RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.56e-8■■□□□ 11.5
CHMP5-201ENST00000223500 AGLP35573 1532 aa24.41■■□□□ 1.5
CHMP5-201ENST00000223500 DEPDC5O75140 1603 aa24.4■■□□□ 1.5
CHMP5-201ENST00000223500 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
CHMP5-201ENST00000223500 KDM5DQ9BY66 1539 aa24.39■■□□□ 1.5
CHMP5-201ENST00000223500 KANK1Q14678 1352 aa24.39■■□□□ 1.5
CHMP5-201ENST00000223500 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.5
CHMP5-201ENST00000223500 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.49
CHMP5-201ENST00000223500 MPHOSPH9Q99550 1183 aa24.37■■□□□ 1.49
CHMP5-201ENST00000223500 SLC4A1APQ9BWU0 796 aaKnown RBP24.37■■□□□ 1.49
CHMP5-201ENST00000223500 GGT6Q6P531 493 aa24.36■■□□□ 1.49
CHMP5-201ENST00000223500 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
CHMP5-201ENST00000223500 PRDM15P57071 1507 aaPredicted RBP24.34■■□□□ 1.49
CHMP5-201ENST00000223500 PZPP20742 1482 aa24.34■■□□□ 1.49
CHMP5-201ENST00000223500 FAM135AQ9P2D6 1515 aa24.33■■□□□ 1.48
CHMP5-201ENST00000223500 ARID4BQ4LE39 1312 aaPredicted RBP24.32■■□□□ 1.48
CHMP5-201ENST00000223500 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
CHMP5-201ENST00000223500 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
CHMP5-201ENST00000223500 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
CHMP5-201ENST00000223500 PPP6R1Q9UPN7 881 aa24.29■■□□□ 1.48
CHMP5-201ENST00000223500 CLSPNQ9HAW4 1339 aa24.28■■□□□ 1.48
CHMP5-201ENST00000223500 PKD2Q13563 968 aa24.26■■□□□ 1.47
CHMP5-201ENST00000223500 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
CHMP5-201ENST00000223500 TET3O43151 1660 aa24.25■■□□□ 1.47
CHMP5-201ENST00000223500 MLECQ14165 292 aa24.25■■□□□ 1.47
CHMP5-201ENST00000223500 ZC3H13Q5T200 1668 aaKnown RBP24.24■■□□□ 1.47
CHMP5-201ENST00000223500 LMTK2Q8IWU2 1503 aa24.24■■□□□ 1.47
CHMP5-201ENST00000223500 CEP152O94986 1710 aa24.23■■□□□ 1.47
CHMP5-201ENST00000223500 ABCC3O15438 1527 aa24.22■■□□□ 1.47
CHMP5-201ENST00000223500 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
CHMP5-201ENST00000223500 FOXD1Q16676 465 aa24.19■■□□□ 1.46
CHMP5-201ENST00000223500 EFCAB6Q5THR3 1501 aa24.17■■□□□ 1.46
CHMP5-201ENST00000223500 E9PCH4 1651 aa24.16■■□□□ 1.46
CHMP5-201ENST00000223500 CAMSAP1Q5T5Y3 1602 aa24.15■■□□□ 1.46
CHMP5-201ENST00000223500 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.46
CHMP5-201ENST00000223500 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
CHMP5-201ENST00000223500 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
CHMP5-201ENST00000223500 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
CHMP5-201ENST00000223500 ARHGAP31Q2M1Z3 1444 aa24.12■■□□□ 1.45
CHMP5-201ENST00000223500 CFAP65Q6ZU64 1925 aaKnown RBP24.1■■□□□ 1.45
CHMP5-201ENST00000223500 FER1L4A9Z1Z3 1794 aa24.09■■□□□ 1.45
CHMP5-201ENST00000223500 NPATQ14207 1427 aa24.08■■□□□ 1.45
CHMP5-201ENST00000223500 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
CHMP5-201ENST00000223500 SPHKAPQ2M3C7 1700 aa24.07■■□□□ 1.44
CHMP5-201ENST00000223500 MROH2AA6NES4 1674 aa24.06■■□□□ 1.44
CHMP5-201ENST00000223500 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
CHMP5-201ENST00000223500 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
CHMP5-201ENST00000223500 PTPRTO14522 1441 aa24.05■■□□□ 1.44
CHMP5-201ENST00000223500 ZMYM3Q14202 1370 aa24.04■■□□□ 1.44
CHMP5-201ENST00000223500 TRPM2O94759 1503 aa24.02■■□□□ 1.44
CHMP5-201ENST00000223500 PLA2R1Q13018 1463 aa24.02■■□□□ 1.44
CHMP5-201ENST00000223500 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
CHMP5-201ENST00000223500 ADAMTSL3P82987 1691 aa24.02■■□□□ 1.44
CHMP5-201ENST00000223500 PREX1Q8TCU6 1659 aa24■■□□□ 1.43
CHMP5-201ENST00000223500 MADDQ8WXG6 1647 aa23.99■■□□□ 1.43
CHMP5-201ENST00000223500 NOS1P29475 1434 aa23.98■■□□□ 1.43
CHMP5-201ENST00000223500 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
CHMP5-201ENST00000223500 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
CHMP5-201ENST00000223500 ERVK-7P63135 1459 aa23.96■■□□□ 1.43
CHMP5-201ENST00000223500 FBXO31Q5XUX0 539 aaPredicted RBP23.94■■□□□ 1.42
CHMP5-201ENST00000223500 TONSLQ96HA7 1378 aa23.94■■□□□ 1.42
CHMP5-201ENST00000223500 C3P01024 1663 aa23.94■■□□□ 1.42
CHMP5-201ENST00000223500 SPATA31D1Q6ZQQ2 1576 aa23.93■■□□□ 1.42
CHMP5-201ENST00000223500 CLTCL1P53675 1640 aa23.93■■□□□ 1.42
CHMP5-201ENST00000223500 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
CHMP5-201ENST00000223500 SYNMO15061 1565 aa23.91■■□□□ 1.42
CHMP5-201ENST00000223500 KIF1BO60333 1816 aa23.91■■□□□ 1.42
CHMP5-201ENST00000223500 CEBPAP49715 358 aaPredicted RBP23.88■■□□□ 1.41
CHMP5-201ENST00000223500 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
CHMP5-201ENST00000223500 UGGT1Q9NYU2 1555 aa23.88■■□□□ 1.41
CHMP5-201ENST00000223500 TNRQ92752 1358 aa23.87■■□□□ 1.41
CHMP5-201ENST00000223500 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
CHMP5-201ENST00000223500 IDI1Q13907 227 aa23.85■■□□□ 1.41
CHMP5-201ENST00000223500 NEURL4Q96JN8 1562 aa23.83■■□□□ 1.41
CHMP5-201ENST00000223500 CHGAP10645 457 aaKnown RBP23.83■■□□□ 1.41
CHMP5-201ENST00000223500 L3MBTL2Q969R5 705 aa23.82■■□□□ 1.4
CHMP5-201ENST00000223500 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
CHMP5-201ENST00000223500 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
CHMP5-201ENST00000223500 PTPRMP28827 1452 aa23.81■■□□□ 1.4
CHMP5-201ENST00000223500 SETD1BQ9UPS6 1966 aaKnown RBP23.81■■□□□ 1.4
CHMP5-201ENST00000223500 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
CHMP5-201ENST00000223500 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
CHMP5-201ENST00000223500 NLRP1Q9C000 1473 aa23.78■■□□□ 1.4
CHMP5-201ENST00000223500 ZNF326Q5BKZ1 582 aaKnown RBP23.77■■□□□ 1.4
CHMP5-201ENST00000223500 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
CHMP5-201ENST00000223500 DCAF11Q8TEB1 546 aa23.75■■□□□ 1.39
CHMP5-201ENST00000223500 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
CHMP5-201ENST00000223500 KDM4FA0A1W2PPD8 638 aa23.75■■□□□ 1.39
CHMP5-201ENST00000223500 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
CHMP5-201ENST00000223500 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
CHMP5-201ENST00000223500 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
CHMP5-201ENST00000223500 KDM5AP29375 1690 aaKnown RBP23.73■■□□□ 1.39
CHMP5-201ENST00000223500 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
CHMP5-201ENST00000223500 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.39
CHMP5-201ENST00000223500 A2ML1A8K2U0 1454 aa23.69■■□□□ 1.38
CHMP5-201ENST00000223500 UBR1Q8IWV7 1749 aa23.68■■□□□ 1.38
CHMP5-201ENST00000223500 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
CHMP5-201ENST00000223500 PPLO60437 1756 aa23.66■■□□□ 1.38
CHMP5-201ENST00000223500 CEP170BQ9Y4F5 1589 aaPredicted RBP23.64■■□□□ 1.38
CHMP5-201ENST00000223500 UHRF1BP1Q6BDS2 1440 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms