RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RALGAPBQ86X10 1494 aa41.62■■■■■ 4.25
PABPN1-201ENST00000216727 CFAP74Q9C0B2 1584 aa41.62■■■■■ 4.25
PABPN1-201ENST00000216727 DEPDC5O75140 1603 aa41.61■■■■■ 4.25
PABPN1-201ENST00000216727 CD109Q6YHK3 1445 aa41.59■■■■■ 4.25
PABPN1-201ENST00000216727 CCER2I3L3R5 266 aa41.58■■■■■ 4.25
PABPN1-201ENST00000216727 CCDC7Q96M83 1385 aa41.56■■■■■ 4.24
PABPN1-201ENST00000216727 POLR1AO95602 1720 aaPredicted RBP41.55■■■■■ 4.24
PABPN1-201ENST00000216727 ZNF518AQ6AHZ1 1483 aa41.54■■■■■ 4.24
PABPN1-201ENST00000216727 ZNF326Q5BKZ1 582 aaKnown RBP41.54■■■■■ 4.24
PABPN1-201ENST00000216727 EIF2AK4Q9P2K8 1649 aaKnown RBP41.53■■■■■ 4.24
PABPN1-201ENST00000216727 DHX29Q7Z478 1369 aaKnown RBP41.51■■■■■ 4.24
PABPN1-201ENST00000216727 C11orf95C9JLR9 678 aaPredicted RBP41.51■■■■■ 4.23
PABPN1-201ENST00000216727 DCAF11Q8TEB1 546 aa41.51■■■■■ 4.23
PABPN1-201ENST00000216727 KDM5CP41229 1560 aa41.5■■■■■ 4.23
PABPN1-201ENST00000216727 USP47Q96K76 1375 aa41.5■■■■■ 4.23
PABPN1-201ENST00000216727 KIDINS220Q9ULH0 1771 aa41.47■■■■■ 4.23
PABPN1-201ENST00000216727 VWDEQ8N2E2 1590 aa41.47■■■■■ 4.23
PABPN1-201ENST00000216727 CNTLNQ9NXG0 1405 aa41.46■■■■■ 4.23
PABPN1-201ENST00000216727 E9PCH4 1651 aa41.44■■■■■ 4.22
PABPN1-201ENST00000216727 GTF3C3Q9Y5Q9 886 aa41.44■■■■■ 4.22
PABPN1-201ENST00000216727 POGZQ7Z3K3 1410 aa41.42■■■■■ 4.22
PABPN1-201ENST00000216727 KDM2AQ9Y2K7 1162 aa41.42■■■■■ 4.22
PABPN1-201ENST00000216727 TET3O43151 1660 aa41.41■■■■■ 4.22
PABPN1-201ENST00000216727 KANK1Q14678 1352 aa41.41■■■■■ 4.22
PABPN1-201ENST00000216727 MYT1LQ9UL68 1186 aa41.4■■■■■ 4.22
PABPN1-201ENST00000216727 PRDM15P57071 1507 aaPredicted RBP41.4■■■■■ 4.22
PABPN1-201ENST00000216727 PRAG1Q86YV5 1406 aa41.4■■■■■ 4.22
PABPN1-201ENST00000216727 KIF7Q2M1P5 1343 aa41.4■■■■■ 4.22
PABPN1-201ENST00000216727 A2MP01023 1474 aa41.39■■■■■ 4.22
PABPN1-201ENST00000216727 NEO1Q92859 1461 aa41.38■■■■■ 4.21
PABPN1-201ENST00000216727 PTPRTO14522 1441 aa41.36■■■■■ 4.21
PABPN1-201ENST00000216727 CARD11Q9BXL7 1154 aa41.36■■■■■ 4.21
PABPN1-201ENST00000216727 MLH3Q9UHC1 1453 aa41.36■■■■■ 4.21
PABPN1-201ENST00000216727 TRPM2O94759 1503 aa41.35■■■■■ 4.21
PABPN1-201ENST00000216727 MROH1Q8NDA8 1641 aa41.35■■■■■ 4.21
PABPN1-201ENST00000216727 KIF3BO15066 747 aa41.35■■■■■ 4.21
PABPN1-201ENST00000216727 ARID4BQ4LE39 1312 aaPredicted RBP41.33■■■■■ 4.21
PABPN1-201ENST00000216727 TRPM1Q7Z4N2 1603 aa41.33■■■■■ 4.21
PABPN1-201ENST00000216727 BCORL1Q5H9F3 1711 aa41.31■■■■■ 4.2
PABPN1-201ENST00000216727 RGL3Q3MIN7 710 aa41.3■■■■■ 4.2
PABPN1-201ENST00000216727 SPHKAPQ2M3C7 1700 aa41.3■■■■■ 4.2
PABPN1-201ENST00000216727 RIMBP3CA6NJZ7 1639 aa41.29■■■■■ 4.2
PABPN1-201ENST00000216727 RIMBP3BA6NNM3 1639 aa41.29■■■■■ 4.2
PABPN1-201ENST00000216727 RIMBP3Q9UFD9 1639 aa41.29■■■■■ 4.2
PABPN1-201ENST00000216727 HECW2Q9P2P5 1572 aa41.28■■■■■ 4.2
PABPN1-201ENST00000216727 ROCK2O75116 1388 aaKnown RBP41.27■■■■■ 4.2
PABPN1-201ENST00000216727 CYB5RLQ6IPT4 315 aa41.26■■■■■ 4.2
PABPN1-201ENST00000216727 GPRASP1Q5JY77 1395 aa41.24■■■■■ 4.19
PABPN1-201ENST00000216727 MAP3K4Q9Y6R4 1608 aa41.24■■■■■ 4.19
PABPN1-201ENST00000216727 RNF17Q9BXT8 1623 aaKnown RBP41.23■■■■■ 4.19
PABPN1-201ENST00000216727 GLI2P10070 1586 aa41.23■■■■■ 4.19
PABPN1-201ENST00000216727 LAMC1P11047 1609 aa41.21■■■■■ 4.19
PABPN1-201ENST00000216727 CEP152O94986 1710 aa41.2■■■■■ 4.19
PABPN1-201ENST00000216727 LMTK2Q8IWU2 1503 aa41.2■■■■■ 4.19
PABPN1-201ENST00000216727 FRMPD1Q5SYB0 1578 aa41.17■■■■■ 4.18
PABPN1-201ENST00000216727 CLTCL1P53675 1640 aa41.16■■■■■ 4.18
PABPN1-201ENST00000216727 EFCAB6Q5THR3 1501 aa41.15■■■■■ 4.18
PABPN1-201ENST00000216727 NEURL4Q96JN8 1562 aa41.14■■■■■ 4.18
PABPN1-201ENST00000216727 STAC3Q96MF2 364 aa41.13■■■■■ 4.17
PABPN1-201ENST00000216727 ST20-MTHFSA0A0A6YYL1 179 aa41.12■■■■■ 4.17
PABPN1-201ENST00000216727 ABCA6Q8N139 1617 aa41.11■■■■■ 4.17
PABPN1-201ENST00000216727 PRKRIP1Q9H875 184 aaPredicted RBP41.09■■■■■ 4.17
PABPN1-201ENST00000216727 NBPF1Q3BBV0 1214 aa41.06■■■■■ 4.16
PABPN1-201ENST00000216727 PPRC1Q5VV67 1664 aaKnown RBP41.06■■■■■ 4.16
PABPN1-201ENST00000216727 RICTORQ6R327 1708 aa41.05■■■■■ 4.16
PABPN1-201ENST00000216727 RAPGEF3O95398 923 aa41.03■■■■■ 4.16
PABPN1-201ENST00000216727 MADDQ8WXG6 1647 aa41.02■■■■■ 4.16
PABPN1-201ENST00000216727 DIP2CQ9Y2E4 1556 aa40.98■■■■■ 4.15
PABPN1-201ENST00000216727 DIP2BQ9P265 1576 aa40.97■■■■■ 4.15
PABPN1-201ENST00000216727 POLR3GLQ9BT43 218 aa40.91■■■■■ 4.14
PABPN1-201ENST00000216727 KIF1BO60333 1816 aa40.89■■■■■ 4.14
PABPN1-201ENST00000216727 FAM69CQ0P6D2 419 aa40.88■■■■■ 4.14
PABPN1-201ENST00000216727 ABCC3O15438 1527 aa40.88■■■■■ 4.13
PABPN1-201ENST00000216727 UGGT1Q9NYU2 1555 aa40.88■■■■■ 4.13
PABPN1-201ENST00000216727 GGT6Q6P531 493 aa40.88■■■■■ 4.13
PABPN1-201ENST00000216727 NPATQ14207 1427 aa40.87■■■■■ 4.13
PABPN1-201ENST00000216727 MYOM2P54296 1465 aa40.84■■■■■ 4.13
PABPN1-201ENST00000216727 TESK2Q96S53 571 aa40.83■■■■■ 4.13
PABPN1-201ENST00000216727 COL17A1Q9UMD9 1497 aaPredicted RBP40.83■■■■■ 4.13
PABPN1-201ENST00000216727 KIAA1210Q9ULL0 1709 aa40.82■■■■■ 4.13
PABPN1-201ENST00000216727 ZMYM4Q5VZL5 1548 aa40.82■■■■■ 4.12
PABPN1-201ENST00000216727 WASHC2CQ9Y4E1 1318 aa40.81■■■■■ 4.12
PABPN1-201ENST00000216727 IQGAP1P46940 1657 aa40.8■■■■■ 4.12
PABPN1-201ENST00000216727 YEATS2Q9ULM3 1422 aa40.78■■■■■ 4.12
PABPN1-201ENST00000216727 CCDC184Q52MB2 194 aa40.77■■■■■ 4.12
PABPN1-201ENST00000216727 CAMSAP1Q5T5Y3 1602 aa40.77■■■■■ 4.12
PABPN1-201ENST00000216727 IFT172Q9UG01 1749 aa40.77■■■■■ 4.12
PABPN1-201ENST00000216727 ADGRB3O60242 1522 aa40.76■■■■■ 4.12
PABPN1-201ENST00000216727 MROH2AA6NES4 1674 aa40.73■■■■■ 4.11
PABPN1-201ENST00000216727 ZC3H13Q5T200 1668 aaKnown RBP40.73■■■■■ 4.11
PABPN1-201ENST00000216727 MRS2Q9HD23 443 aa40.73■■■■■ 4.11
PABPN1-201ENST00000216727 SCAF11Q99590 1463 aaKnown RBP40.72■■■■■ 4.11
PABPN1-201ENST00000216727 ARHGAP31Q2M1Z3 1444 aa40.7■■■■■ 4.11
PABPN1-201ENST00000216727 DISP3Q9P2K9 1392 aa40.69■■■■■ 4.1
PABPN1-201ENST00000216727 NOS1P29475 1434 aa40.69■■■■■ 4.1
PABPN1-201ENST00000216727 NRXN1Q9ULB1 1477 aa40.69■■■■■ 4.1
PABPN1-201ENST00000216727 TMF1P82094 1093 aa40.69■■■■■ 4.1
PABPN1-201ENST00000216727 KTN1Q86UP2 1357 aaKnown RBP40.68■■■■■ 4.1
PABPN1-201ENST00000216727 HNRNPUQ00839 825 aaKnown RBP eCLIP40.64■■■■■ 4.1
PABPN1-201ENST00000216727 TSPOAP1O95153 1857 aa40.64■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms