RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
SNRPD3-201ENST00000215829 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
SNRPD3-201ENST00000215829 YEATS2Q9ULM3 1422 aa23.34■■□□□ 1.33
SNRPD3-201ENST00000215829 KIF3BO15066 747 aa23.32■■□□□ 1.32
SNRPD3-201ENST00000215829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.321e-8■■■□□ 17.8
SNRPD3-201ENST00000215829 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
SNRPD3-201ENST00000215829 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
SNRPD3-201ENST00000215829 IQGAP3Q86VI3 1631 aa23.28■■□□□ 1.32
SNRPD3-201ENST00000215829 ATP10AO60312 1499 aa23.27■■□□□ 1.32
SNRPD3-201ENST00000215829 PKD2Q13563 968 aa23.27■■□□□ 1.32
SNRPD3-201ENST00000215829 FOXD1Q16676 465 aa23.27■■□□□ 1.32
SNRPD3-201ENST00000215829 BCORL1Q5H9F3 1711 aa23.26■■□□□ 1.31
SNRPD3-201ENST00000215829 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
SNRPD3-201ENST00000215829 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
SNRPD3-201ENST00000215829 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
SNRPD3-201ENST00000215829 KANK1Q14678 1352 aa23.23■■□□□ 1.31
SNRPD3-201ENST00000215829 MROH1Q8NDA8 1641 aa23.23■■□□□ 1.31
SNRPD3-201ENST00000215829 PRDM15P57071 1507 aaPredicted RBP23.22■■□□□ 1.31
SNRPD3-201ENST00000215829 REREQ9P2R6 1566 aa23.22■■□□□ 1.31
SNRPD3-201ENST00000215829 VWDEQ8N2E2 1590 aa23.21■■□□□ 1.31
SNRPD3-201ENST00000215829 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
SNRPD3-201ENST00000215829 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
SNRPD3-201ENST00000215829 GGT6Q6P531 493 aa23.17■■□□□ 1.3
SNRPD3-201ENST00000215829 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
SNRPD3-201ENST00000215829 AGLP35573 1532 aa23.16■■□□□ 1.3
SNRPD3-201ENST00000215829 TET3O43151 1660 aa23.13■■□□□ 1.29
SNRPD3-201ENST00000215829 LMTK2Q8IWU2 1503 aa23.13■■□□□ 1.29
SNRPD3-201ENST00000215829 E9PCH4 1651 aa23.1■■□□□ 1.29
SNRPD3-201ENST00000215829 WASHC2CQ9Y4E1 1318 aa23.09■■□□□ 1.29
SNRPD3-201ENST00000215829 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
SNRPD3-201ENST00000215829 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
SNRPD3-201ENST00000215829 CEP152O94986 1710 aa23.08■■□□□ 1.29
SNRPD3-201ENST00000215829 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
SNRPD3-201ENST00000215829 ABCC3O15438 1527 aa23.07■■□□□ 1.28
SNRPD3-201ENST00000215829 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
SNRPD3-201ENST00000215829 PLA2R1Q13018 1463 aa23.06■■□□□ 1.28
SNRPD3-201ENST00000215829 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
SNRPD3-201ENST00000215829 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
SNRPD3-201ENST00000215829 PTPRTO14522 1441 aa23.02■■□□□ 1.28
SNRPD3-201ENST00000215829 CCDC144AA2RUR9 1427 aa23.01■■□□□ 1.27
SNRPD3-201ENST00000215829 CAMSAP1Q5T5Y3 1602 aa22.99■■□□□ 1.27
SNRPD3-201ENST00000215829 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
SNRPD3-201ENST00000215829 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
SNRPD3-201ENST00000215829 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
SNRPD3-201ENST00000215829 NPATQ14207 1427 aa22.98■■□□□ 1.27
SNRPD3-201ENST00000215829 MLECQ14165 292 aa22.98■■□□□ 1.27
SNRPD3-201ENST00000215829 TRPM2O94759 1503 aa22.98■■□□□ 1.27
SNRPD3-201ENST00000215829 ARHGAP31Q2M1Z3 1444 aa22.98■■□□□ 1.27
SNRPD3-201ENST00000215829 L3MBTL2Q969R5 705 aa22.96■■□□□ 1.27
SNRPD3-201ENST00000215829 CLTCQ00610 1675 aaKnown RBP22.91■■□□□ 1.26
SNRPD3-201ENST00000215829 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
SNRPD3-201ENST00000215829 CNTLNQ9NXG0 1405 aa22.89■■□□□ 1.26
SNRPD3-201ENST00000215829 ESF1Q9H501 851 aaKnown RBP22.89■■□□□ 1.26
SNRPD3-201ENST00000215829 CLTCL1P53675 1640 aa22.89■■□□□ 1.25
SNRPD3-201ENST00000215829 NOS1P29475 1434 aa22.89■■□□□ 1.25
SNRPD3-201ENST00000215829 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
SNRPD3-201ENST00000215829 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
SNRPD3-201ENST00000215829 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.25
SNRPD3-201ENST00000215829 ZMYM3Q14202 1370 aa22.83■■□□□ 1.25
SNRPD3-201ENST00000215829 RGL3Q3MIN7 710 aa22.83■■□□□ 1.24
SNRPD3-201ENST00000215829 SYNMO15061 1565 aa22.81■■□□□ 1.24
SNRPD3-201ENST00000215829 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
SNRPD3-201ENST00000215829 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
SNRPD3-201ENST00000215829 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
SNRPD3-201ENST00000215829 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
SNRPD3-201ENST00000215829 KIF1BO60333 1816 aa22.8■■□□□ 1.24
SNRPD3-201ENST00000215829 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
SNRPD3-201ENST00000215829 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
SNRPD3-201ENST00000215829 MROH2AA6NES4 1674 aa22.78■■□□□ 1.24
SNRPD3-201ENST00000215829 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
SNRPD3-201ENST00000215829 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.23
SNRPD3-201ENST00000215829 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
SNRPD3-201ENST00000215829 UHRF1BP1Q6BDS2 1440 aa22.76■■□□□ 1.23
SNRPD3-201ENST00000215829 FER1L4A9Z1Z3 1794 aa22.75■■□□□ 1.23
SNRPD3-201ENST00000215829 IDI1Q13907 227 aa22.75■■□□□ 1.23
SNRPD3-201ENST00000215829 ADGRB3O60242 1522 aa22.73■■□□□ 1.23
SNRPD3-201ENST00000215829 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
SNRPD3-201ENST00000215829 CHGAP10645 457 aaKnown RBP22.71■■□□□ 1.23
SNRPD3-201ENST00000215829 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
SNRPD3-201ENST00000215829 ZNF316A6NFI3 1004 aaPredicted RBP22.68■■□□□ 1.22
SNRPD3-201ENST00000215829 PRAG1Q86YV5 1406 aa22.68■■□□□ 1.22
SNRPD3-201ENST00000215829 C3P01024 1663 aa22.67■■□□□ 1.22
SNRPD3-201ENST00000215829 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
SNRPD3-201ENST00000215829 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
SNRPD3-201ENST00000215829 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
SNRPD3-201ENST00000215829 CEBPAP49715 358 aaPredicted RBP22.66■■□□□ 1.22
SNRPD3-201ENST00000215829 TNRQ92752 1358 aa22.65■■□□□ 1.22
SNRPD3-201ENST00000215829 TMEM131LA2VDJ0 1609 aa22.65■■□□□ 1.22
SNRPD3-201ENST00000215829 IFT172Q9UG01 1749 aa22.64■■□□□ 1.21
SNRPD3-201ENST00000215829 RALGAPBQ86X10 1494 aa22.63■■□□□ 1.21
SNRPD3-201ENST00000215829 MYOM2P54296 1465 aa22.62■■□□□ 1.21
SNRPD3-201ENST00000215829 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
SNRPD3-201ENST00000215829 STAG3Q9UJ98 1225 aa22.61■■□□□ 1.21
SNRPD3-201ENST00000215829 PPLO60437 1756 aa22.6■■□□□ 1.21
SNRPD3-201ENST00000215829 MYO5BQ9ULV0 1848 aa22.6■■□□□ 1.21
SNRPD3-201ENST00000215829 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
SNRPD3-201ENST00000215829 NEXMIFQ5QGS0 1516 aa22.57■■□□□ 1.2
SNRPD3-201ENST00000215829 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
SNRPD3-201ENST00000215829 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
SNRPD3-201ENST00000215829 NLRP1Q9C000 1473 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms