RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
PCOLCE-201ENST00000223061 CNTLNQ9NXG0 1405 aa22.29■■□□□ 1.16
PCOLCE-201ENST00000223061 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
PCOLCE-201ENST00000223061 PPP6R1Q9UPN7 881 aa22.28■■□□□ 1.16
PCOLCE-201ENST00000223061 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
PCOLCE-201ENST00000223061 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
PCOLCE-201ENST00000223061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
PCOLCE-201ENST00000223061 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
PCOLCE-201ENST00000223061 CLTCQ00610 1675 aaKnown RBP22.24■■□□□ 1.15
PCOLCE-201ENST00000223061 ZMYM3Q14202 1370 aa22.23■■□□□ 1.15
PCOLCE-201ENST00000223061 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
PCOLCE-201ENST00000223061 MROH1Q8NDA8 1641 aa22.21■■□□□ 1.15
PCOLCE-201ENST00000223061 C3P01024 1663 aa22.19■■□□□ 1.14
PCOLCE-201ENST00000223061 MROH2AA6NES4 1674 aa22.18■■□□□ 1.14
PCOLCE-201ENST00000223061 ABCC3O15438 1527 aa22.18■■□□□ 1.14
PCOLCE-201ENST00000223061 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
PCOLCE-201ENST00000223061 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
PCOLCE-201ENST00000223061 KANK1Q14678 1352 aa22.17■■□□□ 1.14
PCOLCE-201ENST00000223061 DEPDC5O75140 1603 aa22.15■■□□□ 1.14
PCOLCE-201ENST00000223061 NAIPQ13075 1403 aa22.13■■□□□ 1.13
PCOLCE-201ENST00000223061 ZC3H13Q5T200 1668 aaKnown RBP22.12■■□□□ 1.13
PCOLCE-201ENST00000223061 FBXO31Q5XUX0 539 aaPredicted RBP22.11■■□□□ 1.13
PCOLCE-201ENST00000223061 HFM1A2PYH4 1435 aa22.11■■□□□ 1.13
PCOLCE-201ENST00000223061 CEP152O94986 1710 aa22.1■■□□□ 1.13
PCOLCE-201ENST00000223061 NPATQ14207 1427 aa22.1■■□□□ 1.13
PCOLCE-201ENST00000223061 PZPP20742 1482 aa22.1■■□□□ 1.13
PCOLCE-201ENST00000223061 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.13
PCOLCE-201ENST00000223061 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
PCOLCE-201ENST00000223061 CAMSAP1Q5T5Y3 1602 aa22.07■■□□□ 1.12
PCOLCE-201ENST00000223061 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
PCOLCE-201ENST00000223061 UNC13BO14795 1591 aa22.07■■□□□ 1.12
PCOLCE-201ENST00000223061 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
PCOLCE-201ENST00000223061 NUP155O75694 1391 aa22.06■■□□□ 1.12
PCOLCE-201ENST00000223061 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
PCOLCE-201ENST00000223061 TNRQ92752 1358 aa22.04■■□□□ 1.12
PCOLCE-201ENST00000223061 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
PCOLCE-201ENST00000223061 HSPA2P54652 639 aa22.03■■□□□ 1.12
PCOLCE-201ENST00000223061 ARHGAP31Q2M1Z3 1444 aa22.02■■□□□ 1.12
PCOLCE-201ENST00000223061 ERVK-7P63135 1459 aa22.01■■□□□ 1.11
PCOLCE-201ENST00000223061 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
PCOLCE-201ENST00000223061 TRIM52Q96A61 297 aa22■■□□□ 1.11
PCOLCE-201ENST00000223061 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
PCOLCE-201ENST00000223061 MYO3AQ8NEV4 1616 aa21.98■■□□□ 1.11
PCOLCE-201ENST00000223061 IQGAP3Q86VI3 1631 aa21.97■■□□□ 1.11
PCOLCE-201ENST00000223061 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
PCOLCE-201ENST00000223061 TET3O43151 1660 aa21.96■■□□□ 1.11
PCOLCE-201ENST00000223061 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
PCOLCE-201ENST00000223061 CEP170BQ9Y4F5 1589 aaPredicted RBP21.94■■□□□ 1.1
PCOLCE-201ENST00000223061 A2ML1A8K2U0 1454 aa21.92■■□□□ 1.1
PCOLCE-201ENST00000223061 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
PCOLCE-201ENST00000223061 NLRP1Q9C000 1473 aa21.91■■□□□ 1.1
PCOLCE-201ENST00000223061 CFAP65Q6ZU64 1925 aaKnown RBP21.91■■□□□ 1.1
PCOLCE-201ENST00000223061 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
PCOLCE-201ENST00000223061 NOS1P29475 1434 aa21.9■■□□□ 1.1
PCOLCE-201ENST00000223061 ZNF142P52746 1687 aaPredicted RBP21.89■■□□□ 1.1
PCOLCE-201ENST00000223061 E9PCH4 1651 aa21.88■■□□□ 1.09
PCOLCE-201ENST00000223061 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
PCOLCE-201ENST00000223061 SYNMO15061 1565 aa21.87■■□□□ 1.09
PCOLCE-201ENST00000223061 UGGT1Q9NYU2 1555 aa21.85■■□□□ 1.09
PCOLCE-201ENST00000223061 PKD2Q13563 968 aa21.85■■□□□ 1.09
PCOLCE-201ENST00000223061 IDI1Q13907 227 aa21.85■■□□□ 1.09
PCOLCE-201ENST00000223061 THEMISQ8N1K5 641 aaPredicted RBP21.83■■□□□ 1.09
PCOLCE-201ENST00000223061 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.08
PCOLCE-201ENST00000223061 SLC52A1Q9NWF4 448 aa21.82■■□□□ 1.08
PCOLCE-201ENST00000223061 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
PCOLCE-201ENST00000223061 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
PCOLCE-201ENST00000223061 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
PCOLCE-201ENST00000223061 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
PCOLCE-201ENST00000223061 PIK3C2BO00750 1634 aa21.79■■□□□ 1.08
PCOLCE-201ENST00000223061 FOXD1Q16676 465 aa21.79■■□□□ 1.08
PCOLCE-201ENST00000223061 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
PCOLCE-201ENST00000223061 PTPRTO14522 1441 aa21.77■■□□□ 1.08
PCOLCE-201ENST00000223061 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
PCOLCE-201ENST00000223061 UBR1Q8IWV7 1749 aa21.76■■□□□ 1.07
PCOLCE-201ENST00000223061 STRCQ7RTU9 1775 aa21.76■■□□□ 1.07
PCOLCE-201ENST00000223061 HRCP23327 699 aa21.75■■□□□ 1.07
PCOLCE-201ENST00000223061 ADGRB3O60242 1522 aa21.74■■□□□ 1.07
PCOLCE-201ENST00000223061 SPHKAPQ2M3C7 1700 aa21.74■■□□□ 1.07
PCOLCE-201ENST00000223061 ANKLE2Q86XL3 938 aa21.74■■□□□ 1.07
PCOLCE-201ENST00000223061 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
PCOLCE-201ENST00000223061 TRPM2O94759 1503 aa21.72■■□□□ 1.07
PCOLCE-201ENST00000223061 TMEM2Q9UHN6 1383 aa21.71■■□□□ 1.07
PCOLCE-201ENST00000223061 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
PCOLCE-201ENST00000223061 EID1Q9Y6B2 187 aa21.68■■□□□ 1.06
PCOLCE-201ENST00000223061 ARHGAP23Q9P227 1491 aa21.68■■□□□ 1.06
PCOLCE-201ENST00000223061 SLIT1O75093 1534 aa21.68■■□□□ 1.06
PCOLCE-201ENST00000223061 KDM5AP29375 1690 aaKnown RBP21.68■■□□□ 1.06
PCOLCE-201ENST00000223061 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
PCOLCE-201ENST00000223061 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
PCOLCE-201ENST00000223061 LTKP29376 864 aa21.67■■□□□ 1.06
PCOLCE-201ENST00000223061 SCAF11Q99590 1463 aaKnown RBP21.67■■□□□ 1.06
PCOLCE-201ENST00000223061 NEURL4Q96JN8 1562 aa21.66■■□□□ 1.06
PCOLCE-201ENST00000223061 NPHP4O75161 1426 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-201ENST00000223061 POLR1AO95602 1720 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-201ENST00000223061 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-201ENST00000223061 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
PCOLCE-201ENST00000223061 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
PCOLCE-201ENST00000223061 MED14O60244 1454 aa21.61■■□□□ 1.05
PCOLCE-201ENST00000223061 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
PCOLCE-201ENST00000223061 MYO5BQ9ULV0 1848 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms