RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
PCDHB3-201ENST00000231130 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
PCDHB3-201ENST00000231130 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
PCDHB3-201ENST00000231130 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
PCDHB3-201ENST00000231130 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
PCDHB3-201ENST00000231130 KIAA1107Q9UPP5 1409 aa18.43■□□□□ 0.54
PCDHB3-201ENST00000231130 PANK3Q9H999 370 aa18.43■□□□□ 0.54
PCDHB3-201ENST00000231130 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
PCDHB3-201ENST00000231130 PRG4Q92954 1404 aaPredicted RBP18.42■□□□□ 0.54
PCDHB3-201ENST00000231130 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
PCDHB3-201ENST00000231130 PZPP20742 1482 aa18.42■□□□□ 0.54
PCDHB3-201ENST00000231130 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
PCDHB3-201ENST00000231130 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
PCDHB3-201ENST00000231130 PNNQ9H307 717 aaKnown RBP18.4■□□□□ 0.54
PCDHB3-201ENST00000231130 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
PCDHB3-201ENST00000231130 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
PCDHB3-201ENST00000231130 ADAMTS8Q9UP79 889 aa18.4■□□□□ 0.54
PCDHB3-201ENST00000231130 HNRNPMP52272 730 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCDHB3-201ENST00000231130 RRAGDQ9NQL2 400 aaPredicted RBP18.38■□□□□ 0.53
PCDHB3-201ENST00000231130 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
PCDHB3-201ENST00000231130 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCDHB3-201ENST00000231130 ANKRD30AQ9BXX3 1397 aa18.36■□□□□ 0.53
PCDHB3-201ENST00000231130 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
PCDHB3-201ENST00000231130 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
PCDHB3-201ENST00000231130 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
PCDHB3-201ENST00000231130 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
PCDHB3-201ENST00000231130 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
PCDHB3-201ENST00000231130 POGKQ9P215 609 aa18.32■□□□□ 0.52
PCDHB3-201ENST00000231130 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
PCDHB3-201ENST00000231130 KDM5CP41229 1560 aa18.3■□□□□ 0.52
PCDHB3-201ENST00000231130 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
PCDHB3-201ENST00000231130 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
PCDHB3-201ENST00000231130 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
PCDHB3-201ENST00000231130 C8orf34Q49A92 452 aa18.29■□□□□ 0.52
PCDHB3-201ENST00000231130 IQGAP2Q13576 1575 aa18.29■□□□□ 0.52
PCDHB3-201ENST00000231130 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
PCDHB3-201ENST00000231130 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
PCDHB3-201ENST00000231130 PLEKHD1A6NEE1 506 aa18.28■□□□□ 0.52
PCDHB3-201ENST00000231130 DNMT1P26358 1616 aaKnown RBP18.27■□□□□ 0.52
PCDHB3-201ENST00000231130 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
PCDHB3-201ENST00000231130 MBD5Q9P267 1494 aa18.27■□□□□ 0.52
PCDHB3-201ENST00000231130 BCAR3O75815 825 aa18.27■□□□□ 0.52
PCDHB3-201ENST00000231130 WDR62O43379 1518 aa18.27■□□□□ 0.52
PCDHB3-201ENST00000231130 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
PCDHB3-201ENST00000231130 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
PCDHB3-201ENST00000231130 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
PCDHB3-201ENST00000231130 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
PCDHB3-201ENST00000231130 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
PCDHB3-201ENST00000231130 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
PCDHB3-201ENST00000231130 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
PCDHB3-201ENST00000231130 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
PCDHB3-201ENST00000231130 TMF1P82094 1093 aa18.24■□□□□ 0.51
PCDHB3-201ENST00000231130 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
PCDHB3-201ENST00000231130 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
PCDHB3-201ENST00000231130 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 KIF14Q15058 1648 aa18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 APAF1O14727 1248 aa18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 L1TD1Q5T7N2 865 aaKnown RBP18.22■□□□□ 0.51
PCDHB3-201ENST00000231130 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.51
PCDHB3-201ENST00000231130 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
PCDHB3-201ENST00000231130 SEC24BO95487 1268 aa18.21■□□□□ 0.5
PCDHB3-201ENST00000231130 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.5
PCDHB3-201ENST00000231130 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
PCDHB3-201ENST00000231130 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
PCDHB3-201ENST00000231130 TROQ12816 1431 aaPredicted RBP18.19■□□□□ 0.5
PCDHB3-201ENST00000231130 PPP2R1AP30153 589 aa18.19■□□□□ 0.5
PCDHB3-201ENST00000231130 IGHDP01880 384 aa18.18■□□□□ 0.5
PCDHB3-201ENST00000231130 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
PCDHB3-201ENST00000231130 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
PCDHB3-201ENST00000231130 PANK1Q8TE04 598 aa18.17■□□□□ 0.5
PCDHB3-201ENST00000231130 TESK2Q96S53 571 aa18.17■□□□□ 0.5
PCDHB3-201ENST00000231130 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
PCDHB3-201ENST00000231130 C9orf84Q5VXU9 1444 aa18.16■□□□□ 0.5
PCDHB3-201ENST00000231130 ARID3AQ99856 593 aa18.16■□□□□ 0.5
PCDHB3-201ENST00000231130 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
PCDHB3-201ENST00000231130 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
PCDHB3-201ENST00000231130 CLUAP1Q96AJ1 413 aa18.13■□□□□ 0.49
PCDHB3-201ENST00000231130 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
PCDHB3-201ENST00000231130 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
PCDHB3-201ENST00000231130 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
PCDHB3-201ENST00000231130 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
PCDHB3-201ENST00000231130 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
PCDHB3-201ENST00000231130 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
PCDHB3-201ENST00000231130 BECN1Q14457 450 aa18.1■□□□□ 0.49
PCDHB3-201ENST00000231130 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
PCDHB3-201ENST00000231130 ERBINQ96RT1 1412 aa18.09■□□□□ 0.49
PCDHB3-201ENST00000231130 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
PCDHB3-201ENST00000231130 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
PCDHB3-201ENST00000231130 PRAG1Q86YV5 1406 aa18.08■□□□□ 0.48
PCDHB3-201ENST00000231130 TRIM44Q96DX7 344 aaPredicted RBP18.08■□□□□ 0.48
PCDHB3-201ENST00000231130 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
PCDHB3-201ENST00000231130 XRCC6P12956 609 aaKnown RBP eCLIP18.07■□□□□ 0.48
PCDHB3-201ENST00000231130 UPF2Q9HAU5 1272 aaKnown RBP18.06■□□□□ 0.48
PCDHB3-201ENST00000231130 TNNQ9UQP3 1299 aa18.06■□□□□ 0.48
PCDHB3-201ENST00000231130 RAPGEF6Q8TEU7 1601 aa18.06■□□□□ 0.48
PCDHB3-201ENST00000231130 CLCN1P35523 988 aa18.05■□□□□ 0.48
PCDHB3-201ENST00000231130 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
PCDHB3-201ENST00000231130 KIAA0556O60303 1618 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms