RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ATP10BO94823 1461 aa15.78■□□□□ 0.12
USHBP1-201ENST00000252597 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
USHBP1-201ENST00000252597 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
USHBP1-201ENST00000252597 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
USHBP1-201ENST00000252597 KIF14Q15058 1648 aa15.77■□□□□ 0.11
USHBP1-201ENST00000252597 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.11
USHBP1-201ENST00000252597 DAPK1P53355 1430 aa15.77■□□□□ 0.11
USHBP1-201ENST00000252597 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
USHBP1-201ENST00000252597 PANK3Q9H999 370 aa15.76■□□□□ 0.11
USHBP1-201ENST00000252597 ABCC5O15440 1437 aa15.76■□□□□ 0.11
USHBP1-201ENST00000252597 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
USHBP1-201ENST00000252597 TCERG1O14776 1098 aaKnown RBP15.76■□□□□ 0.11
USHBP1-201ENST00000252597 RPRD2Q5VT52 1461 aaKnown RBP15.75■□□□□ 0.11
USHBP1-201ENST00000252597 NLRP13Q86W25 1043 aa15.75■□□□□ 0.11
USHBP1-201ENST00000252597 DHX29Q7Z478 1369 aaKnown RBP15.74■□□□□ 0.11
USHBP1-201ENST00000252597 ABCA8O94911 1581 aa15.74■□□□□ 0.11
USHBP1-201ENST00000252597 KIF15Q9NS87 1388 aa15.74■□□□□ 0.11
USHBP1-201ENST00000252597 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
USHBP1-201ENST00000252597 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
USHBP1-201ENST00000252597 ERCC6L2Q5T890 1561 aa15.73■□□□□ 0.11
USHBP1-201ENST00000252597 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
USHBP1-201ENST00000252597 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-201ENST00000252597 KTN1Q86UP2 1357 aaKnown RBP15.73■□□□□ 0.11
USHBP1-201ENST00000252597 RALBP1Q15311 655 aa15.72■□□□□ 0.11
USHBP1-201ENST00000252597 CAMSAP2Q08AD1 1489 aa15.71■□□□□ 0.11
USHBP1-201ENST00000252597 BACH2Q9BYV9 841 aa15.71■□□□□ 0.1
USHBP1-201ENST00000252597 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
USHBP1-201ENST00000252597 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
USHBP1-201ENST00000252597 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
USHBP1-201ENST00000252597 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
USHBP1-201ENST00000252597 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-201ENST00000252597 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
USHBP1-201ENST00000252597 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-201ENST00000252597 SPATA31E1Q6ZUB1 1445 aa15.66■□□□□ 0.1
USHBP1-201ENST00000252597 TEX14Q8IWB6 1497 aa15.66■□□□□ 0.1
USHBP1-201ENST00000252597 DNMT1P26358 1616 aaKnown RBP15.65■□□□□ 0.1
USHBP1-201ENST00000252597 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
USHBP1-201ENST00000252597 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
USHBP1-201ENST00000252597 GCC2Q8IWJ2 1684 aa15.64■□□□□ 0.09
USHBP1-201ENST00000252597 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
USHBP1-201ENST00000252597 ROCK1Q13464 1354 aa15.63■□□□□ 0.09
USHBP1-201ENST00000252597 NFKBIBQ15653 356 aa15.63■□□□□ 0.09
USHBP1-201ENST00000252597 CHGAP10645 457 aaKnown RBP15.63■□□□□ 0.09
USHBP1-201ENST00000252597 DDRGK1Q96HY6 314 aa15.62■□□□□ 0.09
USHBP1-201ENST00000252597 TMF1P82094 1093 aa15.62■□□□□ 0.09
USHBP1-201ENST00000252597 ABCC10Q5T3U5 1492 aa15.62■□□□□ 0.09
USHBP1-201ENST00000252597 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
USHBP1-201ENST00000252597 BRD4O60885 1362 aaPredicted RBP15.61■□□□□ 0.09
USHBP1-201ENST00000252597 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
USHBP1-201ENST00000252597 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
USHBP1-201ENST00000252597 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
USHBP1-201ENST00000252597 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
USHBP1-201ENST00000252597 BCL2L13Q9BXK5 485 aa15.6■□□□□ 0.09
USHBP1-201ENST00000252597 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
USHBP1-201ENST00000252597 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
USHBP1-201ENST00000252597 APAF1O14727 1248 aa15.59■□□□□ 0.09
USHBP1-201ENST00000252597 BCAR3O75815 825 aa15.58■□□□□ 0.08
USHBP1-201ENST00000252597 GSE1Q14687 1217 aa15.58■□□□□ 0.08
USHBP1-201ENST00000252597 PDE3BQ13370 1112 aa15.57■□□□□ 0.08
USHBP1-201ENST00000252597 CLUAP1Q96AJ1 413 aa15.57■□□□□ 0.08
USHBP1-201ENST00000252597 PZPP20742 1482 aa15.57■□□□□ 0.08
USHBP1-201ENST00000252597 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.56■□□□□ 0.08
USHBP1-201ENST00000252597 C9orf84Q5VXU9 1444 aa15.56■□□□□ 0.08
USHBP1-201ENST00000252597 ABCC2Q92887 1545 aa15.56■□□□□ 0.08
USHBP1-201ENST00000252597 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
USHBP1-201ENST00000252597 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
USHBP1-201ENST00000252597 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
USHBP1-201ENST00000252597 MS4A1P11836 297 aa15.55■□□□□ 0.08
USHBP1-201ENST00000252597 CCDC144AA2RUR9 1427 aa15.54■□□□□ 0.08
USHBP1-201ENST00000252597 COG6Q9Y2V7 657 aa15.54■□□□□ 0.08
USHBP1-201ENST00000252597 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
USHBP1-201ENST00000252597 GZF1Q9H116 711 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-201ENST00000252597 DISP3Q9P2K9 1392 aa15.52■□□□□ 0.08
USHBP1-201ENST00000252597 FAM161AQ3B820 660 aa15.52■□□□□ 0.07
USHBP1-201ENST00000252597 PANK1Q8TE04 598 aa15.52■□□□□ 0.07
USHBP1-201ENST00000252597 BCORL1Q5H9F3 1711 aa15.52■□□□□ 0.07
USHBP1-201ENST00000252597 TTC37Q6PGP7 1564 aa15.51■□□□□ 0.07
USHBP1-201ENST00000252597 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
USHBP1-201ENST00000252597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
USHBP1-201ENST00000252597 PER1O15534 1290 aaPredicted RBP15.5■□□□□ 0.07
USHBP1-201ENST00000252597 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
USHBP1-201ENST00000252597 CENPQQ7L2Z9 268 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-201ENST00000252597 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 USP35Q9P2H5 1018 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 SAMD9LQ8IVG5 1584 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
USHBP1-201ENST00000252597 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
USHBP1-201ENST00000252597 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
USHBP1-201ENST00000252597 ZCCHC11Q5TAX3 1644 aaKnown RBP15.46■□□□□ 0.07
USHBP1-201ENST00000252597 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
USHBP1-201ENST00000252597 PREX2Q70Z35 1606 aa15.46■□□□□ 0.06
USHBP1-201ENST00000252597 SAFB2Q14151 953 aaKnown RBP eCLIP15.45■□□□□ 0.06
USHBP1-201ENST00000252597 EFCAB2Q5VUJ9 269 aa15.45■□□□□ 0.06
USHBP1-201ENST00000252597 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
USHBP1-201ENST00000252597 NUTM2DQ5VT03 806 aaPredicted RBP15.45■□□□□ 0.06
USHBP1-201ENST00000252597 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms