RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
PLOD3-201ENST00000223127 CD109Q6YHK3 1445 aa18.16■□□□□ 0.5
PLOD3-201ENST00000223127 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
PLOD3-201ENST00000223127 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
PLOD3-201ENST00000223127 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
PLOD3-201ENST00000223127 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
PLOD3-201ENST00000223127 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
PLOD3-201ENST00000223127 UNC13BO14795 1591 aa18.12■□□□□ 0.49
PLOD3-201ENST00000223127 MSH5O43196 834 aa18.11■□□□□ 0.49
PLOD3-201ENST00000223127 KIF3BO15066 747 aa18.11■□□□□ 0.49
PLOD3-201ENST00000223127 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
PLOD3-201ENST00000223127 ANP32CO43423 234 aa18.1■□□□□ 0.49
PLOD3-201ENST00000223127 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
PLOD3-201ENST00000223127 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
PLOD3-201ENST00000223127 C11orf95C9JLR9 678 aaPredicted RBP18.07■□□□□ 0.48
PLOD3-201ENST00000223127 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
PLOD3-201ENST00000223127 IQGAP3Q86VI3 1631 aa18.07■□□□□ 0.48
PLOD3-201ENST00000223127 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
PLOD3-201ENST00000223127 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
PLOD3-201ENST00000223127 MAGI2Q86UL8 1455 aa18.04■□□□□ 0.48
PLOD3-201ENST00000223127 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
PLOD3-201ENST00000223127 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
PLOD3-201ENST00000223127 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
PLOD3-201ENST00000223127 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
PLOD3-201ENST00000223127 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.48
PLOD3-201ENST00000223127 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.47
PLOD3-201ENST00000223127 CARD11Q9BXL7 1154 aa18.02■□□□□ 0.47
PLOD3-201ENST00000223127 USP47Q96K76 1375 aa18.01■□□□□ 0.47
PLOD3-201ENST00000223127 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
PLOD3-201ENST00000223127 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
PLOD3-201ENST00000223127 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
PLOD3-201ENST00000223127 KANK1Q14678 1352 aa17.99■□□□□ 0.47
PLOD3-201ENST00000223127 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
PLOD3-201ENST00000223127 KIDINS220Q9ULH0 1771 aa17.98■□□□□ 0.47
PLOD3-201ENST00000223127 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
PLOD3-201ENST00000223127 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
PLOD3-201ENST00000223127 GGT6Q6P531 493 aa17.97■□□□□ 0.47
PLOD3-201ENST00000223127 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.47
PLOD3-201ENST00000223127 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
PLOD3-201ENST00000223127 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
PLOD3-201ENST00000223127 A2MP01023 1474 aa17.95■□□□□ 0.46
PLOD3-201ENST00000223127 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
PLOD3-201ENST00000223127 E9PCH4 1651 aa17.94■□□□□ 0.46
PLOD3-201ENST00000223127 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
PLOD3-201ENST00000223127 ATP10AO60312 1499 aa17.92■□□□□ 0.46
PLOD3-201ENST00000223127 NEO1Q92859 1461 aa17.92■□□□□ 0.46
PLOD3-201ENST00000223127 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
PLOD3-201ENST00000223127 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
PLOD3-201ENST00000223127 IRX6P78412 446 aaPredicted RBP17.92■□□□□ 0.46
PLOD3-201ENST00000223127 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
PLOD3-201ENST00000223127 KDM5CP41229 1560 aa17.91■□□□□ 0.46
PLOD3-201ENST00000223127 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
PLOD3-201ENST00000223127 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
PLOD3-201ENST00000223127 MLH3Q9UHC1 1453 aa17.91■□□□□ 0.46
PLOD3-201ENST00000223127 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.46
PLOD3-201ENST00000223127 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
PLOD3-201ENST00000223127 MROH1Q8NDA8 1641 aa17.89■□□□□ 0.45
PLOD3-201ENST00000223127 PRDM15P57071 1507 aaPredicted RBP17.88■□□□□ 0.45
PLOD3-201ENST00000223127 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
PLOD3-201ENST00000223127 TET3O43151 1660 aa17.87■□□□□ 0.45
PLOD3-201ENST00000223127 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
PLOD3-201ENST00000223127 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
PLOD3-201ENST00000223127 PTPRTO14522 1441 aa17.86■□□□□ 0.45
PLOD3-201ENST00000223127 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
PLOD3-201ENST00000223127 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
PLOD3-201ENST00000223127 WASHC2CQ9Y4E1 1318 aa17.86■□□□□ 0.45
PLOD3-201ENST00000223127 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
PLOD3-201ENST00000223127 TRPM2O94759 1503 aa17.85■□□□□ 0.45
PLOD3-201ENST00000223127 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
PLOD3-201ENST00000223127 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
PLOD3-201ENST00000223127 SPHKAPQ2M3C7 1700 aa17.84■□□□□ 0.45
PLOD3-201ENST00000223127 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
PLOD3-201ENST00000223127 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
PLOD3-201ENST00000223127 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
PLOD3-201ENST00000223127 TSPOAP1O95153 1857 aa17.83■□□□□ 0.44
PLOD3-201ENST00000223127 DIP2BQ9P265 1576 aa17.82■□□□□ 0.44
PLOD3-201ENST00000223127 GLI2P10070 1586 aa17.82■□□□□ 0.44
PLOD3-201ENST00000223127 TRPM1Q7Z4N2 1603 aa17.82■□□□□ 0.44
PLOD3-201ENST00000223127 CEP152O94986 1710 aa17.8■□□□□ 0.44
PLOD3-201ENST00000223127 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
PLOD3-201ENST00000223127 PPRC1Q5VV67 1664 aaKnown RBP17.8■□□□□ 0.44
PLOD3-201ENST00000223127 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
PLOD3-201ENST00000223127 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
PLOD3-201ENST00000223127 RICTORQ6R327 1708 aa17.78■□□□□ 0.44
PLOD3-201ENST00000223127 CFAP65Q6ZU64 1925 aaKnown RBP17.78■□□□□ 0.44
PLOD3-201ENST00000223127 DIP2CQ9Y2E4 1556 aa17.78■□□□□ 0.44
PLOD3-201ENST00000223127 NPATQ14207 1427 aa17.78■□□□□ 0.44
PLOD3-201ENST00000223127 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
PLOD3-201ENST00000223127 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
PLOD3-201ENST00000223127 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
PLOD3-201ENST00000223127 GPRASP1Q5JY77 1395 aa17.76■□□□□ 0.43
PLOD3-201ENST00000223127 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-201ENST00000223127 LMTK2Q8IWU2 1503 aa17.74■□□□□ 0.43
PLOD3-201ENST00000223127 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
PLOD3-201ENST00000223127 ABCC3O15438 1527 aa17.73■□□□□ 0.43
PLOD3-201ENST00000223127 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
PLOD3-201ENST00000223127 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
PLOD3-201ENST00000223127 TESK2Q96S53 571 aa17.71■□□□□ 0.43
PLOD3-201ENST00000223127 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
PLOD3-201ENST00000223127 MADDQ8WXG6 1647 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms