RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 ZNF644Q9H582 1327 aaPredicted RBP12.68□□□□□ -0.38
VIL1-201ENST00000248444 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
VIL1-201ENST00000248444 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
VIL1-201ENST00000248444 PANK3Q9H999 370 aa12.68□□□□□ -0.38
VIL1-201ENST00000248444 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
VIL1-201ENST00000248444 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
VIL1-201ENST00000248444 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
VIL1-201ENST00000248444 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
VIL1-201ENST00000248444 ARHGAP5Q13017 1502 aa12.66□□□□□ -0.38
VIL1-201ENST00000248444 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
VIL1-201ENST00000248444 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
VIL1-201ENST00000248444 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
VIL1-201ENST00000248444 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
VIL1-201ENST00000248444 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
VIL1-201ENST00000248444 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
VIL1-201ENST00000248444 HSCBQ8IWL3 235 aa12.65□□□□□ -0.38
VIL1-201ENST00000248444 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
VIL1-201ENST00000248444 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
VIL1-201ENST00000248444 KIF15Q9NS87 1388 aa12.64□□□□□ -0.39
VIL1-201ENST00000248444 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
VIL1-201ENST00000248444 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
VIL1-201ENST00000248444 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
VIL1-201ENST00000248444 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 AFAP1Q8N556 730 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
VIL1-201ENST00000248444 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
VIL1-201ENST00000248444 TEFQ10587 303 aa12.62□□□□□ -0.39
VIL1-201ENST00000248444 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
VIL1-201ENST00000248444 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
VIL1-201ENST00000248444 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
VIL1-201ENST00000248444 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
VIL1-201ENST00000248444 HMMRO75330 724 aa12.61□□□□□ -0.39
VIL1-201ENST00000248444 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
VIL1-201ENST00000248444 CUX1P39880 1505 aa12.59□□□□□ -0.39
VIL1-201ENST00000248444 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
VIL1-201ENST00000248444 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
VIL1-201ENST00000248444 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
VIL1-201ENST00000248444 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
VIL1-201ENST00000248444 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.39
VIL1-201ENST00000248444 USP47Q96K76 1375 aa12.58□□□□□ -0.4
VIL1-201ENST00000248444 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
VIL1-201ENST00000248444 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
VIL1-201ENST00000248444 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
VIL1-201ENST00000248444 CFTRP13569 1480 aa12.57□□□□□ -0.4
VIL1-201ENST00000248444 GOLGA6L6A8MZA4 724 aa12.57□□□□□ -0.4
VIL1-201ENST00000248444 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
VIL1-201ENST00000248444 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
VIL1-201ENST00000248444 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
VIL1-201ENST00000248444 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
VIL1-201ENST00000248444 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
VIL1-201ENST00000248444 HSP90B1P14625 803 aaKnown RBP12.56□□□□□ -0.4
VIL1-201ENST00000248444 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
VIL1-201ENST00000248444 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
VIL1-201ENST00000248444 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
VIL1-201ENST00000248444 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
VIL1-201ENST00000248444 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
VIL1-201ENST00000248444 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
VIL1-201ENST00000248444 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
VIL1-201ENST00000248444 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
VIL1-201ENST00000248444 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
VIL1-201ENST00000248444 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
VIL1-201ENST00000248444 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
VIL1-201ENST00000248444 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
VIL1-201ENST00000248444 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.4
VIL1-201ENST00000248444 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
VIL1-201ENST00000248444 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
VIL1-201ENST00000248444 FYCO1Q9BQS8 1478 aa12.52□□□□□ -0.41
VIL1-201ENST00000248444 RAPGEF3O95398 923 aa12.51□□□□□ -0.41
VIL1-201ENST00000248444 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
VIL1-201ENST00000248444 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
VIL1-201ENST00000248444 NLRP6P59044 892 aa12.51□□□□□ -0.41
VIL1-201ENST00000248444 LRRC9Q6ZRR7 1453 aa12.5□□□□□ -0.41
VIL1-201ENST00000248444 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
VIL1-201ENST00000248444 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
VIL1-201ENST00000248444 KIF21BO75037 1637 aa12.5□□□□□ -0.41
VIL1-201ENST00000248444 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
VIL1-201ENST00000248444 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
VIL1-201ENST00000248444 NUTM2BA6NNL0 878 aaPredicted RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 NUTM2EB1AL46 878 aaPredicted RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 NUTM2AQ8IVF1 878 aaPredicted RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 HMOX1P09601 288 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 RIPK4P57078 832 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
VIL1-201ENST00000248444 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
VIL1-201ENST00000248444 PIP4K2BP78356 416 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 NRDCO43847 1150 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
VIL1-201ENST00000248444 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms