RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
MCM3-201ENST00000229854 CHD1O14646 1710 aa13.7□□□□□ -0.22
MCM3-201ENST00000229854 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
MCM3-201ENST00000229854 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
MCM3-201ENST00000229854 FOXD1Q16676 465 aa13.68□□□□□ -0.22
MCM3-201ENST00000229854 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
MCM3-201ENST00000229854 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
MCM3-201ENST00000229854 KDM5CP41229 1560 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
MCM3-201ENST00000229854 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 PTPRGP23470 1445 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
MCM3-201ENST00000229854 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
MCM3-201ENST00000229854 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
MCM3-201ENST00000229854 MS4A1P11836 297 aa13.66□□□□□ -0.22
MCM3-201ENST00000229854 MAST1Q9Y2H9 1570 aa13.65□□□□□ -0.22
MCM3-201ENST00000229854 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
MCM3-201ENST00000229854 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
MCM3-201ENST00000229854 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.23
MCM3-201ENST00000229854 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
MCM3-201ENST00000229854 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
MCM3-201ENST00000229854 ANKRD30AQ9BXX3 1397 aa13.63□□□□□ -0.23
MCM3-201ENST00000229854 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
MCM3-201ENST00000229854 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
MCM3-201ENST00000229854 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
MCM3-201ENST00000229854 UNC13BO14795 1591 aa13.62□□□□□ -0.23
MCM3-201ENST00000229854 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
MCM3-201ENST00000229854 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
MCM3-201ENST00000229854 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
MCM3-201ENST00000229854 TTC37Q6PGP7 1564 aa13.6□□□□□ -0.23
MCM3-201ENST00000229854 E9PCH4 1651 aa13.6□□□□□ -0.23
MCM3-201ENST00000229854 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
MCM3-201ENST00000229854 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
MCM3-201ENST00000229854 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
MCM3-201ENST00000229854 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
MCM3-201ENST00000229854 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
MCM3-201ENST00000229854 PLIN1O60240 522 aa13.58□□□□□ -0.24
MCM3-201ENST00000229854 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
MCM3-201ENST00000229854 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
MCM3-201ENST00000229854 GLIPR1L2Q4G1C9 344 aa13.56□□□□□ -0.24
MCM3-201ENST00000229854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.242e-10■■■□□ 17.2
MCM3-201ENST00000229854 IQGAP3Q86VI3 1631 aa13.55□□□□□ -0.24
MCM3-201ENST00000229854 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
MCM3-201ENST00000229854 TRPM1Q7Z4N2 1603 aa13.55□□□□□ -0.24
MCM3-201ENST00000229854 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
MCM3-201ENST00000229854 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
MCM3-201ENST00000229854 LAMC1P11047 1609 aa13.54□□□□□ -0.24
MCM3-201ENST00000229854 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
MCM3-201ENST00000229854 MAGI2Q86UL8 1455 aa13.54□□□□□ -0.24
MCM3-201ENST00000229854 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
MCM3-201ENST00000229854 CRBNQ96SW2 442 aa13.53□□□□□ -0.24
MCM3-201ENST00000229854 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.24
MCM3-201ENST00000229854 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.24
MCM3-201ENST00000229854 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
MCM3-201ENST00000229854 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
MCM3-201ENST00000229854 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
MCM3-201ENST00000229854 FBLN2P98095 1184 aa13.51□□□□□ -0.25
MCM3-201ENST00000229854 PKD2Q13563 968 aa13.5□□□□□ -0.25
MCM3-201ENST00000229854 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
MCM3-201ENST00000229854 ARXQ96QS3 562 aa13.5□□□□□ -0.25
MCM3-201ENST00000229854 USP47Q96K76 1375 aa13.5□□□□□ -0.25
MCM3-201ENST00000229854 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
MCM3-201ENST00000229854 NUP155O75694 1391 aa13.48□□□□□ -0.25
MCM3-201ENST00000229854 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
MCM3-201ENST00000229854 RRAGDQ9NQL2 400 aaPredicted RBP13.48□□□□□ -0.25
MCM3-201ENST00000229854 ZNF777Q9ULD5 760 aaPredicted RBP13.48□□□□□ -0.25
MCM3-201ENST00000229854 UHRF1BP1LA0JNW5 1464 aa13.48□□□□□ -0.25
MCM3-201ENST00000229854 ATP10AO60312 1499 aa13.47□□□□□ -0.25
MCM3-201ENST00000229854 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
MCM3-201ENST00000229854 PLEKHH2Q8IVE3 1493 aa13.46□□□□□ -0.25
MCM3-201ENST00000229854 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
MCM3-201ENST00000229854 POGKQ9P215 609 aa13.46□□□□□ -0.25
MCM3-201ENST00000229854 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
MCM3-201ENST00000229854 PLA2R1Q13018 1463 aa13.46□□□□□ -0.25
MCM3-201ENST00000229854 RGS3P49796 1198 aa13.45□□□□□ -0.26
MCM3-201ENST00000229854 RSPH4AQ5TD94 716 aa13.45□□□□□ -0.26
MCM3-201ENST00000229854 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
MCM3-201ENST00000229854 ABCC1P33527 1531 aa13.45□□□□□ -0.26
MCM3-201ENST00000229854 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
MCM3-201ENST00000229854 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
MCM3-201ENST00000229854 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
MCM3-201ENST00000229854 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
MCM3-201ENST00000229854 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
MCM3-201ENST00000229854 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
MCM3-201ENST00000229854 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
MCM3-201ENST00000229854 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
MCM3-201ENST00000229854 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
MCM3-201ENST00000229854 DEPDC5O75140 1603 aa13.43□□□□□ -0.26
MCM3-201ENST00000229854 EIF2AK4Q9P2K8 1649 aaKnown RBP13.43□□□□□ -0.26
MCM3-201ENST00000229854 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
MCM3-201ENST00000229854 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
MCM3-201ENST00000229854 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
MCM3-201ENST00000229854 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
MCM3-201ENST00000229854 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
MCM3-201ENST00000229854 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
MCM3-201ENST00000229854 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
MCM3-201ENST00000229854 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
MCM3-201ENST00000229854 RALBP1Q15311 655 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms