RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
PRKAB1-201ENST00000229328 ADGRL1O94910 1474 aa20.19■□□□□ 0.82
PRKAB1-201ENST00000229328 SCAPERQ9BY12 1400 aa20.19■□□□□ 0.82
PRKAB1-201ENST00000229328 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
PRKAB1-201ENST00000229328 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
PRKAB1-201ENST00000229328 CCER2I3L3R5 266 aa20.18■□□□□ 0.82
PRKAB1-201ENST00000229328 USP47Q96K76 1375 aa20.16■□□□□ 0.82
PRKAB1-201ENST00000229328 INO80Q9ULG1 1556 aaPredicted RBP20.16■□□□□ 0.82
PRKAB1-201ENST00000229328 ATP7AQ04656 1500 aa20.15■□□□□ 0.82
PRKAB1-201ENST00000229328 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
PRKAB1-201ENST00000229328 KIF7Q2M1P5 1343 aa20.14■□□□□ 0.82
PRKAB1-201ENST00000229328 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
PRKAB1-201ENST00000229328 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
PRKAB1-201ENST00000229328 KDM5CP41229 1560 aa20.13■□□□□ 0.81
PRKAB1-201ENST00000229328 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
PRKAB1-201ENST00000229328 BCORL1Q5H9F3 1711 aa20.1■□□□□ 0.81
PRKAB1-201ENST00000229328 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
PRKAB1-201ENST00000229328 ATP10AO60312 1499 aa20.1■□□□□ 0.81
PRKAB1-201ENST00000229328 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
PRKAB1-201ENST00000229328 CD109Q6YHK3 1445 aa20.09■□□□□ 0.81
PRKAB1-201ENST00000229328 A2MP01023 1474 aa20.08■□□□□ 0.8
PRKAB1-201ENST00000229328 DEPDC5O75140 1603 aa20.08■□□□□ 0.8
PRKAB1-201ENST00000229328 E9PCH4 1651 aa20.07■□□□□ 0.8
PRKAB1-201ENST00000229328 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
PRKAB1-201ENST00000229328 DHX29Q7Z478 1369 aaKnown RBP20.06■□□□□ 0.8
PRKAB1-201ENST00000229328 KIF3BO15066 747 aa20.06■□□□□ 0.8
PRKAB1-201ENST00000229328 KIDINS220Q9ULH0 1771 aa20.05■□□□□ 0.8
PRKAB1-201ENST00000229328 ROCK2O75116 1388 aaKnown RBP20.03■□□□□ 0.8
PRKAB1-201ENST00000229328 ZNF518AQ6AHZ1 1483 aa20.03■□□□□ 0.8
PRKAB1-201ENST00000229328 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
PRKAB1-201ENST00000229328 ST20-MTHFSA0A0A6YYL1 179 aa20.01■□□□□ 0.79
PRKAB1-201ENST00000229328 NBPF1Q3BBV0 1214 aa20.01■□□□□ 0.79
PRKAB1-201ENST00000229328 POLR3GLQ9BT43 218 aa20.01■□□□□ 0.79
PRKAB1-201ENST00000229328 VWDEQ8N2E2 1590 aa20.01■□□□□ 0.79
PRKAB1-201ENST00000229328 MROH1Q8NDA8 1641 aa20■□□□□ 0.79
PRKAB1-201ENST00000229328 EIF2AK4Q9P2K8 1649 aaKnown RBP19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 PRKRIP1Q9H875 184 aaPredicted RBP19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 POGZQ7Z3K3 1410 aa19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 CFAP74Q9C0B2 1584 aa19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 KANK1Q14678 1352 aa19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 TET3O43151 1660 aa19.99■□□□□ 0.79
PRKAB1-201ENST00000229328 PTPRTO14522 1441 aa19.98■□□□□ 0.79
PRKAB1-201ENST00000229328 TRPM2O94759 1503 aa19.98■□□□□ 0.79
PRKAB1-201ENST00000229328 PRDM15P57071 1507 aaPredicted RBP19.98■□□□□ 0.79
PRKAB1-201ENST00000229328 CCDC184Q52MB2 194 aa19.97■□□□□ 0.79
PRKAB1-201ENST00000229328 SPHKAPQ2M3C7 1700 aa19.97■□□□□ 0.79
PRKAB1-201ENST00000229328 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
PRKAB1-201ENST00000229328 CLTCL1P53675 1640 aa19.95■□□□□ 0.78
PRKAB1-201ENST00000229328 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
PRKAB1-201ENST00000229328 MLH3Q9UHC1 1453 aa19.93■□□□□ 0.78
PRKAB1-201ENST00000229328 RAPGEF3O95398 923 aa19.92■□□□□ 0.78
PRKAB1-201ENST00000229328 FRMPD1Q5SYB0 1578 aa19.92■□□□□ 0.78
PRKAB1-201ENST00000229328 CEP152O94986 1710 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 HECW2Q9P2P5 1572 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 NEO1Q92859 1461 aa19.91■□□□□ 0.78
PRKAB1-201ENST00000229328 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
PRKAB1-201ENST00000229328 EFCAB6Q5THR3 1501 aa19.88■□□□□ 0.77
PRKAB1-201ENST00000229328 LAMC1P11047 1609 aa19.88■□□□□ 0.77
PRKAB1-201ENST00000229328 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
PRKAB1-201ENST00000229328 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
PRKAB1-201ENST00000229328 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
PRKAB1-201ENST00000229328 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
PRKAB1-201ENST00000229328 MAP3K4Q9Y6R4 1608 aa19.86■□□□□ 0.77
PRKAB1-201ENST00000229328 MADDQ8WXG6 1647 aa19.86■□□□□ 0.77
PRKAB1-201ENST00000229328 GGT6Q6P531 493 aa19.85■□□□□ 0.77
PRKAB1-201ENST00000229328 LMTK2Q8IWU2 1503 aa19.85■□□□□ 0.77
PRKAB1-201ENST00000229328 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
PRKAB1-201ENST00000229328 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
PRKAB1-201ENST00000229328 TESK2Q96S53 571 aa19.84■□□□□ 0.77
PRKAB1-201ENST00000229328 SUPT16HQ9Y5B9 1047 aaKnown RBP19.81■□□□□ 0.76
PRKAB1-201ENST00000229328 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
PRKAB1-201ENST00000229328 GLI2P10070 1586 aa19.81■□□□□ 0.76
PRKAB1-201ENST00000229328 DISP3Q9P2K9 1392 aa19.8■□□□□ 0.76
PRKAB1-201ENST00000229328 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
PRKAB1-201ENST00000229328 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
PRKAB1-201ENST00000229328 NPATQ14207 1427 aa19.79■□□□□ 0.76
PRKAB1-201ENST00000229328 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
PRKAB1-201ENST00000229328 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
PRKAB1-201ENST00000229328 NEURL4Q96JN8 1562 aa19.77■□□□□ 0.76
PRKAB1-201ENST00000229328 STAC3Q96MF2 364 aa19.77■□□□□ 0.76
PRKAB1-201ENST00000229328 YEATS2Q9ULM3 1422 aa19.77■□□□□ 0.75
PRKAB1-201ENST00000229328 WASHC2CQ9Y4E1 1318 aa19.76■□□□□ 0.75
PRKAB1-201ENST00000229328 ABCC3O15438 1527 aa19.76■□□□□ 0.75
PRKAB1-201ENST00000229328 MROH2AA6NES4 1674 aa19.75■□□□□ 0.75
PRKAB1-201ENST00000229328 KIF1BO60333 1816 aa19.75■□□□□ 0.75
PRKAB1-201ENST00000229328 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
PRKAB1-201ENST00000229328 CFAP65Q6ZU64 1925 aaKnown RBP19.75■□□□□ 0.75
PRKAB1-201ENST00000229328 DIP2BQ9P265 1576 aa19.75■□□□□ 0.75
PRKAB1-201ENST00000229328 ADGRF5Q8IZF2 1346 aa19.74■□□□□ 0.75
PRKAB1-201ENST00000229328 TMF1P82094 1093 aa19.72■□□□□ 0.75
PRKAB1-201ENST00000229328 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
PRKAB1-201ENST00000229328 MYOM2P54296 1465 aa19.71■□□□□ 0.75
PRKAB1-201ENST00000229328 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
PRKAB1-201ENST00000229328 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
PRKAB1-201ENST00000229328 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
PRKAB1-201ENST00000229328 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms