B-201ENST00000254810 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
H3F3B-201ENST00000254810 RGS3P49796 1198 aa17.54■□□□□ 0.4
H3F3B-201ENST00000254810 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
H3F3B-201ENST00000254810 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
H3F3B-201ENST00000254810 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
H3F3B-201ENST00000254810 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
H3F3B-201ENST00000254810 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
H3F3B-201ENST00000254810 IQGAP3Q86VI3 1631 aa17.52■□□□□ 0.4
H3F3B-201ENST00000254810 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
H3F3B-201ENST00000254810 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms