RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 KDM5DQ9BY66 1539 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 MTUS2Q5JR59 1369 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 KIDINS220Q9ULH0 1771 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 EHBP1L1Q8N3D4 1523 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 GPATCH8Q9UKJ3 1502 aaKnown RBP3.69□□□□□ -1.82
PRKD3-201ENST00000234179 ILDR2Q71H61 639 aa3.69□□□□□ -1.82
PRKD3-201ENST00000234179 CEP162Q5TB80 1403 aa3.68□□□□□ -1.82
PRKD3-201ENST00000234179 NPHP4O75161 1426 aaPredicted RBP3.68□□□□□ -1.82
PRKD3-201ENST00000234179 MIA2Q96PC5 1412 aa3.68□□□□□ -1.82
PRKD3-201ENST00000234179 CCDC141Q6ZP82 1450 aa3.68□□□□□ -1.82
PRKD3-201ENST00000234179 MED1Q15648 1581 aaPredicted RBP3.68□□□□□ -1.82
PRKD3-201ENST00000234179 TSPY4P0CV99 314 aa3.68□□□□□ -1.82
PRKD3-201ENST00000234179 TSPY10P0CW01 314 aa3.68□□□□□ -1.82
PRKD3-201ENST00000234179 CACNB1Q02641 598 aaPredicted RBP3.68□□□□□ -1.82
PRKD3-201ENST00000234179 CDC42BPBQ9Y5S2 1711 aa3.67□□□□□ -1.82
PRKD3-201ENST00000234179 SYCP2Q9BX26 1530 aa3.67□□□□□ -1.82
PRKD3-201ENST00000234179 HDGFP51858 240 aaKnown RBP3.67□□□□□ -1.82
PRKD3-201ENST00000234179 ZC3H13Q5T200 1668 aaKnown RBP3.67□□□□□ -1.82
PRKD3-201ENST00000234179 SIGLEC1Q9BZZ2 1709 aa3.67□□□□□ -1.82
PRKD3-201ENST00000234179 ZNF335Q9H4Z2 1342 aaPredicted RBP3.67□□□□□ -1.82
PRKD3-201ENST00000234179 RNF17Q9BXT8 1623 aaKnown RBP3.67□□□□□ -1.82
PRKD3-201ENST00000234179 NCKAP5LQ9HCH0 1330 aa3.67□□□□□ -1.82
PRKD3-201ENST00000234179 EID1Q9Y6B2 187 aa3.67□□□□□ -1.82
PRKD3-201ENST00000234179 CAMSAP2Q08AD1 1489 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 ARHGEF5Q12774 1597 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 ARHGAP31Q2M1Z3 1444 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 FAM135BQ49AJ0 1406 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 NCOA3Q9Y6Q9 1424 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 WASHC2CQ9Y4E1 1318 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 DNMT1P26358 1616 aaKnown RBP3.66□□□□□ -1.82
PRKD3-201ENST00000234179 DCAF8L1A6NGE4 600 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 GGT6Q6P531 493 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 POLR1AO95602 1720 aaPredicted RBP3.66□□□□□ -1.82
PRKD3-201ENST00000234179 EIF2AK4Q9P2K8 1649 aaKnown RBP3.66□□□□□ -1.82
PRKD3-201ENST00000234179 CDC42BPAQ5VT25 1732 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 ZNF777Q9ULD5 760 aaPredicted RBP3.66□□□□□ -1.82
PRKD3-201ENST00000234179 ABCC3O15438 1527 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 KANK1Q14678 1352 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 NCOA2Q15596 1464 aa3.66□□□□□ -1.82
PRKD3-201ENST00000234179 UGGT1Q9NYU2 1555 aa3.65□□□□□ -1.82
PRKD3-201ENST00000234179 CLTCQ00610 1675 aaKnown RBP3.65□□□□□ -1.82
PRKD3-201ENST00000234179 RANGAP1P46060 587 aaPredicted RBP3.65□□□□□ -1.82
PRKD3-201ENST00000234179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.65□□□□□ -1.82
PRKD3-201ENST00000234179 SUPT6HQ7KZ85 1726 aaKnown RBP3.65□□□□□ -1.82
PRKD3-201ENST00000234179 HSPA1LP34931 641 aa3.65□□□□□ -1.83
PRKD3-201ENST00000234179 MAST1Q9Y2H9 1570 aa3.65□□□□□ -1.83
PRKD3-201ENST00000234179 VWDEQ8N2E2 1590 aa3.65□□□□□ -1.83
PRKD3-201ENST00000234179 MBD5Q9P267 1494 aa3.65□□□□□ -1.83
PRKD3-201ENST00000234179 NKTRP30414 1462 aaKnown RBP3.64□□□□□ -1.83
PRKD3-201ENST00000234179 KIF3BO15066 747 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 SCAF11Q99590 1463 aaKnown RBP3.64□□□□□ -1.83
PRKD3-201ENST00000234179 KDM5AP29375 1690 aaKnown RBP3.64□□□□□ -1.83
PRKD3-201ENST00000234179 MAP3K1Q13233 1512 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 HNRNPMP52272 730 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRKD3-201ENST00000234179 ARHGAP23Q9P227 1491 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 SLIT1O75093 1534 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 NEURL4Q96JN8 1562 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 FGD6Q6ZV73 1430 aa3.64□□□□□ -1.83
PRKD3-201ENST00000234179 ERVK-7P63135 1459 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 IQGAP1P46940 1657 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 MYOM3Q5VTT5 1437 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 LRRC7Q96NW7 1537 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 PIK3R4Q99570 1358 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 ERBINQ96RT1 1412 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 DUOX2Q9NRD8 1548 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 KCNA6P17658 529 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 SLC52A1Q9NWF4 448 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 SPATA31A6Q5VVP1 1343 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 JCADQ9P266 1359 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 TIAM1Q13009 1591 aa3.63□□□□□ -1.83
PRKD3-201ENST00000234179 PIP4K2BP78356 416 aa3.62□□□□□ -1.83
PRKD3-201ENST00000234179 ZNF772Q68DY9 489 aaPredicted RBP3.62□□□□□ -1.83
PRKD3-201ENST00000234179 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.62□□□□□ -1.83
PRKD3-201ENST00000234179 CDK12Q9NYV4 1490 aaPredicted RBP3.62□□□□□ -1.83
PRKD3-201ENST00000234179 MSH6P52701 1360 aa3.62□□□□□ -1.83
PRKD3-201ENST00000234179 LMTK2Q8IWU2 1503 aa3.62□□□□□ -1.83
PRKD3-201ENST00000234179 STAG3Q9UJ98 1225 aa3.61□□□□□ -1.83
PRKD3-201ENST00000234179 RPRD2Q5VT52 1461 aaKnown RBP3.61□□□□□ -1.83
PRKD3-201ENST00000234179 TMEM2Q9UHN6 1383 aa3.61□□□□□ -1.83
PRKD3-201ENST00000234179 TXNDC2Q86VQ3 553 aa3.61□□□□□ -1.83
PRKD3-201ENST00000234179 PRDM15P57071 1507 aaPredicted RBP3.6□□□□□ -1.83
PRKD3-201ENST00000234179 CADPS2Q86UW7 1296 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 EFCAB6Q5THR3 1501 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 ANKRD30AQ9BXX3 1397 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 DCCP43146 1447 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 PTPN23Q9H3S7 1636 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 DIP2AQ14689 1571 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 NWD1Q149M9 1564 aa3.6□□□□□ -1.83
PRKD3-201ENST00000234179 PROSER2Q86WR7 435 aaPredicted RBP3.6□□□□□ -1.83
PRKD3-201ENST00000234179 TBX22Q9Y458 520 aa3.59□□□□□ -1.83
PRKD3-201ENST00000234179 LRRIQ1Q96JM4 1722 aa3.59□□□□□ -1.83
PRKD3-201ENST00000234179 TMEM94Q12767 1356 aa3.59□□□□□ -1.84
PRKD3-201ENST00000234179 PLEKHG1Q9ULL1 1385 aa3.59□□□□□ -1.84
PRKD3-201ENST00000234179 FBXO31Q5XUX0 539 aaPredicted RBP3.59□□□□□ -1.84
PRKD3-201ENST00000234179 KIF15Q9NS87 1388 aa3.58□□□□□ -1.84
PRKD3-201ENST00000234179 VPS8Q8N3P4 1428 aa3.58□□□□□ -1.84
PRKD3-201ENST00000234179 ADGRB3O60242 1522 aa3.58□□□□□ -1.84
PRKD3-201ENST00000234179 ACIN1Q9UKV3 1341 aaKnown RBP3.58□□□□□ -1.84
PRKD3-201ENST00000234179 UBR1Q8IWV7 1749 aa3.58□□□□□ -1.84
PRKD3-201ENST00000234179 CCDC125Q86Z20 511 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms