RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 KIAA1211Q6ZU35 1233 aa19.26■□□□□ 0.67
HOXC12-201ENST00000243103 KDM6BO15054 1643 aa19.26■□□□□ 0.67
HOXC12-201ENST00000243103 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
HOXC12-201ENST00000243103 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
HOXC12-201ENST00000243103 NUTM2DQ5VT03 806 aaPredicted RBP19.24■□□□□ 0.67
HOXC12-201ENST00000243103 ESPNB1AK53 854 aa19.24■□□□□ 0.67
HOXC12-201ENST00000243103 CLUAP1Q96AJ1 413 aa19.23■□□□□ 0.67
HOXC12-201ENST00000243103 R3HCC1Q9Y3T6 440 aaKnown RBP19.23■□□□□ 0.67
HOXC12-201ENST00000243103 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
HOXC12-201ENST00000243103 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
HOXC12-201ENST00000243103 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
HOXC12-201ENST00000243103 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
HOXC12-201ENST00000243103 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
HOXC12-201ENST00000243103 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
HOXC12-201ENST00000243103 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
HOXC12-201ENST00000243103 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
HOXC12-201ENST00000243103 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
HOXC12-201ENST00000243103 TRAK2O60296 914 aa19.2■□□□□ 0.66
HOXC12-201ENST00000243103 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
HOXC12-201ENST00000243103 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
HOXC12-201ENST00000243103 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
HOXC12-201ENST00000243103 COG6Q9Y2V7 657 aa19.18■□□□□ 0.66
HOXC12-201ENST00000243103 BCAR3O75815 825 aa19.18■□□□□ 0.66
HOXC12-201ENST00000243103 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
HOXC12-201ENST00000243103 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
HOXC12-201ENST00000243103 SAFB2Q14151 953 aaKnown RBP eCLIP19.17■□□□□ 0.66
HOXC12-201ENST00000243103 IGSF3O75054 1194 aa19.15■□□□□ 0.66
HOXC12-201ENST00000243103 CLCN1P35523 988 aa19.15■□□□□ 0.66
HOXC12-201ENST00000243103 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
HOXC12-201ENST00000243103 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
HOXC12-201ENST00000243103 PANK3Q9H999 370 aa19.15■□□□□ 0.66
HOXC12-201ENST00000243103 PANK1Q8TE04 598 aa19.15■□□□□ 0.66
HOXC12-201ENST00000243103 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
HOXC12-201ENST00000243103 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.65
HOXC12-201ENST00000243103 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
HOXC12-201ENST00000243103 IGHDP01880 384 aa19.12■□□□□ 0.65
HOXC12-201ENST00000243103 GRPEL1Q9HAV7 217 aa19.12■□□□□ 0.65
HOXC12-201ENST00000243103 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
HOXC12-201ENST00000243103 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
HOXC12-201ENST00000243103 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
HOXC12-201ENST00000243103 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
HOXC12-201ENST00000243103 MSNP26038 577 aaKnown RBP19.11■□□□□ 0.65
HOXC12-201ENST00000243103 FAM177BA6PVY3 158 aa19.1■□□□□ 0.65
HOXC12-201ENST00000243103 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
HOXC12-201ENST00000243103 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
HOXC12-201ENST00000243103 MCM4P33991 863 aa19.1■□□□□ 0.65
HOXC12-201ENST00000243103 TBC1D2Q9BYX2 928 aa19.1■□□□□ 0.65
HOXC12-201ENST00000243103 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
HOXC12-201ENST00000243103 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
HOXC12-201ENST00000243103 ANP32BQ92688 251 aaKnown RBP19.09■□□□□ 0.65
HOXC12-201ENST00000243103 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
HOXC12-201ENST00000243103 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.65
HOXC12-201ENST00000243103 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.65
HOXC12-201ENST00000243103 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
HOXC12-201ENST00000243103 FOXD4L5Q5VV16 416 aaPredicted RBP19.08■□□□□ 0.64
HOXC12-201ENST00000243103 FOXD4L4Q8WXT5 416 aaPredicted RBP19.08■□□□□ 0.64
HOXC12-201ENST00000243103 TSC1Q92574 1164 aa19.08■□□□□ 0.64
HOXC12-201ENST00000243103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.64
HOXC12-201ENST00000243103 PDE4CQ08493 712 aa19.07■□□□□ 0.64
HOXC12-201ENST00000243103 AAMPQ13685 434 aa19.07■□□□□ 0.64
HOXC12-201ENST00000243103 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
HOXC12-201ENST00000243103 DENND4BO75064 1496 aaPredicted RBP19.07■□□□□ 0.64
HOXC12-201ENST00000243103 PLCD3Q8N3E9 789 aa19.07■□□□□ 0.64
HOXC12-201ENST00000243103 EPRSP07814 1512 aaKnown RBP19.06■□□□□ 0.64
HOXC12-201ENST00000243103 VGLL3A8MV65 326 aa19.06■□□□□ 0.64
HOXC12-201ENST00000243103 ABCC5O15440 1437 aa19.06■□□□□ 0.64
HOXC12-201ENST00000243103 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
HOXC12-201ENST00000243103 BBXQ8WY36 941 aaPredicted RBP19.04■□□□□ 0.64
HOXC12-201ENST00000243103 RALBP1Q15311 655 aa19.04■□□□□ 0.64
HOXC12-201ENST00000243103 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
HOXC12-201ENST00000243103 SPATA31E1Q6ZUB1 1445 aa19.03■□□□□ 0.64
HOXC12-201ENST00000243103 MRE11P49959 708 aa19.02■□□□□ 0.64
HOXC12-201ENST00000243103 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
HOXC12-201ENST00000243103 GAS2L3Q86XJ1 694 aa19.02■□□□□ 0.64
HOXC12-201ENST00000243103 DAPK1P53355 1430 aa19.02■□□□□ 0.64
HOXC12-201ENST00000243103 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
HOXC12-201ENST00000243103 FOXD4L6Q3SYB3 417 aaPredicted RBP19.01■□□□□ 0.63
HOXC12-201ENST00000243103 FOXD4L3Q6VB84 417 aaPredicted RBP19.01■□□□□ 0.63
HOXC12-201ENST00000243103 CHMP4BQ9H444 224 aaKnown RBP19.01■□□□□ 0.63
HOXC12-201ENST00000243103 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
HOXC12-201ENST00000243103 SLC24A1O60721 1099 aa19■□□□□ 0.63
HOXC12-201ENST00000243103 TNNQ9UQP3 1299 aa19■□□□□ 0.63
HOXC12-201ENST00000243103 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
HOXC12-201ENST00000243103 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
HOXC12-201ENST00000243103 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
HOXC12-201ENST00000243103 CBX1P83916 185 aa18.98■□□□□ 0.63
HOXC12-201ENST00000243103 BRD4O60885 1362 aaPredicted RBP18.98■□□□□ 0.63
HOXC12-201ENST00000243103 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 APAF1O14727 1248 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 KNSTRNQ9Y448 316 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 UQCRHLA0A096LP55 91 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 UQCRHP07919 91 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 RNF214Q8ND24 703 aa18.97■□□□□ 0.63
HOXC12-201ENST00000243103 FGD1P98174 961 aa18.96■□□□□ 0.63
HOXC12-201ENST00000243103 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
HOXC12-201ENST00000243103 PTMAP06454 111 aaKnown RBP18.95■□□□□ 0.62
HOXC12-201ENST00000243103 ANKRD50Q9ULJ7 1429 aa18.95■□□□□ 0.62
HOXC12-201ENST00000243103 KDM2BQ8NHM5 1336 aa18.95■□□□□ 0.62
HOXC12-201ENST00000243103 GOLGA2Q08379 1002 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms