RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KIF3BO15066 747 aa21.21■□□□□ 0.99
VPS25-201ENST00000253794 KDM5DQ9BY66 1539 aa21.2■□□□□ 0.98
VPS25-201ENST00000253794 UNC13BO14795 1591 aa21.2■□□□□ 0.98
VPS25-201ENST00000253794 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
VPS25-201ENST00000253794 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
VPS25-201ENST00000253794 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
VPS25-201ENST00000253794 ACIN1Q9UKV3 1341 aaKnown RBP21.17■□□□□ 0.98
VPS25-201ENST00000253794 HRCP23327 699 aa21.16■□□□□ 0.98
VPS25-201ENST00000253794 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.98
VPS25-201ENST00000253794 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
VPS25-201ENST00000253794 CNTLNQ9NXG0 1405 aa21.13■□□□□ 0.97
VPS25-201ENST00000253794 GGT6Q6P531 493 aa21.13■□□□□ 0.97
VPS25-201ENST00000253794 RAB3GAP2Q9H2M9 1393 aa21.12■□□□□ 0.97
VPS25-201ENST00000253794 ABCC3O15438 1527 aa21.12■□□□□ 0.97
VPS25-201ENST00000253794 IQGAP3Q86VI3 1631 aa21.11■□□□□ 0.97
VPS25-201ENST00000253794 MADDQ8WXG6 1647 aa21.11■□□□□ 0.97
VPS25-201ENST00000253794 KANK1Q14678 1352 aa21.1■□□□□ 0.97
VPS25-201ENST00000253794 MLECQ14165 292 aa21.1■□□□□ 0.97
VPS25-201ENST00000253794 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
VPS25-201ENST00000253794 MROH2AA6NES4 1674 aa21.09■□□□□ 0.97
VPS25-201ENST00000253794 ARHGAP31Q2M1Z3 1444 aa21.06■□□□□ 0.96
VPS25-201ENST00000253794 KDM4FA0A1W2PPD8 638 aa21.06■□□□□ 0.96
VPS25-201ENST00000253794 NUP155O75694 1391 aa21.06■□□□□ 0.96
VPS25-201ENST00000253794 WASHC2CQ9Y4E1 1318 aa21.05■□□□□ 0.96
VPS25-201ENST00000253794 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
VPS25-201ENST00000253794 TET3O43151 1660 aa21.04■□□□□ 0.96
VPS25-201ENST00000253794 CEP152O94986 1710 aa21.04■□□□□ 0.96
VPS25-201ENST00000253794 EFCAB6Q5THR3 1501 aa21.04■□□□□ 0.96
VPS25-201ENST00000253794 PZPP20742 1482 aa21.03■□□□□ 0.96
VPS25-201ENST00000253794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.967e-7■■□□□ 11.5
VPS25-201ENST00000253794 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
VPS25-201ENST00000253794 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.96
VPS25-201ENST00000253794 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
VPS25-201ENST00000253794 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
VPS25-201ENST00000253794 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
VPS25-201ENST00000253794 PTPRMP28827 1452 aa21.01■□□□□ 0.95
VPS25-201ENST00000253794 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
VPS25-201ENST00000253794 NPATQ14207 1427 aa20.98■□□□□ 0.95
VPS25-201ENST00000253794 C3P01024 1663 aa20.98■□□□□ 0.95
VPS25-201ENST00000253794 TRIM52Q96A61 297 aa20.97■□□□□ 0.95
VPS25-201ENST00000253794 E9PCH4 1651 aa20.94■□□□□ 0.94
VPS25-201ENST00000253794 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
VPS25-201ENST00000253794 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
VPS25-201ENST00000253794 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
VPS25-201ENST00000253794 NOS1P29475 1434 aa20.92■□□□□ 0.94
VPS25-201ENST00000253794 ERVK-7P63135 1459 aa20.92■□□□□ 0.94
VPS25-201ENST00000253794 PTPRTO14522 1441 aa20.9■□□□□ 0.94
VPS25-201ENST00000253794 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.94
VPS25-201ENST00000253794 CEBPAP49715 358 aaPredicted RBP20.88■□□□□ 0.93
VPS25-201ENST00000253794 PKD2Q13563 968 aa20.88■□□□□ 0.93
VPS25-201ENST00000253794 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
VPS25-201ENST00000253794 SYNMO15061 1565 aa20.85■□□□□ 0.93
VPS25-201ENST00000253794 TNRQ92752 1358 aa20.85■□□□□ 0.93
VPS25-201ENST00000253794 TRPM2O94759 1503 aa20.84■□□□□ 0.93
VPS25-201ENST00000253794 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
VPS25-201ENST00000253794 SPHKAPQ2M3C7 1700 aa20.83■□□□□ 0.92
VPS25-201ENST00000253794 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.92
VPS25-201ENST00000253794 SETD1BQ9UPS6 1966 aaKnown RBP20.82■□□□□ 0.92
VPS25-201ENST00000253794 PIK3C2BO00750 1634 aa20.82■□□□□ 0.92
VPS25-201ENST00000253794 NLRP1Q9C000 1473 aa20.81■□□□□ 0.92
VPS25-201ENST00000253794 MYO3AQ8NEV4 1616 aa20.79■□□□□ 0.92
VPS25-201ENST00000253794 SLC52A1Q9NWF4 448 aa20.79■□□□□ 0.92
VPS25-201ENST00000253794 ANKRD30BQ9BXX2 1392 aa20.79■□□□□ 0.92
VPS25-201ENST00000253794 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
VPS25-201ENST00000253794 A2ML1A8K2U0 1454 aa20.75■□□□□ 0.91
VPS25-201ENST00000253794 KDM5AP29375 1690 aaKnown RBP20.75■□□□□ 0.91
VPS25-201ENST00000253794 FOXD1Q16676 465 aa20.75■□□□□ 0.91
VPS25-201ENST00000253794 UHRF1BP1Q6BDS2 1440 aa20.75■□□□□ 0.91
VPS25-201ENST00000253794 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
VPS25-201ENST00000253794 CEP170BQ9Y4F5 1589 aaPredicted RBP20.74■□□□□ 0.91
VPS25-201ENST00000253794 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
VPS25-201ENST00000253794 UGGT1Q9NYU2 1555 aa20.72■□□□□ 0.91
VPS25-201ENST00000253794 IDI1Q13907 227 aa20.72■□□□□ 0.91
VPS25-201ENST00000253794 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
VPS25-201ENST00000253794 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
VPS25-201ENST00000253794 CCDC144AA2RUR9 1427 aa20.71■□□□□ 0.91
VPS25-201ENST00000253794 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
VPS25-201ENST00000253794 ADGRB3O60242 1522 aa20.7■□□□□ 0.9
VPS25-201ENST00000253794 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
VPS25-201ENST00000253794 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
VPS25-201ENST00000253794 TMEM131LA2VDJ0 1609 aa20.67■□□□□ 0.9
VPS25-201ENST00000253794 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
VPS25-201ENST00000253794 ARHGAP23Q9P227 1491 aa20.63■□□□□ 0.89
VPS25-201ENST00000253794 SLIT1O75093 1534 aa20.63■□□□□ 0.89
VPS25-201ENST00000253794 KIF1BO60333 1816 aa20.62■□□□□ 0.89
VPS25-201ENST00000253794 THEMISQ8N1K5 641 aaPredicted RBP20.62■□□□□ 0.89
VPS25-201ENST00000253794 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
VPS25-201ENST00000253794 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
VPS25-201ENST00000253794 ZFYVE9O95405 1425 aa20.58■□□□□ 0.88
VPS25-201ENST00000253794 MYO5BQ9ULV0 1848 aa20.56■□□□□ 0.88
VPS25-201ENST00000253794 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
VPS25-201ENST00000253794 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
VPS25-201ENST00000253794 NEXMIFQ5QGS0 1516 aa20.54■□□□□ 0.88
VPS25-201ENST00000253794 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
VPS25-201ENST00000253794 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
VPS25-201ENST00000253794 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.88
VPS25-201ENST00000253794 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
VPS25-201ENST00000253794 MED14O60244 1454 aa20.51■□□□□ 0.87
VPS25-201ENST00000253794 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
VPS25-201ENST00000253794 SCAF11Q99590 1463 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms